RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 NSFL1CQ9UNZ2 370 aaKnown RBP10.91□□□□□ -0.66
SBNO1-203ENST00000602398 ZNF652Q9Y2D9 606 aa10.91□□□□□ -0.66
SBNO1-203ENST00000602398 H3BQV1 296 aa10.91□□□□□ -0.66
SBNO1-203ENST00000602398 GOLIM4O00461 696 aa10.91□□□□□ -0.66
SBNO1-203ENST00000602398 IFFO2Q5TF58 517 aa10.91□□□□□ -0.66
SBNO1-203ENST00000602398 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
SBNO1-203ENST00000602398 RPGRQ92834 1020 aaKnown RBP10.9□□□□□ -0.66
SBNO1-203ENST00000602398 MINDY4BA8MYZ0 360 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 CEBPZQ03701 1054 aaKnown RBP10.9□□□□□ -0.66
SBNO1-203ENST00000602398 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 CLTCL1P53675 1640 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 KCNQ2O43526 872 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 HAND2P61296 217 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 TIMM10P62072 90 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
SBNO1-203ENST00000602398 RTCBQ9Y3I0 505 aaKnown RBP10.9□□□□□ -0.66
SBNO1-203ENST00000602398 USP19O94966 1318 aa10.9□□□□□ -0.67
SBNO1-203ENST00000602398 HSPA1LP34931 641 aa10.9□□□□□ -0.67
SBNO1-203ENST00000602398 RPAP2Q8IXW5 612 aaPredicted RBP10.9□□□□□ -0.67
SBNO1-203ENST00000602398 MX1P20591 662 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 SLC52A2Q9HAB3 445 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 PCDH11XQ9BZA7 1347 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 PCDH11YQ9BZA8 1340 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 GRM8O00222 908 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 EIF5BO60841 1220 aaKnown RBP10.89□□□□□ -0.67
SBNO1-203ENST00000602398 ABCA9Q8IUA7 1624 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 IFIT1P09914 478 aaKnown RBP10.89□□□□□ -0.67
SBNO1-203ENST00000602398 PHKG2P15735 406 aa10.89□□□□□ -0.67
SBNO1-203ENST00000602398 KSR2Q6VAB6 950 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 ERBB3P21860 1342 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 MARCH6O60337 910 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 CT47B1P0C2W7 299 aaPredicted RBP10.88□□□□□ -0.67
SBNO1-203ENST00000602398 TAF5LO75529 589 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 SF3A1Q15459 793 aaKnown RBP10.88□□□□□ -0.67
SBNO1-203ENST00000602398 PUS7Q96PZ0 661 aaKnown RBP10.88□□□□□ -0.67
SBNO1-203ENST00000602398 ANKRD18BA2A2Z9 1011 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 KIF1BPQ96EK5 621 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 ADGRL3Q9HAR2 1447 aa10.88□□□□□ -0.67
SBNO1-203ENST00000602398 CEP152O94986 1710 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 CHL1O00533 1208 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 NUP133Q8WUM0 1156 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 EIF2AK4Q9P2K8 1649 aaKnown RBP10.87□□□□□ -0.67
SBNO1-203ENST00000602398 USP6P35125 1406 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
SBNO1-203ENST00000602398 BICC1Q9H694 974 aaKnown RBP10.87□□□□□ -0.67
SBNO1-203ENST00000602398 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 SBNO2Q9Y2G9 1366 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 AKAP17AQ02040 695 aaKnown RBP10.87□□□□□ -0.67
SBNO1-203ENST00000602398 GRM1Q13255 1194 aa10.87□□□□□ -0.67
SBNO1-203ENST00000602398 IRS4O14654 1257 aaPredicted RBP10.86□□□□□ -0.67
SBNO1-203ENST00000602398 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
SBNO1-203ENST00000602398 TDO2P48775 406 aa10.86□□□□□ -0.67
SBNO1-203ENST00000602398 PIK3R4Q99570 1358 aa10.86□□□□□ -0.67
SBNO1-203ENST00000602398 PNMA6EA0A0J9YXQ4 647 aa10.86□□□□□ -0.67
SBNO1-203ENST00000602398 CYP27B1O15528 508 aa10.86□□□□□ -0.67
SBNO1-203ENST00000602398 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
SBNO1-203ENST00000602398 AMOTL1Q8IY63 956 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 ANP32EQ9BTT0 268 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 LRRC2Q9BYS8 371 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 ZBTB1Q9Y2K1 713 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 DIP2CQ9Y2E4 1556 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
SBNO1-203ENST00000602398 RNF20Q5VTR2 975 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 ERC1Q8IUD2 1116 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 DDX11Q96FC9 970 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
SBNO1-203ENST00000602398 ARHGEF10O15013 1369 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 EDC3Q96F86 508 aaKnown RBP10.85□□□□□ -0.67
SBNO1-203ENST00000602398 NLRP3Q96P20 1036 aa10.85□□□□□ -0.67
SBNO1-203ENST00000602398 SPATA31A3Q5VYP0 1347 aa10.84□□□□□ -0.67
SBNO1-203ENST00000602398 TRIM44Q96DX7 344 aaPredicted RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 GNL3LQ9NVN8 582 aaKnown RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 RNF17Q9BXT8 1623 aaKnown RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 GIGYF1O75420 1035 aaPredicted RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 JAKMIP1Q96N16 626 aaKnown RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 CLTCQ00610 1675 aaKnown RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 LRRFIP1Q32MZ4 808 aaKnown RBP10.84□□□□□ -0.67
SBNO1-203ENST00000602398 CCDC144CPQ8IYA2 1237 aa10.84□□□□□ -0.67
SBNO1-203ENST00000602398 LINS1Q8NG48 757 aa10.84□□□□□ -0.67
SBNO1-203ENST00000602398 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
SBNO1-203ENST00000602398 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
SBNO1-203ENST00000602398 ABCA6Q8N139 1617 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 SYNE4Q8N205 404 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 ERICH2A1L162 156 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 FERMT3Q86UX7 667 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 TEX13AQ9BXU3 409 aaPredicted RBP10.83□□□□□ -0.68
SBNO1-203ENST00000602398 SNAP23O00161 211 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 CAVIN4Q5BKX8 364 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 TRMT1LQ7Z2T5 733 aaKnown RBP10.83□□□□□ -0.68
SBNO1-203ENST00000602398 MIGA1Q8NAN2 632 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 PIGBQ92521 554 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.68
SBNO1-203ENST00000602398 PTPRCP08575 1304 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms