RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 SMTNL1A8MU46 457 aa11.88□□□□□ -0.51
HCG18-242ENST00000602319 ATP8B2P98198 1209 aa11.88□□□□□ -0.51
HCG18-242ENST00000602319 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
HCG18-242ENST00000602319 GNAI2P04899 355 aa11.87□□□□□ -0.51
HCG18-242ENST00000602319 SYT1P21579 422 aa11.87□□□□□ -0.51
HCG18-242ENST00000602319 DCTN1Q14203 1278 aa11.87□□□□□ -0.51
HCG18-242ENST00000602319 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.87□□□□□ -0.51
HCG18-242ENST00000602319 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
HCG18-242ENST00000602319 ELP1O95163 1332 aa11.87□□□□□ -0.51
HCG18-242ENST00000602319 A2ML1A8K2U0 1454 aa11.87□□□□□ -0.51
HCG18-242ENST00000602319 U2AF2P26368 475 aaKnown RBP eCLIP11.87□□□□□ -0.51
HCG18-242ENST00000602319 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.87□□□□□ -0.51
HCG18-242ENST00000602319 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
HCG18-242ENST00000602319 SNX14Q9Y5W7 946 aa11.87□□□□□ -0.51
HCG18-242ENST00000602319 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 MED1Q15648 1581 aaPredicted RBP11.86□□□□□ -0.51
HCG18-242ENST00000602319 RUFY3Q7L099 469 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 PLA2G4DQ86XP0 818 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 UNC5CLQ8IV45 518 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 DDX41Q9UJV9 622 aaKnown RBP11.86□□□□□ -0.51
HCG18-242ENST00000602319 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
HCG18-242ENST00000602319 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
HCG18-242ENST00000602319 CHAF1AQ13111 956 aaPredicted RBP11.86□□□□□ -0.51
HCG18-242ENST00000602319 NME9Q86XW9 330 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 ANO2Q9NQ90 1003 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 SGSM2O43147 1006 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 FGD1P98174 961 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.86□□□□□ -0.51
HCG18-242ENST00000602319 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
HCG18-242ENST00000602319 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
HCG18-242ENST00000602319 USP31Q70CQ4 1352 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 CDC25BP30305 580 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 MARF1Q9Y4F3 1742 aaKnown RBP11.85□□□□□ -0.51
HCG18-242ENST00000602319 FAM193AP78312 1265 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 FAM200AQ8TCP9 573 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 KCND1Q9NSA2 647 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 LIMCH1Q9UPQ0 1083 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 AK2P54819 239 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 AEBP1Q8IUX7 1158 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
HCG18-242ENST00000602319 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
HCG18-242ENST00000602319 MRVI1Q9Y6F6 885 aa11.85□□□□□ -0.51
HCG18-242ENST00000602319 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
HCG18-242ENST00000602319 ST3GAL1Q11201 340 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
HCG18-242ENST00000602319 KDRP35968 1356 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 SLFN14P0C7P3 912 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 G2E3Q7L622 706 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 EXOC6BQ9Y2D4 811 aa11.84□□□□□ -0.51
HCG18-242ENST00000602319 CCDC192P0DO97 292 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 TDRD7Q8NHU6 1098 aaKnown RBP11.83□□□□□ -0.52
HCG18-242ENST00000602319 PAXBP1Q9Y5B6 917 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 MAP3K5Q99683 1374 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 APBB1O00213 710 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 GNAI3P08754 354 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 POLA2Q14181 598 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 TTC21BQ7Z4L5 1316 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 MPNDQ8N594 471 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
HCG18-242ENST00000602319 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
HCG18-242ENST00000602319 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
HCG18-242ENST00000602319 PTGS1P23219 599 aa11.82□□□□□ -0.52
HCG18-242ENST00000602319 VPS53Q5VIR6 699 aa11.82□□□□□ -0.52
HCG18-242ENST00000602319 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
HCG18-242ENST00000602319 COG3Q96JB2 828 aa11.82□□□□□ -0.52
HCG18-242ENST00000602319 NWD1Q149M9 1564 aa11.82□□□□□ -0.52
HCG18-242ENST00000602319 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.82□□□□□ -0.52
HCG18-242ENST00000602319 LARGE1O95461 756 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 KIF18AQ8NI77 898 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
HCG18-242ENST00000602319 AGLP35573 1532 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 ZNF75DP51815 510 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 RBM6P78332 1123 aaKnown RBP11.81□□□□□ -0.52
HCG18-242ENST00000602319 ZSCAN25Q6NSZ9 544 aa11.81□□□□□ -0.52
HCG18-242ENST00000602319 NOL8Q76FK4 1167 aaKnown RBP11.81□□□□□ -0.52
HCG18-242ENST00000602319 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
HCG18-242ENST00000602319 ERBB3P21860 1342 aa11.8□□□□□ -0.52
HCG18-242ENST00000602319 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
HCG18-242ENST00000602319 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
HCG18-242ENST00000602319 TYRO3Q06418 890 aa11.8□□□□□ -0.52
HCG18-242ENST00000602319 MCM10Q7L590 875 aa11.8□□□□□ -0.52
HCG18-242ENST00000602319 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
HCG18-242ENST00000602319 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
HCG18-242ENST00000602319 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms