RNA–Protein interactions for RNA: ENST00000602212.5

NPAS1-208, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-208ENST00000602212 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
NPAS1-208ENST00000602212 FMNL2Q96PY5 1086 aa28.49■■■□□ 2.15
NPAS1-208ENST00000602212 SEC24BO95487 1268 aa28.49■■■□□ 2.15
NPAS1-208ENST00000602212 SNRPA1P09661 255 aaKnown RBP28.48■■■□□ 2.15
NPAS1-208ENST00000602212 PAPPAQ13219 1627 aa28.48■■■□□ 2.15
NPAS1-208ENST00000602212 TOGARAM1Q9Y4F4 1720 aa28.47■■■□□ 2.15
NPAS1-208ENST00000602212 LAMB4A4D0S4 1761 aa28.47■■■□□ 2.15
NPAS1-208ENST00000602212 UBR2Q8IWV8 1755 aa28.47■■■□□ 2.15
NPAS1-208ENST00000602212 LRRFIP2Q9Y608 721 aaKnown RBP28.47■■■□□ 2.15
NPAS1-208ENST00000602212 PLCH1Q4KWH8 1693 aa28.47■■■□□ 2.15
NPAS1-208ENST00000602212 UBTFL1P0CB47 393 aaPredicted RBP28.46■■■□□ 2.15
NPAS1-208ENST00000602212 KSR2Q6VAB6 950 aa28.46■■■□□ 2.15
NPAS1-208ENST00000602212 DISP2A7MBM2 1401 aa28.46■■■□□ 2.15
NPAS1-208ENST00000602212 MAP3K2Q9Y2U5 619 aa28.46■■■□□ 2.15
NPAS1-208ENST00000602212 USP16Q9Y5T5 823 aa28.45■■■□□ 2.14
NPAS1-208ENST00000602212 TOM1O60784 492 aa28.43■■■□□ 2.14
NPAS1-208ENST00000602212 PIP4K2BP78356 416 aa28.43■■■□□ 2.14
NPAS1-208ENST00000602212 ATP8B2P98198 1209 aa28.43■■■□□ 2.14
NPAS1-208ENST00000602212 PNMA6EA0A0J9YXQ4 647 aa28.42■■■□□ 2.14
NPAS1-208ENST00000602212 KCPQ6ZWJ8 1503 aa28.42■■■□□ 2.14
NPAS1-208ENST00000602212 BMP2KLQ5H9B9 411 aa28.42■■■□□ 2.14
NPAS1-208ENST00000602212 WNK3Q9BYP7 1800 aa28.41■■■□□ 2.14
NPAS1-208ENST00000602212 DDX58O95786 925 aaKnown RBP28.41■■■□□ 2.14
NPAS1-208ENST00000602212 NBPF7P0C2Y1 421 aaPredicted RBP28.41■■■□□ 2.14
NPAS1-208ENST00000602212 MYL6BP14649 208 aa28.41■■■□□ 2.14
NPAS1-208ENST00000602212 AIMP1Q12904 312 aaKnown RBP28.41■■■□□ 2.14
NPAS1-208ENST00000602212 ZBTB47Q9UFB7 747 aaPredicted RBP28.4■■■□□ 2.14
NPAS1-208ENST00000602212 NRAPQ86VF7 1730 aa28.4■■■□□ 2.14
NPAS1-208ENST00000602212 ADAMTS2O95450 1211 aa28.39■■■□□ 2.14
NPAS1-208ENST00000602212 LRP10Q7Z4F1 713 aa28.39■■■□□ 2.14
NPAS1-208ENST00000602212 APBB1O00213 710 aa28.39■■■□□ 2.13
NPAS1-208ENST00000602212 ALDH1L1O75891 902 aa28.39■■■□□ 2.13
NPAS1-208ENST00000602212 NOP58Q9Y2X3 529 aaKnown RBP28.39■■■□□ 2.13
NPAS1-208ENST00000602212 PLEKHM2Q8IWE5 1019 aa28.38■■■□□ 2.13
NPAS1-208ENST00000602212 TNS2Q63HR2 1409 aa28.38■■■□□ 2.13
NPAS1-208ENST00000602212 SMARCA5O60264 1052 aaPredicted RBP28.37■■■□□ 2.13
NPAS1-208ENST00000602212 C16orf71Q8IYS4 520 aaPredicted RBP28.37■■■□□ 2.13
NPAS1-208ENST00000602212 XAGE3Q8WTP9 111 aa28.37■■■□□ 2.13
NPAS1-208ENST00000602212 EXOC6BQ9Y2D4 811 aa28.36■■■□□ 2.13
NPAS1-208ENST00000602212 CWF19L2Q2TBE0 894 aaKnown RBP28.36■■■□□ 2.13
NPAS1-208ENST00000602212 COPS6Q7L5N1 327 aa28.36■■■□□ 2.13
NPAS1-208ENST00000602212 PIP4K2AP48426 406 aaPredicted RBP28.35■■■□□ 2.13
NPAS1-208ENST00000602212 LINS1Q8NG48 757 aa28.35■■■□□ 2.13
NPAS1-208ENST00000602212 DDRGK1Q96HY6 314 aa28.35■■■□□ 2.13
NPAS1-208ENST00000602212 RIC3Q7Z5B4 369 aa28.34■■■□□ 2.13
NPAS1-208ENST00000602212 SSH3Q8TE77 659 aa28.34■■■□□ 2.13
NPAS1-208ENST00000602212 BCL11AQ9H165 835 aa28.34■■■□□ 2.13
NPAS1-208ENST00000602212 OTUD7AQ8TE49 926 aaPredicted RBP28.34■■■□□ 2.13
NPAS1-208ENST00000602212 TMOD3Q9NYL9 352 aa28.34■■■□□ 2.13
NPAS1-208ENST00000602212 UPF2Q9HAU5 1272 aaKnown RBP28.33■■■□□ 2.13
NPAS1-208ENST00000602212 IBTKQ9P2D0 1353 aaPredicted RBP28.32■■■□□ 2.12
NPAS1-208ENST00000602212 ITGB4P16144 1822 aa28.32■■■□□ 2.12
NPAS1-208ENST00000602212 PPP1R42Q7Z4L9 355 aa28.32■■■□□ 2.12
NPAS1-208ENST00000602212 C9orf78Q9NZ63 289 aaPredicted RBP28.32■■■□□ 2.12
NPAS1-208ENST00000602212 NUTM2BA6NNL0 878 aaPredicted RBP28.31■■■□□ 2.12
NPAS1-208ENST00000602212 NUTM2EB1AL46 878 aaPredicted RBP28.31■■■□□ 2.12
NPAS1-208ENST00000602212 POLA2Q14181 598 aa28.31■■■□□ 2.12
NPAS1-208ENST00000602212 NUTM2AQ8IVF1 878 aaPredicted RBP28.31■■■□□ 2.12
NPAS1-208ENST00000602212 ERBB4Q15303 1308 aa28.31■■■□□ 2.12
NPAS1-208ENST00000602212 PTCD1O75127 700 aaKnown RBP28.31■■■□□ 2.12
NPAS1-208ENST00000602212 UBAP1LF5GYI3 381 aa28.3■■■□□ 2.12
NPAS1-208ENST00000602212 GSPT1P15170 499 aaKnown RBP28.3■■■□□ 2.12
NPAS1-208ENST00000602212 ERICH6Q7L0X2 663 aa28.3■■■□□ 2.12
NPAS1-208ENST00000602212 ARFGEF2Q9Y6D5 1785 aa28.3■■■□□ 2.12
NPAS1-208ENST00000602212 LRP6O75581 1613 aa28.3■■■□□ 2.12
NPAS1-208ENST00000602212 IGKV5-2P06315 115 aa28.3■■■□□ 2.12
NPAS1-208ENST00000602212 TTC22Q5TAA0 569 aa28.29■■■□□ 2.12
NPAS1-208ENST00000602212 ANKRD13DQ6ZTN6 518 aa28.29■■■□□ 2.12
NPAS1-208ENST00000602212 LRRCC1Q9C099 1032 aa28.29■■■□□ 2.12
NPAS1-208ENST00000602212 NWD2Q9ULI1 1742 aa28.29■■■□□ 2.12
NPAS1-208ENST00000602212 SPATA31A1Q5TZJ5 1347 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 NBPF26B4DH59 902 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 SRGAP3O43295 1099 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 NBPF10Q6P3W6 841 aaKnown RBP28.28■■■□□ 2.12
NPAS1-208ENST00000602212 NBPF15Q8N660 670 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 TBC1D32Q96NH3 1257 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 METTL22Q9BUU2 404 aaPredicted RBP28.28■■■□□ 2.12
NPAS1-208ENST00000602212 UTYO14607 1347 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 GRM8O00222 908 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 EXOC5O00471 708 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 PIGBQ92521 554 aa28.28■■■□□ 2.12
NPAS1-208ENST00000602212 NEXNQ0ZGT2 675 aa28.27■■■□□ 2.12
NPAS1-208ENST00000602212 NEURL1BA8MQ27 555 aa28.26■■■□□ 2.11
NPAS1-208ENST00000602212 MFAP1P55081 439 aaKnown RBP28.26■■■□□ 2.11
NPAS1-208ENST00000602212 MTX1Q13505 466 aa28.25■■■□□ 2.11
NPAS1-208ENST00000602212 MYD88Q99836 296 aa28.25■■■□□ 2.11
NPAS1-208ENST00000602212 SLIT2O94813 1529 aa28.25■■■□□ 2.11
NPAS1-208ENST00000602212 ASAP1Q9ULH1 1129 aa28.25■■■□□ 2.11
NPAS1-208ENST00000602212 HDAC5Q9UQL6 1122 aa28.25■■■□□ 2.11
NPAS1-208ENST00000602212 THRAP3Q9Y2W1 955 aaKnown RBP28.25■■■□□ 2.11
NPAS1-208ENST00000602212 CDCA7Q9BWT1 371 aaPredicted RBP28.24■■■□□ 2.11
NPAS1-208ENST00000602212 AFDNP55196 1824 aaKnown RBP28.24■■■□□ 2.11
NPAS1-208ENST00000602212 A1BGP04217 495 aa28.23■■■□□ 2.11
NPAS1-208ENST00000602212 BCL9O00512 1426 aa28.23■■■□□ 2.11
NPAS1-208ENST00000602212 SALL3Q9BXA9 1300 aa28.23■■■□□ 2.11
NPAS1-208ENST00000602212 SURF6O75683 361 aaKnown RBP28.22■■■□□ 2.11
NPAS1-208ENST00000602212 GCKRQ14397 625 aa28.22■■■□□ 2.11
NPAS1-208ENST00000602212 TBC1D9Q6ZT07 1266 aa28.22■■■□□ 2.11
NPAS1-208ENST00000602212 PLBD2Q8NHP8 589 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms