RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 SFI1A8K8P3 1242 aa7.71□□□□□ -1.18
VRK3-222ENST00000601324 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
VRK3-222ENST00000601324 INHAP05111 366 aa7.71□□□□□ -1.18
VRK3-222ENST00000601324 SMCPP49901 116 aaPredicted RBP7.71□□□□□ -1.18
VRK3-222ENST00000601324 RELBQ01201 579 aa7.71□□□□□ -1.18
VRK3-222ENST00000601324 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
VRK3-222ENST00000601324 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
VRK3-222ENST00000601324 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
VRK3-222ENST00000601324 MAGI3Q5TCQ9 1506 aa7.71□□□□□ -1.18
VRK3-222ENST00000601324 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 BACH1O14867 736 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
VRK3-222ENST00000601324 CLN3Q13286 438 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 SWI5Q1ZZU3 235 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 CRIPAKQ8N1N5 446 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 XAGE2Q96GT9 111 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 TSEN34Q9BSV6 310 aaKnown RBP7.7□□□□□ -1.18
VRK3-222ENST00000601324 TRAIPQ9BWF2 469 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 CUL7Q14999 1698 aa7.7□□□□□ -1.18
VRK3-222ENST00000601324 DISP1Q96F81 1524 aa7.69□□□□□ -1.18
VRK3-222ENST00000601324 PCF11O94913 1555 aaKnown RBP7.69□□□□□ -1.18
VRK3-222ENST00000601324 IL2RAP01589 272 aa7.69□□□□□ -1.18
VRK3-222ENST00000601324 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
VRK3-222ENST00000601324 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
VRK3-222ENST00000601324 ESYT1Q9BSJ8 1104 aa7.69□□□□□ -1.18
VRK3-222ENST00000601324 IRX2Q9BZI1 471 aaPredicted RBP7.69□□□□□ -1.18
VRK3-222ENST00000601324 UPP2O95045 317 aa7.68□□□□□ -1.18
VRK3-222ENST00000601324 TSEN2Q8NCE0 465 aaKnown RBP7.68□□□□□ -1.18
VRK3-222ENST00000601324 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
VRK3-222ENST00000601324 SLC4A9Q96Q91 983 aa7.68□□□□□ -1.18
VRK3-222ENST00000601324 ZNF395Q9H8N7 513 aaPredicted RBP7.68□□□□□ -1.18
VRK3-222ENST00000601324 SERTAD1Q9UHV2 236 aa7.68□□□□□ -1.18
VRK3-222ENST00000601324 HRH3Q9Y5N1 445 aa7.68□□□□□ -1.18
VRK3-222ENST00000601324 KIF21BO75037 1637 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 CARNS1A5YM72 827 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 MEN1O00255 615 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 AXIN1O15169 862 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 SPINT1O43278 529 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 MRPL14Q6P1L8 145 aaKnown RBP7.67□□□□□ -1.18
VRK3-222ENST00000601324 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 DISP3Q9P2K9 1392 aa7.67□□□□□ -1.18
VRK3-222ENST00000601324 SMTNP53814 917 aa7.66□□□□□ -1.18
VRK3-222ENST00000601324 EPHA4P54764 986 aa7.66□□□□□ -1.18
VRK3-222ENST00000601324 TLR1Q15399 786 aa7.66□□□□□ -1.18
VRK3-222ENST00000601324 HINFPQ9BQA5 517 aa7.66□□□□□ -1.18
VRK3-222ENST00000601324 WDR7Q9Y4E6 1490 aa7.66□□□□□ -1.18
VRK3-222ENST00000601324 ARAP3Q8WWN8 1544 aa7.66□□□□□ -1.18
VRK3-222ENST00000601324 ZCCHC11Q5TAX3 1644 aaKnown RBP7.66□□□□□ -1.18
VRK3-222ENST00000601324 A6NJY4 79 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 BMP2P12643 396 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 BMP1P13497 986 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 GPC1P35052 558 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 CENPCQ03188 943 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 SCARF1Q14162 830 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 MTFR1Q15390 333 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 CARMIL2Q6F5E8 1435 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 TNS4Q8IZW8 715 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 SLAIN2Q9P270 581 aa7.65□□□□□ -1.18
VRK3-222ENST00000601324 CD109Q6YHK3 1445 aa7.64□□□□□ -1.19
VRK3-222ENST00000601324 FOXK2Q01167 660 aa7.64□□□□□ -1.19
VRK3-222ENST00000601324 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
VRK3-222ENST00000601324 B4GALNT3Q6L9W6 998 aa7.64□□□□□ -1.19
VRK3-222ENST00000601324 TRIM46Q7Z4K8 759 aa7.64□□□□□ -1.19
VRK3-222ENST00000601324 INSM2Q96T92 566 aaPredicted RBP7.64□□□□□ -1.19
VRK3-222ENST00000601324 FHDC1Q9C0D6 1143 aaPredicted RBP7.64□□□□□ -1.19
VRK3-222ENST00000601324 AAASQ9NRG9 546 aa7.64□□□□□ -1.19
VRK3-222ENST00000601324 ST8SIA5O15466 376 aa7.63□□□□□ -1.19
VRK3-222ENST00000601324 WEE1P30291 646 aa7.63□□□□□ -1.19
VRK3-222ENST00000601324 RNF144AP50876 292 aaPredicted RBP7.63□□□□□ -1.19
VRK3-222ENST00000601324 NBPF15Q8N660 670 aa7.63□□□□□ -1.19
VRK3-222ENST00000601324 PURBQ96QR8 312 aaKnown RBP7.63□□□□□ -1.19
VRK3-222ENST00000601324 POLMQ9NP87 494 aaPredicted RBP7.63□□□□□ -1.19
VRK3-222ENST00000601324 SCHIP1Q9P0W5 487 aaPredicted RBP7.63□□□□□ -1.19
VRK3-222ENST00000601324 CDK2AP1O14519 115 aa7.62□□□□□ -1.19
VRK3-222ENST00000601324 PRMT3O60678 531 aa7.62□□□□□ -1.19
VRK3-222ENST00000601324 LGR5O75473 907 aa7.62□□□□□ -1.19
VRK3-222ENST00000601324 ATP2B4P23634 1241 aa7.62□□□□□ -1.19
VRK3-222ENST00000601324 CTSOP43234 321 aaPredicted RBP7.62□□□□□ -1.19
VRK3-222ENST00000601324 OCLNQ16625 522 aa7.62□□□□□ -1.19
VRK3-222ENST00000601324 FOXD4L5Q5VV16 416 aaPredicted RBP7.62□□□□□ -1.19
VRK3-222ENST00000601324 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
VRK3-222ENST00000601324 BCORL1Q5H9F3 1711 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 CFAP43Q8NDM7 1665 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 BRD1O95696 1058 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 IGFBP4P22692 258 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 SSFA2P28290 1259 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 HSPA2P54652 639 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 PPARGC1BQ86YN6 1023 aaKnown RBP7.61□□□□□ -1.19
VRK3-222ENST00000601324 SLC9A9Q8IVB4 645 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 GAS2L2Q8NHY3 880 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
VRK3-222ENST00000601324 GRIP2Q9C0E4 1043 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 ATP13A2Q9NQ11 1180 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 CXXC1Q9P0U4 656 aaPredicted RBP7.61□□□□□ -1.19
VRK3-222ENST00000601324 IQSEC3Q9UPP2 1182 aaPredicted RBP7.61□□□□□ -1.19
VRK3-222ENST00000601324 IQGAP2Q13576 1575 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 UGGT2Q9NYU1 1516 aa7.61□□□□□ -1.19
VRK3-222ENST00000601324 CARMIL1Q5VZK9 1371 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms