RNA–Protein interactions for RNA: ENST00000601267.5

C19orf48-213, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-213ENST00000601267 TM4SF1P30408 202 aa16.68■□□□□ 0.26
C19orf48-213ENST00000601267 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
C19orf48-213ENST00000601267 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
C19orf48-213ENST00000601267 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
C19orf48-213ENST00000601267 COL15A1P39059 1388 aa16.67■□□□□ 0.26
C19orf48-213ENST00000601267 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
C19orf48-213ENST00000601267 COL13A1Q5TAT6 717 aaPredicted RBP16.67■□□□□ 0.26
C19orf48-213ENST00000601267 SMC1BQ8NDV3 1235 aa16.67■□□□□ 0.26
C19orf48-213ENST00000601267 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
C19orf48-213ENST00000601267 IL13P35225 146 aa16.66■□□□□ 0.26
C19orf48-213ENST00000601267 NFIXQ14938 502 aa16.66■□□□□ 0.26
C19orf48-213ENST00000601267 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
C19orf48-213ENST00000601267 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
C19orf48-213ENST00000601267 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
C19orf48-213ENST00000601267 CYP19A1P11511 503 aaPredicted RBP16.65■□□□□ 0.26
C19orf48-213ENST00000601267 JMYQ8N9B5 988 aa16.65■□□□□ 0.26
C19orf48-213ENST00000601267 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
C19orf48-213ENST00000601267 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
C19orf48-213ENST00000601267 DLEC1Q9Y238 1755 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 SERPINB2P05120 415 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 HMOX1P09601 288 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 LMNB1P20700 586 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 C2CD5Q86YS7 1000 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
C19orf48-213ENST00000601267 MRC1P22897 1456 aa16.63■□□□□ 0.25
C19orf48-213ENST00000601267 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
C19orf48-213ENST00000601267 RNMTO43148 476 aaKnown RBP16.63■□□□□ 0.25
C19orf48-213ENST00000601267 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
C19orf48-213ENST00000601267 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
C19orf48-213ENST00000601267 PRELPP51888 382 aa16.62■□□□□ 0.25
C19orf48-213ENST00000601267 TNS4Q8IZW8 715 aa16.62■□□□□ 0.25
C19orf48-213ENST00000601267 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
C19orf48-213ENST00000601267 CCDC88AQ3V6T2 1871 aa16.62■□□□□ 0.25
C19orf48-213ENST00000601267 ZC3H4Q9UPT8 1303 aaKnown RBP16.62■□□□□ 0.25
C19orf48-213ENST00000601267 GLTPD2A6NH11 291 aa16.61■□□□□ 0.25
C19orf48-213ENST00000601267 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
C19orf48-213ENST00000601267 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
C19orf48-213ENST00000601267 H0YIN7 160 aa16.6■□□□□ 0.25
C19orf48-213ENST00000601267 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
C19orf48-213ENST00000601267 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
C19orf48-213ENST00000601267 PCNTO95613 3336 aa16.6■□□□□ 0.25
C19orf48-213ENST00000601267 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
C19orf48-213ENST00000601267 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
C19orf48-213ENST00000601267 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
C19orf48-213ENST00000601267 NFKBIEO00221 500 aa16.58■□□□□ 0.24
C19orf48-213ENST00000601267 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
C19orf48-213ENST00000601267 UBR2Q8IWV8 1755 aa16.57■□□□□ 0.24
C19orf48-213ENST00000601267 HSPA1AP0DMV8 641 aaKnown RBP16.57■□□□□ 0.24
C19orf48-213ENST00000601267 HSPA1BP0DMV9 641 aaKnown RBP16.57■□□□□ 0.24
C19orf48-213ENST00000601267 STARD3NLO95772 234 aa16.56■□□□□ 0.24
C19orf48-213ENST00000601267 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
C19orf48-213ENST00000601267 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
C19orf48-213ENST00000601267 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
C19orf48-213ENST00000601267 A0A087WZG4 1122 aa16.55■□□□□ 0.24
C19orf48-213ENST00000601267 NPHP1O15259 732 aa16.55■□□□□ 0.24
C19orf48-213ENST00000601267 C21orf2O43822 256 aa16.55■□□□□ 0.24
C19orf48-213ENST00000601267 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
C19orf48-213ENST00000601267 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
C19orf48-213ENST00000601267 DIEXFQ68CQ4 756 aaKnown RBP16.55■□□□□ 0.24
C19orf48-213ENST00000601267 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
C19orf48-213ENST00000601267 SCN7AQ01118 1682 aa16.55■□□□□ 0.24
C19orf48-213ENST00000601267 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
C19orf48-213ENST00000601267 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
C19orf48-213ENST00000601267 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
C19orf48-213ENST00000601267 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
C19orf48-213ENST00000601267 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
C19orf48-213ENST00000601267 PDE6BP35913 854 aa16.53■□□□□ 0.24
C19orf48-213ENST00000601267 EIF5P55010 431 aaKnown RBP16.53■□□□□ 0.24
C19orf48-213ENST00000601267 TEFQ10587 303 aa16.53■□□□□ 0.24
C19orf48-213ENST00000601267 POTECB2RU33 542 aa16.52■□□□□ 0.24
C19orf48-213ENST00000601267 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
C19orf48-213ENST00000601267 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
C19orf48-213ENST00000601267 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
C19orf48-213ENST00000601267 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
C19orf48-213ENST00000601267 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
C19orf48-213ENST00000601267 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
C19orf48-213ENST00000601267 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
C19orf48-213ENST00000601267 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
C19orf48-213ENST00000601267 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
C19orf48-213ENST00000601267 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
C19orf48-213ENST00000601267 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
C19orf48-213ENST00000601267 MKRN1Q9UHC7 482 aaKnown RBP16.5■□□□□ 0.23
C19orf48-213ENST00000601267 ZNF790Q6PG37 636 aa16.49■□□□□ 0.23
C19orf48-213ENST00000601267 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
C19orf48-213ENST00000601267 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
C19orf48-213ENST00000601267 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
C19orf48-213ENST00000601267 A1BGP04217 495 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 ST5P78524 1137 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
C19orf48-213ENST00000601267 TEX13AQ9BXU3 409 aaPredicted RBP16.48■□□□□ 0.23
C19orf48-213ENST00000601267 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
C19orf48-213ENST00000601267 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
C19orf48-213ENST00000601267 IL6STP40189 918 aaPredicted RBP16.47■□□□□ 0.23
C19orf48-213ENST00000601267 PRPF40BQ6NWY9 871 aaKnown RBP16.47■□□□□ 0.23
C19orf48-213ENST00000601267 IL17REQ8NFR9 667 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms