RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 IL25Q9H293 177 aa17.6■□□□□ 0.41
SMG9-211ENST00000601170 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
SMG9-211ENST00000601170 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
SMG9-211ENST00000601170 HOXB7P09629 217 aa17.6■□□□□ 0.41
SMG9-211ENST00000601170 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
SMG9-211ENST00000601170 CUL4AQ13619 759 aa17.6■□□□□ 0.41
SMG9-211ENST00000601170 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
SMG9-211ENST00000601170 KCNQ3O43525 872 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
SMG9-211ENST00000601170 CHAMP1Q96JM3 812 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 CCDC173Q0VFZ6 552 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 BEND3Q5T5X7 828 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 FOXD4L5Q5VV16 416 aaPredicted RBP17.59■□□□□ 0.41
SMG9-211ENST00000601170 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 FOXD4L4Q8WXT5 416 aaPredicted RBP17.59■□□□□ 0.41
SMG9-211ENST00000601170 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
SMG9-211ENST00000601170 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.41
SMG9-211ENST00000601170 PI4K2BQ8TCG2 481 aa17.58■□□□□ 0.41
SMG9-211ENST00000601170 IL17RAQ96F46 866 aa17.58■□□□□ 0.41
SMG9-211ENST00000601170 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.4
SMG9-211ENST00000601170 TEFQ10587 303 aa17.58■□□□□ 0.4
SMG9-211ENST00000601170 LRRC59Q96AG4 307 aaKnown RBP17.58■□□□□ 0.4
SMG9-211ENST00000601170 KIF1BPQ96EK5 621 aa17.58■□□□□ 0.4
SMG9-211ENST00000601170 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
SMG9-211ENST00000601170 ANXA1P04083 346 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 PSME1Q06323 249 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 AKAP4Q5JQC9 854 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
SMG9-211ENST00000601170 KCNH5Q8NCM2 988 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
SMG9-211ENST00000601170 PPP1R9BQ96SB3 815 aa17.57■□□□□ 0.4
SMG9-211ENST00000601170 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
SMG9-211ENST00000601170 BRD1O95696 1058 aa17.56■□□□□ 0.4
SMG9-211ENST00000601170 HSPA4P34932 840 aa17.56■□□□□ 0.4
SMG9-211ENST00000601170 ANP32BQ92688 251 aaKnown RBP17.56■□□□□ 0.4
SMG9-211ENST00000601170 CHMP4AQ9BY43 222 aa17.56■□□□□ 0.4
SMG9-211ENST00000601170 RBM27Q9P2N5 1060 aaKnown RBP17.56■□□□□ 0.4
SMG9-211ENST00000601170 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
SMG9-211ENST00000601170 ADCY9O60503 1353 aa17.55■□□□□ 0.4
SMG9-211ENST00000601170 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
SMG9-211ENST00000601170 ADGRL3Q9HAR2 1447 aa17.54■□□□□ 0.4
SMG9-211ENST00000601170 PXDNQ92626 1479 aa17.54■□□□□ 0.4
SMG9-211ENST00000601170 SGSM2O43147 1006 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 ANKLE2Q86XL3 938 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 RAD50Q92878 1312 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
SMG9-211ENST00000601170 HSP90AB4PQ58FF6 505 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 RBSNQ9H1K0 784 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
SMG9-211ENST00000601170 CRYBG1Q9Y4K1 1723 aa17.53■□□□□ 0.4
SMG9-211ENST00000601170 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
SMG9-211ENST00000601170 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.39
SMG9-211ENST00000601170 RNMTO43148 476 aaKnown RBP17.51■□□□□ 0.39
SMG9-211ENST00000601170 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
SMG9-211ENST00000601170 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
SMG9-211ENST00000601170 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
SMG9-211ENST00000601170 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
SMG9-211ENST00000601170 MBD3O95983 291 aa17.51■□□□□ 0.39
SMG9-211ENST00000601170 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
SMG9-211ENST00000601170 LSG1Q9H089 658 aaKnown RBP17.5■□□□□ 0.39
SMG9-211ENST00000601170 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
SMG9-211ENST00000601170 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
SMG9-211ENST00000601170 GCP02774 474 aa17.5■□□□□ 0.39
SMG9-211ENST00000601170 MTX1Q13505 466 aa17.5■□□□□ 0.39
SMG9-211ENST00000601170 SNX14Q9Y5W7 946 aa17.5■□□□□ 0.39
SMG9-211ENST00000601170 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
SMG9-211ENST00000601170 SYCE3A1L190 88 aa17.49■□□□□ 0.39
SMG9-211ENST00000601170 XPCQ01831 940 aaPredicted RBP17.49■□□□□ 0.39
SMG9-211ENST00000601170 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
SMG9-211ENST00000601170 LRSAM1Q6UWE0 723 aa17.49■□□□□ 0.39
SMG9-211ENST00000601170 CWC27Q6UX04 472 aaKnown RBP17.49■□□□□ 0.39
SMG9-211ENST00000601170 ARHGEF25Q86VW2 580 aa17.49■□□□□ 0.39
SMG9-211ENST00000601170 ZNF142P52746 1687 aaPredicted RBP17.49■□□□□ 0.39
SMG9-211ENST00000601170 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
SMG9-211ENST00000601170 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
SMG9-211ENST00000601170 SLIT3O75094 1523 aa17.48■□□□□ 0.39
SMG9-211ENST00000601170 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
SMG9-211ENST00000601170 CLASRPQ8N2M8 674 aaKnown RBP17.48■□□□□ 0.39
SMG9-211ENST00000601170 OVOS2A0A0G2JMS6 1433 aa17.48■□□□□ 0.39
SMG9-211ENST00000601170 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 ANKRD24Q8TF21 1146 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 ORAI2Q96SN7 254 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 KSR2Q6VAB6 950 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 TTC14Q96N46 770 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
SMG9-211ENST00000601170 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
SMG9-211ENST00000601170 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
SMG9-211ENST00000601170 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
SMG9-211ENST00000601170 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
SMG9-211ENST00000601170 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
SMG9-211ENST00000601170 HEG1Q9ULI3 1381 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms