RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 DDB1Q16531 1140 aa25.15■■□□□ 1.62
PNKP-214ENST00000600573 SMC5Q8IY18 1101 aa25.15■■□□□ 1.62
PNKP-214ENST00000600573 GCC1Q96CN9 775 aa25.15■■□□□ 1.62
PNKP-214ENST00000600573 LRP6O75581 1613 aa25.15■■□□□ 1.62
PNKP-214ENST00000600573 DNAAF4Q8WXU2 420 aa25.14■■□□□ 1.61
PNKP-214ENST00000600573 TEX13AQ9BXU3 409 aaPredicted RBP25.14■■□□□ 1.61
PNKP-214ENST00000600573 KSR2Q6VAB6 950 aa25.13■■□□□ 1.61
PNKP-214ENST00000600573 VSIG10Q8N0Z9 540 aa25.13■■□□□ 1.61
PNKP-214ENST00000600573 PDZRN3Q9UPQ7 1066 aa25.13■■□□□ 1.61
PNKP-214ENST00000600573 C8orf37Q96NL8 207 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 SRCIN1Q9C0H9 1055 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 CCDC9Q9Y3X0 531 aaKnown RBP25.12■■□□□ 1.61
PNKP-214ENST00000600573 ATP10DQ9P241 1426 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 WNK3Q9BYP7 1800 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 PRAMEF22A3QJZ6 481 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 PDIA6Q15084 440 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 FAM161AQ3B820 660 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
PNKP-214ENST00000600573 PI4KAP2A4QPH2 592 aa25.11■■□□□ 1.61
PNKP-214ENST00000600573 ANKRD44Q8N8A2 993 aa25.11■■□□□ 1.61
PNKP-214ENST00000600573 PI4KAP1Q8N8J0 262 aa25.11■■□□□ 1.61
PNKP-214ENST00000600573 IBTKQ9P2D0 1353 aaPredicted RBP25.1■■□□□ 1.61
PNKP-214ENST00000600573 GNAI2P04899 355 aa25.1■■□□□ 1.61
PNKP-214ENST00000600573 USP16Q9Y5T5 823 aa25.1■■□□□ 1.61
PNKP-214ENST00000600573 BCL9LQ86UU0 1499 aa25.09■■□□□ 1.61
PNKP-214ENST00000600573 ALDH1L1O75891 902 aa25.09■■□□□ 1.61
PNKP-214ENST00000600573 MEIS3Q99687 375 aa25.09■■□□□ 1.61
PNKP-214ENST00000600573 HMMRO75330 724 aa25.08■■□□□ 1.61
PNKP-214ENST00000600573 PIGBQ92521 554 aa25.08■■□□□ 1.61
PNKP-214ENST00000600573 PAPPAQ13219 1627 aa25.08■■□□□ 1.61
PNKP-214ENST00000600573 BEND3Q5T5X7 828 aa25.08■■□□□ 1.6
PNKP-214ENST00000600573 ANP32AP39687 249 aaKnown RBP25.07■■□□□ 1.6
PNKP-214ENST00000600573 C1orf115Q9H7X2 142 aa25.07■■□□□ 1.6
PNKP-214ENST00000600573 ADCY9O60503 1353 aa25.06■■□□□ 1.6
PNKP-214ENST00000600573 BCL9O00512 1426 aa25.06■■□□□ 1.6
PNKP-214ENST00000600573 PROSER3Q2NL68 480 aa25.06■■□□□ 1.6
PNKP-214ENST00000600573 USP21Q9UK80 565 aa25.06■■□□□ 1.6
PNKP-214ENST00000600573 KCPQ6ZWJ8 1503 aa25.06■■□□□ 1.6
PNKP-214ENST00000600573 UBR2Q8IWV8 1755 aa25.06■■□□□ 1.6
PNKP-214ENST00000600573 ANXA1P04083 346 aa25.05■■□□□ 1.6
PNKP-214ENST00000600573 CEP85Q6P2H3 762 aa25.05■■□□□ 1.6
PNKP-214ENST00000600573 SIRT2Q8IXJ6 389 aa25.05■■□□□ 1.6
PNKP-214ENST00000600573 MAP3K2Q9Y2U5 619 aa25.04■■□□□ 1.6
PNKP-214ENST00000600573 NUCB1Q02818 461 aa25.04■■□□□ 1.6
PNKP-214ENST00000600573 C8orf34Q49A92 452 aa25.04■■□□□ 1.6
PNKP-214ENST00000600573 MEX3CQ5U5Q3 659 aaKnown RBP25.04■■□□□ 1.6
PNKP-214ENST00000600573 USP44Q9H0E7 712 aa25.04■■□□□ 1.6
PNKP-214ENST00000600573 DCTPP1Q9H773 170 aa25.04■■□□□ 1.6
PNKP-214ENST00000600573 ATG3Q9NT62 314 aa25.04■■□□□ 1.6
PNKP-214ENST00000600573 C5P01031 1676 aa25.03■■□□□ 1.6
PNKP-214ENST00000600573 TOGARAM1Q9Y4F4 1720 aa25.03■■□□□ 1.6
PNKP-214ENST00000600573 UBTFL1P0CB47 393 aaPredicted RBP25.03■■□□□ 1.6
PNKP-214ENST00000600573 LINS1Q8NG48 757 aa25.03■■□□□ 1.6
PNKP-214ENST00000600573 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
PNKP-214ENST00000600573 NEXNQ0ZGT2 675 aa25.02■■□□□ 1.6
PNKP-214ENST00000600573 COPS6Q7L5N1 327 aa25.02■■□□□ 1.6
PNKP-214ENST00000600573 LRP10Q7Z4F1 713 aa25.02■■□□□ 1.6
PNKP-214ENST00000600573 RIC3Q7Z5B4 369 aa25.02■■□□□ 1.6
PNKP-214ENST00000600573 PTCD1O75127 700 aaKnown RBP25.01■■□□□ 1.59
PNKP-214ENST00000600573 MYL6BP14649 208 aa25.01■■□□□ 1.59
PNKP-214ENST00000600573 ANKRD13DQ6ZTN6 518 aa25.01■■□□□ 1.59
PNKP-214ENST00000600573 XAGE3Q8WTP9 111 aa25.01■■□□□ 1.59
PNKP-214ENST00000600573 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.01■■□□□ 1.59
PNKP-214ENST00000600573 GLI3P10071 1580 aa25.01■■□□□ 1.59
PNKP-214ENST00000600573 STARD3NLO95772 234 aa25.01■■□□□ 1.59
PNKP-214ENST00000600573 MARCH10Q8NA82 808 aaPredicted RBP25.01■■□□□ 1.59
PNKP-214ENST00000600573 ASAP1Q9ULH1 1129 aa25■■□□□ 1.59
PNKP-214ENST00000600573 PRIM1P49642 420 aaKnown RBP24.99■■□□□ 1.59
PNKP-214ENST00000600573 ATP8B2P98198 1209 aa24.99■■□□□ 1.59
PNKP-214ENST00000600573 AIMP1Q12904 312 aaKnown RBP24.99■■□□□ 1.59
PNKP-214ENST00000600573 CHD1LQ86WJ1 897 aa24.99■■□□□ 1.59
PNKP-214ENST00000600573 METTL22Q9BUU2 404 aaPredicted RBP24.98■■□□□ 1.59
PNKP-214ENST00000600573 FAM98CQ17RN3 349 aaKnown RBP24.97■■□□□ 1.59
PNKP-214ENST00000600573 PLBD2Q8NHP8 589 aa24.97■■□□□ 1.59
PNKP-214ENST00000600573 ZBTB47Q9UFB7 747 aaPredicted RBP24.97■■□□□ 1.59
PNKP-214ENST00000600573 SYTL4Q96C24 671 aaPredicted RBP24.96■■□□□ 1.59
PNKP-214ENST00000600573 C9orf78Q9NZ63 289 aaPredicted RBP24.96■■□□□ 1.59
PNKP-214ENST00000600573 ITGB4P16144 1822 aa24.95■■□□□ 1.58
PNKP-214ENST00000600573 ANKRD45Q5TZF3 282 aa24.95■■□□□ 1.58
PNKP-214ENST00000600573 UTYO14607 1347 aa24.95■■□□□ 1.58
PNKP-214ENST00000600573 NBPF26B4DH59 902 aa24.94■■□□□ 1.58
PNKP-214ENST00000600573 NBPF14Q5TI25 921 aa24.94■■□□□ 1.58
PNKP-214ENST00000600573 NBPF10Q6P3W6 841 aaKnown RBP24.94■■□□□ 1.58
PNKP-214ENST00000600573 NBPF15Q8N660 670 aa24.94■■□□□ 1.58
PNKP-214ENST00000600573 SMARCC1Q92922 1105 aaPredicted RBP24.94■■□□□ 1.58
PNKP-214ENST00000600573 RBM42Q9BTD8 480 aaKnown RBP24.94■■□□□ 1.58
PNKP-214ENST00000600573 TRPC5Q9UL62 973 aaPredicted RBP24.94■■□□□ 1.58
PNKP-214ENST00000600573 GJD4Q96KN9 370 aaPredicted RBP24.94■■□□□ 1.58
PNKP-214ENST00000600573 LRRFIP2Q9Y608 721 aaKnown RBP24.94■■□□□ 1.58
PNKP-214ENST00000600573 A1BGP04217 495 aa24.92■■□□□ 1.58
PNKP-214ENST00000600573 NPM2Q86SE8 214 aaKnown RBP24.92■■□□□ 1.58
PNKP-214ENST00000600573 AFF2P51816 1311 aa24.92■■□□□ 1.58
PNKP-214ENST00000600573 GRM8O00222 908 aa24.91■■□□□ 1.58
PNKP-214ENST00000600573 ONECUT3O60422 494 aaPredicted RBP24.91■■□□□ 1.58
PNKP-214ENST00000600573 DNAJC10Q8IXB1 793 aa24.91■■□□□ 1.58
PNKP-214ENST00000600573 NBPF7P0C2Y1 421 aaPredicted RBP24.9■■□□□ 1.58
PNKP-214ENST00000600573 SSH3Q8TE77 659 aa24.9■■□□□ 1.58
PNKP-214ENST00000600573 NEURL1BA8MQ27 555 aa24.9■■□□□ 1.58
PNKP-214ENST00000600573 IGKV5-2P06315 115 aa24.89■■□□□ 1.57
PNKP-214ENST00000600573 MTX1Q13505 466 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms