RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
HIF3A-218ENST00000600383 CHD1LQ86WJ1 897 aa18.98■□□□□ 0.63
HIF3A-218ENST00000600383 MAP3K2Q9Y2U5 619 aa18.98■□□□□ 0.63
HIF3A-218ENST00000600383 MRC1P22897 1456 aa18.98■□□□□ 0.63
HIF3A-218ENST00000600383 C8orf34Q49A92 452 aa18.98■□□□□ 0.63
HIF3A-218ENST00000600383 USP44Q9H0E7 712 aa18.98■□□□□ 0.63
HIF3A-218ENST00000600383 TMOD3Q9NYL9 352 aa18.97■□□□□ 0.63
HIF3A-218ENST00000600383 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
HIF3A-218ENST00000600383 KSR2Q6VAB6 950 aa18.96■□□□□ 0.63
HIF3A-218ENST00000600383 ATP10DQ9P241 1426 aa18.96■□□□□ 0.63
HIF3A-218ENST00000600383 ADCY9O60503 1353 aa18.96■□□□□ 0.62
HIF3A-218ENST00000600383 APBB1O00213 710 aa18.95■□□□□ 0.62
HIF3A-218ENST00000600383 UBTFL1P0CB47 393 aaPredicted RBP18.95■□□□□ 0.62
HIF3A-218ENST00000600383 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
HIF3A-218ENST00000600383 KAT6BQ8WYB5 2073 aa18.95■□□□□ 0.62
HIF3A-218ENST00000600383 DDX58O95786 925 aaKnown RBP18.95■□□□□ 0.62
HIF3A-218ENST00000600383 LRRFIP2Q9Y608 721 aaKnown RBP18.95■□□□□ 0.62
HIF3A-218ENST00000600383 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-218ENST00000600383 SPATA31A1Q5TZJ5 1347 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 HMMRO75330 724 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 XAGE3Q8WTP9 111 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 NGLY1Q96IV0 654 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
HIF3A-218ENST00000600383 SHANK3Q9BYB0 1731 aa18.93■□□□□ 0.62
HIF3A-218ENST00000600383 NBPF7P0C2Y1 421 aaPredicted RBP18.93■□□□□ 0.62
HIF3A-218ENST00000600383 PIGBQ92521 554 aa18.93■□□□□ 0.62
HIF3A-218ENST00000600383 ZBTB47Q9UFB7 747 aaPredicted RBP18.93■□□□□ 0.62
HIF3A-218ENST00000600383 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
HIF3A-218ENST00000600383 CERKQ8TCT0 537 aa18.92■□□□□ 0.62
HIF3A-218ENST00000600383 C5P01031 1676 aa18.92■□□□□ 0.62
HIF3A-218ENST00000600383 DISP2A7MBM2 1401 aa18.92■□□□□ 0.62
HIF3A-218ENST00000600383 CWF19L2Q2TBE0 894 aaKnown RBP18.92■□□□□ 0.62
HIF3A-218ENST00000600383 A0A0G2JS52 829 aa18.91■□□□□ 0.62
HIF3A-218ENST00000600383 DDB1Q16531 1140 aa18.91■□□□□ 0.62
HIF3A-218ENST00000600383 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
HIF3A-218ENST00000600383 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
HIF3A-218ENST00000600383 PLCH1Q4KWH8 1693 aa18.91■□□□□ 0.62
HIF3A-218ENST00000600383 PNMA6EA0A0J9YXQ4 647 aa18.91■□□□□ 0.62
HIF3A-218ENST00000600383 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
HIF3A-218ENST00000600383 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
HIF3A-218ENST00000600383 ATP8B2P98198 1209 aa18.89■□□□□ 0.62
HIF3A-218ENST00000600383 ANKRD13DQ6ZTN6 518 aa18.89■□□□□ 0.62
HIF3A-218ENST00000600383 JCADQ9P266 1359 aa18.89■□□□□ 0.61
HIF3A-218ENST00000600383 A1BGP04217 495 aa18.89■□□□□ 0.61
HIF3A-218ENST00000600383 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.61
HIF3A-218ENST00000600383 CDCA7Q9BWT1 371 aaPredicted RBP18.89■□□□□ 0.61
HIF3A-218ENST00000600383 SPATA31A5Q5VU36 1347 aa18.89■□□□□ 0.61
HIF3A-218ENST00000600383 SPATA31A7Q8IWB4 1347 aa18.89■□□□□ 0.61
HIF3A-218ENST00000600383 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
HIF3A-218ENST00000600383 NEXNQ0ZGT2 675 aa18.88■□□□□ 0.61
HIF3A-218ENST00000600383 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
HIF3A-218ENST00000600383 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
HIF3A-218ENST00000600383 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
HIF3A-218ENST00000600383 EXOC6BQ9Y2D4 811 aa18.88■□□□□ 0.61
HIF3A-218ENST00000600383 NBPF26B4DH59 902 aa18.87■□□□□ 0.61
HIF3A-218ENST00000600383 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
HIF3A-218ENST00000600383 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
HIF3A-218ENST00000600383 NBPF14Q5TI25 921 aa18.87■□□□□ 0.61
HIF3A-218ENST00000600383 NBPF10Q6P3W6 841 aaKnown RBP18.87■□□□□ 0.61
HIF3A-218ENST00000600383 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
HIF3A-218ENST00000600383 NBPF15Q8N660 670 aa18.87■□□□□ 0.61
HIF3A-218ENST00000600383 ATG3Q9NT62 314 aa18.87■□□□□ 0.61
HIF3A-218ENST00000600383 MYD88Q99836 296 aa18.86■□□□□ 0.61
HIF3A-218ENST00000600383 PPP1R42Q7Z4L9 355 aa18.86■□□□□ 0.61
HIF3A-218ENST00000600383 SLIT2O94813 1529 aa18.86■□□□□ 0.61
HIF3A-218ENST00000600383 TOGARAM1Q9Y4F4 1720 aa18.85■□□□□ 0.61
HIF3A-218ENST00000600383 SEC24BO95487 1268 aa18.85■□□□□ 0.61
HIF3A-218ENST00000600383 ZNF330Q9Y3S2 320 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-218ENST00000600383 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
HIF3A-218ENST00000600383 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
HIF3A-218ENST00000600383 METTL22Q9BUU2 404 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-218ENST00000600383 KCPQ6ZWJ8 1503 aa18.84■□□□□ 0.61
HIF3A-218ENST00000600383 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
HIF3A-218ENST00000600383 IGKV5-2P06315 115 aa18.84■□□□□ 0.61
HIF3A-218ENST00000600383 NRAPQ86VF7 1730 aa18.83■□□□□ 0.61
HIF3A-218ENST00000600383 GRM8O00222 908 aa18.83■□□□□ 0.6
HIF3A-218ENST00000600383 DNAJC10Q8IXB1 793 aa18.83■□□□□ 0.6
HIF3A-218ENST00000600383 MARCH10Q8NA82 808 aaPredicted RBP18.83■□□□□ 0.6
HIF3A-218ENST00000600383 TNS2Q63HR2 1409 aa18.83■□□□□ 0.6
HIF3A-218ENST00000600383 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 BARGINQ6ZT62 677 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
HIF3A-218ENST00000600383 N4BP2Q86UW6 1770 aaPredicted RBP18.82■□□□□ 0.6
HIF3A-218ENST00000600383 ERBB4Q15303 1308 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 NEURL1BA8MQ27 555 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 HSPA1LP34931 641 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 ARXQ96QS3 562 aa18.82■□□□□ 0.6
HIF3A-218ENST00000600383 BCL9O00512 1426 aa18.81■□□□□ 0.6
HIF3A-218ENST00000600383 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
HIF3A-218ENST00000600383 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
HIF3A-218ENST00000600383 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-218ENST00000600383 USP21Q9UK80 565 aa18.81■□□□□ 0.6
HIF3A-218ENST00000600383 UBR2Q8IWV8 1755 aa18.81■□□□□ 0.6
HIF3A-218ENST00000600383 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
HIF3A-218ENST00000600383 MEX3CQ5U5Q3 659 aaKnown RBP18.8■□□□□ 0.6
HIF3A-218ENST00000600383 TEX13AQ9BXU3 409 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms