RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 PIM2Q9P1W9 311 aa13.65□□□□□ -0.22
LSP1P1-201ENST00000599825 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
LSP1P1-201ENST00000599825 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
LSP1P1-201ENST00000599825 NFIXQ14938 502 aa13.64□□□□□ -0.23
LSP1P1-201ENST00000599825 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
LSP1P1-201ENST00000599825 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
LSP1P1-201ENST00000599825 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
LSP1P1-201ENST00000599825 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 KCNA3P22001 575 aa13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 IL17REQ8NFR9 667 aa13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 ZNF496Q96IT1 587 aaPredicted RBP13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 UBR2Q8IWV8 1755 aa13.63□□□□□ -0.23
LSP1P1-201ENST00000599825 CARMIL3Q8ND23 1372 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 KCNQ3O43525 872 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 RASSF7Q02833 373 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 NMRK2Q9NPI5 230 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 RNF181Q9P0P0 153 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
LSP1P1-201ENST00000599825 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 KIF3CO14782 793 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 NPHP1O15259 732 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 STARD3NLO95772 234 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 SERPINB2P05120 415 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 TBC1D2BQ9UPU7 963 aa13.61□□□□□ -0.23
LSP1P1-201ENST00000599825 HEG1Q9ULI3 1381 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 BTBD11A6QL63 1104 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 A1BGP04217 495 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 TM4SF1P30408 202 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 DCTN1Q14203 1278 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 MCM10Q7L590 875 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 NPM2Q86SE8 214 aaKnown RBP13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 C2CD5Q86YS7 1000 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
LSP1P1-201ENST00000599825 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 TBC1D9BQ66K14 1250 aa13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
LSP1P1-201ENST00000599825 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
LSP1P1-201ENST00000599825 HSPA6P17066 643 aa13.58□□□□□ -0.24
LSP1P1-201ENST00000599825 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
LSP1P1-201ENST00000599825 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
LSP1P1-201ENST00000599825 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
LSP1P1-201ENST00000599825 A0A087WZG4 1122 aa13.56□□□□□ -0.24
LSP1P1-201ENST00000599825 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
LSP1P1-201ENST00000599825 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
LSP1P1-201ENST00000599825 H0YIN7 160 aa13.55□□□□□ -0.24
LSP1P1-201ENST00000599825 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
LSP1P1-201ENST00000599825 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
LSP1P1-201ENST00000599825 COL11A2P13942 1736 aaPredicted RBP13.54□□□□□ -0.24
LSP1P1-201ENST00000599825 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
LSP1P1-201ENST00000599825 RRAGCQ9HB90 399 aa13.54□□□□□ -0.24
LSP1P1-201ENST00000599825 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
LSP1P1-201ENST00000599825 CEMIPQ8WUJ3 1361 aa13.54□□□□□ -0.24
LSP1P1-201ENST00000599825 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 HTRA3P83110 453 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 PRR5LQ6MZQ0 368 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 TEX13AQ9BXU3 409 aaPredicted RBP13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 ANKRD31Q8N7Z5 1873 aa13.53□□□□□ -0.24
LSP1P1-201ENST00000599825 C21orf2O43822 256 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 TOMM70O94826 608 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 CAMTA2O94983 1202 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 NEFMP07197 916 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 SETDB2Q96T68 719 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 THUMPD2Q9BTF0 503 aaKnown RBP13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
LSP1P1-201ENST00000599825 BCORQ6W2J9 1755 aa13.51□□□□□ -0.25
LSP1P1-201ENST00000599825 PRELPP51888 382 aa13.51□□□□□ -0.25
LSP1P1-201ENST00000599825 ST5P78524 1137 aa13.51□□□□□ -0.25
LSP1P1-201ENST00000599825 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
LSP1P1-201ENST00000599825 SBF1O95248 1867 aa13.5□□□□□ -0.25
LSP1P1-201ENST00000599825 NFKBIEO00221 500 aa13.49□□□□□ -0.25
LSP1P1-201ENST00000599825 LMNB1P20700 586 aa13.49□□□□□ -0.25
LSP1P1-201ENST00000599825 PDE6BP35913 854 aa13.49□□□□□ -0.25
LSP1P1-201ENST00000599825 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
LSP1P1-201ENST00000599825 CEP350Q5VT06 3117 aa13.49□□□□□ -0.25
LSP1P1-201ENST00000599825 MAPK8IP3Q9UPT6 1336 aa13.48□□□□□ -0.25
LSP1P1-201ENST00000599825 TNRC6CQ9HCJ0 1690 aaKnown RBP13.48□□□□□ -0.25
LSP1P1-201ENST00000599825 APLP1P51693 650 aa13.48□□□□□ -0.25
LSP1P1-201ENST00000599825 BRIP1Q9BX63 1249 aa13.48□□□□□ -0.25
LSP1P1-201ENST00000599825 CCDC88AQ3V6T2 1871 aa13.47□□□□□ -0.25
LSP1P1-201ENST00000599825 NBPF26B4DH59 902 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms