RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
SYMPK-213ENST00000599460 KRT24Q2M2I5 525 aa17.56■□□□□ 0.4
SYMPK-213ENST00000599460 KRT32Q14532 448 aa17.56■□□□□ 0.4
SYMPK-213ENST00000599460 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
SYMPK-213ENST00000599460 DCAF5Q96JK2 942 aa17.56■□□□□ 0.4
SYMPK-213ENST00000599460 PLXNC1O60486 1568 aa17.56■□□□□ 0.4
SYMPK-213ENST00000599460 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
SYMPK-213ENST00000599460 CDC42BPAQ5VT25 1732 aa17.55■□□□□ 0.4
SYMPK-213ENST00000599460 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
SYMPK-213ENST00000599460 VAMP4O75379 141 aa17.55■□□□□ 0.4
SYMPK-213ENST00000599460 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
SYMPK-213ENST00000599460 RFC4P35249 363 aa17.55■□□□□ 0.4
SYMPK-213ENST00000599460 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
SYMPK-213ENST00000599460 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
SYMPK-213ENST00000599460 CASTP20810 708 aaKnown RBP17.54■□□□□ 0.4
SYMPK-213ENST00000599460 KSR2Q6VAB6 950 aa17.54■□□□□ 0.4
SYMPK-213ENST00000599460 PCDH11XQ9BZA7 1347 aa17.54■□□□□ 0.4
SYMPK-213ENST00000599460 PCDH11YQ9BZA8 1340 aa17.54■□□□□ 0.4
SYMPK-213ENST00000599460 KDM5AP29375 1690 aaKnown RBP17.54■□□□□ 0.4
SYMPK-213ENST00000599460 TSR1Q2NL82 804 aaKnown RBP17.54■□□□□ 0.4
SYMPK-213ENST00000599460 METP08581 1390 aa17.53■□□□□ 0.4
SYMPK-213ENST00000599460 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
SYMPK-213ENST00000599460 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
SYMPK-213ENST00000599460 SPATA31E1Q6ZUB1 1445 aa17.53■□□□□ 0.4
SYMPK-213ENST00000599460 CCDC43Q96MW1 224 aaKnown RBP17.53■□□□□ 0.4
SYMPK-213ENST00000599460 UBAC1Q9BSL1 405 aa17.53■□□□□ 0.4
SYMPK-213ENST00000599460 ADCY10Q96PN6 1610 aa17.53■□□□□ 0.4
SYMPK-213ENST00000599460 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
SYMPK-213ENST00000599460 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
SYMPK-213ENST00000599460 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.4
SYMPK-213ENST00000599460 CEBPZQ03701 1054 aaKnown RBP17.52■□□□□ 0.4
SYMPK-213ENST00000599460 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
SYMPK-213ENST00000599460 SMARCC1Q92922 1105 aaPredicted RBP17.52■□□□□ 0.4
SYMPK-213ENST00000599460 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
SYMPK-213ENST00000599460 TPM1P09493 284 aa17.52■□□□□ 0.39
SYMPK-213ENST00000599460 ZSCAN31Q96LW9 406 aaPredicted RBP17.52■□□□□ 0.39
SYMPK-213ENST00000599460 ZNF396Q96N95 335 aaPredicted RBP17.52■□□□□ 0.39
SYMPK-213ENST00000599460 FIBPO43427 364 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
SYMPK-213ENST00000599460 CDC5LQ99459 802 aaKnown RBP17.51■□□□□ 0.39
SYMPK-213ENST00000599460 TPM3P06753 285 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 MAP3K12Q12852 859 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 ANKRD20A12PQ8NF67 263 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 TNNQ9UQP3 1299 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
SYMPK-213ENST00000599460 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
SYMPK-213ENST00000599460 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
SYMPK-213ENST00000599460 TSHZ3Q63HK5 1081 aa17.5■□□□□ 0.39
SYMPK-213ENST00000599460 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
SYMPK-213ENST00000599460 GRM8O00222 908 aa17.5■□□□□ 0.39
SYMPK-213ENST00000599460 PCMTD1Q96MG8 357 aaPredicted RBP17.5■□□□□ 0.39
SYMPK-213ENST00000599460 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
SYMPK-213ENST00000599460 PRDM15P57071 1507 aaPredicted RBP17.5■□□□□ 0.39
SYMPK-213ENST00000599460 MYOM2P54296 1465 aa17.5■□□□□ 0.39
SYMPK-213ENST00000599460 TRAK2O60296 914 aa17.5■□□□□ 0.39
SYMPK-213ENST00000599460 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
SYMPK-213ENST00000599460 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
SYMPK-213ENST00000599460 STK38Q15208 465 aa17.49■□□□□ 0.39
SYMPK-213ENST00000599460 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
SYMPK-213ENST00000599460 DDX46Q7L014 1031 aaKnown RBP17.49■□□□□ 0.39
SYMPK-213ENST00000599460 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
SYMPK-213ENST00000599460 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
SYMPK-213ENST00000599460 KIF1BO60333 1816 aa17.49■□□□□ 0.39
SYMPK-213ENST00000599460 DZIP1Q86YF9 867 aaKnown RBP17.49■□□□□ 0.39
SYMPK-213ENST00000599460 RHPN1Q8TCX5 695 aa17.49■□□□□ 0.39
SYMPK-213ENST00000599460 NUCB1Q02818 461 aa17.48■□□□□ 0.39
SYMPK-213ENST00000599460 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
SYMPK-213ENST00000599460 GOLIM4O00461 696 aa17.48■□□□□ 0.39
SYMPK-213ENST00000599460 USP5P45974 858 aa17.48■□□□□ 0.39
SYMPK-213ENST00000599460 UPF3BQ9BZI7 483 aaKnown RBP17.48■□□□□ 0.39
SYMPK-213ENST00000599460 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
SYMPK-213ENST00000599460 ABCC3O15438 1527 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 ANKRD44Q8N8A2 993 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
SYMPK-213ENST00000599460 MINDY4BA8MYZ0 360 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 CDKL5O76039 1030 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 MBD3O95983 291 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 TTC22Q5TAA0 569 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 NAPBQ9H115 298 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
SYMPK-213ENST00000599460 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
SYMPK-213ENST00000599460 ARAP3Q8WWN8 1544 aa17.46■□□□□ 0.39
SYMPK-213ENST00000599460 SBNO2Q9Y2G9 1366 aa17.46■□□□□ 0.39
SYMPK-213ENST00000599460 RLBP1P12271 317 aa17.46■□□□□ 0.39
SYMPK-213ENST00000599460 KINO60870 393 aaKnown RBP17.46■□□□□ 0.39
SYMPK-213ENST00000599460 TBC1D9Q6ZT07 1266 aa17.46■□□□□ 0.39
SYMPK-213ENST00000599460 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
SYMPK-213ENST00000599460 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
SYMPK-213ENST00000599460 LMBR1LQ6UX01 489 aa17.46■□□□□ 0.38
SYMPK-213ENST00000599460 SETDB2Q96T68 719 aa17.46■□□□□ 0.38
SYMPK-213ENST00000599460 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
SYMPK-213ENST00000599460 LINS1Q8NG48 757 aa17.45■□□□□ 0.38
SYMPK-213ENST00000599460 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
SYMPK-213ENST00000599460 TRIM35Q9UPQ4 493 aa17.45■□□□□ 0.38
SYMPK-213ENST00000599460 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms