RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 BRCA1P38398 1863 aaKnown RBP23.43■■□□□ 1.34
HOMER3-210ENST00000599097 A0A087WZG4 1122 aa23.43■■□□□ 1.34
HOMER3-210ENST00000599097 SLC39A6Q13433 755 aa23.43■■□□□ 1.34
HOMER3-210ENST00000599097 NPM2Q86SE8 214 aaKnown RBP23.43■■□□□ 1.34
HOMER3-210ENST00000599097 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
HOMER3-210ENST00000599097 POLRMTO00411 1230 aaKnown RBP23.42■■□□□ 1.34
HOMER3-210ENST00000599097 USPL1Q5W0Q7 1092 aa23.42■■□□□ 1.34
HOMER3-210ENST00000599097 HSPA6P17066 643 aa23.41■■□□□ 1.34
HOMER3-210ENST00000599097 DDR1Q08345 913 aa23.41■■□□□ 1.34
HOMER3-210ENST00000599097 UBR2Q8IWV8 1755 aa23.41■■□□□ 1.34
HOMER3-210ENST00000599097 TM4SF1P30408 202 aa23.4■■□□□ 1.34
HOMER3-210ENST00000599097 ZBTB1Q9Y2K1 713 aa23.39■■□□□ 1.33
HOMER3-210ENST00000599097 KCNA3P22001 575 aa23.38■■□□□ 1.33
HOMER3-210ENST00000599097 ZNF790Q6PG37 636 aa23.37■■□□□ 1.33
HOMER3-210ENST00000599097 KIF3CO14782 793 aa23.36■■□□□ 1.33
HOMER3-210ENST00000599097 FMNL2Q96PY5 1086 aa23.36■■□□□ 1.33
HOMER3-210ENST00000599097 PDZRN3Q9UPQ7 1066 aa23.36■■□□□ 1.33
HOMER3-210ENST00000599097 HEG1Q9ULI3 1381 aa23.36■■□□□ 1.33
HOMER3-210ENST00000599097 KDM2BQ8NHM5 1336 aa23.35■■□□□ 1.33
HOMER3-210ENST00000599097 TOMM70O94826 608 aa23.35■■□□□ 1.33
HOMER3-210ENST00000599097 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
HOMER3-210ENST00000599097 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-210ENST00000599097 NFIXQ14938 502 aa23.35■■□□□ 1.33
HOMER3-210ENST00000599097 C9orf131Q5VYM1 1079 aa23.35■■□□□ 1.33
HOMER3-210ENST00000599097 ZC3H4Q9UPT8 1303 aaKnown RBP23.34■■□□□ 1.33
HOMER3-210ENST00000599097 C16orf71Q8IYS4 520 aaPredicted RBP23.34■■□□□ 1.33
HOMER3-210ENST00000599097 CEMIPQ8WUJ3 1361 aa23.33■■□□□ 1.33
HOMER3-210ENST00000599097 SERPINB2P05120 415 aa23.33■■□□□ 1.33
HOMER3-210ENST00000599097 RTF1Q92541 710 aaKnown RBP23.33■■□□□ 1.33
HOMER3-210ENST00000599097 NRXN2Q9P2S2 1712 aa23.33■■□□□ 1.32
HOMER3-210ENST00000599097 CHRNA5P30532 468 aa23.32■■□□□ 1.32
HOMER3-210ENST00000599097 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
HOMER3-210ENST00000599097 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-210ENST00000599097 EIF5P55010 431 aaKnown RBP23.32■■□□□ 1.32
HOMER3-210ENST00000599097 ZNF496Q96IT1 587 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-210ENST00000599097 NEFMP07197 916 aa23.31■■□□□ 1.32
HOMER3-210ENST00000599097 APLP1P51693 650 aa23.31■■□□□ 1.32
HOMER3-210ENST00000599097 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
HOMER3-210ENST00000599097 RNF181Q9P0P0 153 aa23.31■■□□□ 1.32
HOMER3-210ENST00000599097 SIPA1L3O60292 1781 aaPredicted RBP23.31■■□□□ 1.32
HOMER3-210ENST00000599097 CEP350Q5VT06 3117 aa23.31■■□□□ 1.32
HOMER3-210ENST00000599097 H0YIN7 160 aa23.3■■□□□ 1.32
HOMER3-210ENST00000599097 TTLL6Q8N841 843 aa23.3■■□□□ 1.32
HOMER3-210ENST00000599097 CARMIL3Q8ND23 1372 aa23.29■■□□□ 1.32
HOMER3-210ENST00000599097 AFDNP55196 1824 aaKnown RBP23.29■■□□□ 1.32
HOMER3-210ENST00000599097 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
HOMER3-210ENST00000599097 RSPH6AQ9H0K4 717 aa23.29■■□□□ 1.32
HOMER3-210ENST00000599097 SCN7AQ01118 1682 aa23.28■■□□□ 1.32
HOMER3-210ENST00000599097 DLEC1Q9Y238 1755 aa23.28■■□□□ 1.32
HOMER3-210ENST00000599097 NPHP1O15259 732 aa23.28■■□□□ 1.32
HOMER3-210ENST00000599097 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
HOMER3-210ENST00000599097 PDE6BP35913 854 aa23.28■■□□□ 1.32
HOMER3-210ENST00000599097 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
HOMER3-210ENST00000599097 ZNF330Q9Y3S2 320 aaPredicted RBP23.28■■□□□ 1.32
HOMER3-210ENST00000599097 RBM46Q8TBY0 533 aaKnown RBP23.27■■□□□ 1.32
HOMER3-210ENST00000599097 BCL2L12Q9HB09 334 aa23.27■■□□□ 1.32
HOMER3-210ENST00000599097 HTATSF1O43719 755 aaKnown RBP23.26■■□□□ 1.31
HOMER3-210ENST00000599097 C2CD5Q86YS7 1000 aa23.26■■□□□ 1.31
HOMER3-210ENST00000599097 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
HOMER3-210ENST00000599097 LMNB1P20700 586 aa23.25■■□□□ 1.31
HOMER3-210ENST00000599097 BICDL1Q6ZP65 573 aa23.25■■□□□ 1.31
HOMER3-210ENST00000599097 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
HOMER3-210ENST00000599097 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
HOMER3-210ENST00000599097 FSTL1Q12841 308 aa23.24■■□□□ 1.31
HOMER3-210ENST00000599097 SETDB2Q96T68 719 aa23.24■■□□□ 1.31
HOMER3-210ENST00000599097 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
HOMER3-210ENST00000599097 ZNF652Q9Y2D9 606 aa23.24■■□□□ 1.31
HOMER3-210ENST00000599097 ST5P78524 1137 aa23.23■■□□□ 1.31
HOMER3-210ENST00000599097 PHACTR3Q96KR7 559 aa23.23■■□□□ 1.31
HOMER3-210ENST00000599097 SNRPA1P09661 255 aaKnown RBP23.22■■□□□ 1.31
HOMER3-210ENST00000599097 CNBD1Q8NA66 436 aa23.22■■□□□ 1.31
HOMER3-210ENST00000599097 RGL2O15211 777 aa23.21■■□□□ 1.31
HOMER3-210ENST00000599097 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
HOMER3-210ENST00000599097 TBC1D2BQ9UPU7 963 aa23.21■■□□□ 1.31
HOMER3-210ENST00000599097 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
HOMER3-210ENST00000599097 CLEC4GQ6UXB4 293 aa23.2■■□□□ 1.3
HOMER3-210ENST00000599097 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
HOMER3-210ENST00000599097 SBF1O95248 1867 aa23.19■■□□□ 1.3
HOMER3-210ENST00000599097 PNNQ9H307 717 aaKnown RBP23.19■■□□□ 1.3
HOMER3-210ENST00000599097 PRR5LQ6MZQ0 368 aa23.18■■□□□ 1.3
HOMER3-210ENST00000599097 CNKSR1Q969H4 720 aa23.18■■□□□ 1.3
HOMER3-210ENST00000599097 ZNF622Q969S3 477 aaKnown RBP eCLIP23.18■■□□□ 1.3
HOMER3-210ENST00000599097 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
HOMER3-210ENST00000599097 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
HOMER3-210ENST00000599097 A1BGP04217 495 aa23.17■■□□□ 1.3
HOMER3-210ENST00000599097 RASSF7Q02833 373 aa23.17■■□□□ 1.3
HOMER3-210ENST00000599097 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
HOMER3-210ENST00000599097 DPY19L2Q6NUT2 758 aa23.16■■□□□ 1.3
HOMER3-210ENST00000599097 MCM10Q7L590 875 aa23.16■■□□□ 1.3
HOMER3-210ENST00000599097 SMC1BQ8NDV3 1235 aa23.16■■□□□ 1.3
HOMER3-210ENST00000599097 GLTPD2A6NH11 291 aa23.15■■□□□ 1.3
HOMER3-210ENST00000599097 TAF7Q15545 349 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-210ENST00000599097 STYK1Q6J9G0 422 aa23.15■■□□□ 1.3
HOMER3-210ENST00000599097 VEGFAP15692 232 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-210ENST00000599097 NBPF5PQ86XG9 351 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-210ENST00000599097 RRAGCQ9HB90 399 aa23.14■■□□□ 1.29
HOMER3-210ENST00000599097 LTBP3Q9NS15 1303 aa23.13■■□□□ 1.29
HOMER3-210ENST00000599097 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
HOMER3-210ENST00000599097 TIAM2Q8IVF5 1701 aa23.13■■□□□ 1.29
HOMER3-210ENST00000599097 ANKRD31Q8N7Z5 1873 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms