RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 CYP19A1P11511 503 aaPredicted RBP24.66■■□□□ 1.54
SNRPA-205ENST00000598923 FKBP8Q14318 412 aa24.65■■□□□ 1.54
SNRPA-205ENST00000598923 RTF1Q92541 710 aaKnown RBP24.65■■□□□ 1.54
SNRPA-205ENST00000598923 SOS1Q07889 1333 aaPredicted RBP24.64■■□□□ 1.54
SNRPA-205ENST00000598923 ARFGEF1Q9Y6D6 1849 aa24.64■■□□□ 1.54
SNRPA-205ENST00000598923 A0A0G2JLW4 131 aa24.64■■□□□ 1.54
SNRPA-205ENST00000598923 VSIG10Q8N0Z9 540 aa24.64■■□□□ 1.54
SNRPA-205ENST00000598923 PNNQ9H307 717 aaKnown RBP24.63■■□□□ 1.53
SNRPA-205ENST00000598923 DPEP1P16444 411 aa24.62■■□□□ 1.53
SNRPA-205ENST00000598923 DDR1Q08345 913 aa24.62■■□□□ 1.53
SNRPA-205ENST00000598923 MCM10Q7L590 875 aa24.62■■□□□ 1.53
SNRPA-205ENST00000598923 AFDNP55196 1824 aaKnown RBP24.62■■□□□ 1.53
SNRPA-205ENST00000598923 KCNA3P22001 575 aa24.61■■□□□ 1.53
SNRPA-205ENST00000598923 TM4SF1P30408 202 aa24.61■■□□□ 1.53
SNRPA-205ENST00000598923 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
SNRPA-205ENST00000598923 TTC5Q8N0Z6 440 aa24.61■■□□□ 1.53
SNRPA-205ENST00000598923 PLEKHF1Q96S99 279 aa24.61■■□□□ 1.53
SNRPA-205ENST00000598923 ZBTB1Q9Y2K1 713 aa24.6■■□□□ 1.53
SNRPA-205ENST00000598923 NRXN2Q9P2S2 1712 aa24.6■■□□□ 1.53
SNRPA-205ENST00000598923 MAPK8IP3Q9UPT6 1336 aa24.6■■□□□ 1.53
SNRPA-205ENST00000598923 COL15A1P39059 1388 aa24.59■■□□□ 1.53
SNRPA-205ENST00000598923 BCS1LQ9Y276 419 aa24.59■■□□□ 1.53
SNRPA-205ENST00000598923 CEMIPQ8WUJ3 1361 aa24.58■■□□□ 1.53
SNRPA-205ENST00000598923 POLRMTO00411 1230 aaKnown RBP24.58■■□□□ 1.53
SNRPA-205ENST00000598923 ZPR1O75312 459 aa24.58■■□□□ 1.53
SNRPA-205ENST00000598923 WDR43Q15061 677 aaKnown RBP eCLIP24.58■■□□□ 1.53
SNRPA-205ENST00000598923 USPL1Q5W0Q7 1092 aa24.58■■□□□ 1.53
SNRPA-205ENST00000598923 NARFQ9UHQ1 456 aa24.58■■□□□ 1.53
SNRPA-205ENST00000598923 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
SNRPA-205ENST00000598923 BTBD11A6QL63 1104 aa24.57■■□□□ 1.52
SNRPA-205ENST00000598923 HTATSF1O43719 755 aaKnown RBP24.56■■□□□ 1.52
SNRPA-205ENST00000598923 NFE2L2Q16236 605 aa24.56■■□□□ 1.52
SNRPA-205ENST00000598923 ZNF790Q6PG37 636 aa24.56■■□□□ 1.52
SNRPA-205ENST00000598923 GPBP1L1Q9HC44 474 aaPredicted RBP24.56■■□□□ 1.52
SNRPA-205ENST00000598923 ZNF496Q96IT1 587 aaPredicted RBP24.55■■□□□ 1.52
SNRPA-205ENST00000598923 HEG1Q9ULI3 1381 aa24.54■■□□□ 1.52
SNRPA-205ENST00000598923 CCDC146Q8IYE0 955 aa24.54■■□□□ 1.52
SNRPA-205ENST00000598923 BCL2L12Q9HB09 334 aa24.54■■□□□ 1.52
SNRPA-205ENST00000598923 KCNQ3O43525 872 aa24.53■■□□□ 1.52
SNRPA-205ENST00000598923 STARD3NLO95772 234 aa24.52■■□□□ 1.52
SNRPA-205ENST00000598923 EIF5P55010 431 aaKnown RBP24.52■■□□□ 1.52
SNRPA-205ENST00000598923 NFIXQ14938 502 aa24.52■■□□□ 1.52
SNRPA-205ENST00000598923 ZNF526Q8TF50 670 aaPredicted RBP24.52■■□□□ 1.52
SNRPA-205ENST00000598923 PIM2Q9P1W9 311 aa24.52■■□□□ 1.52
SNRPA-205ENST00000598923 DLEC1Q9Y238 1755 aa24.52■■□□□ 1.52
SNRPA-205ENST00000598923 SCN7AQ01118 1682 aa24.51■■□□□ 1.51
SNRPA-205ENST00000598923 CANXP27824 592 aaKnown RBP24.51■■□□□ 1.51
SNRPA-205ENST00000598923 ARHGAP27Q6ZUM4 889 aa24.51■■□□□ 1.51
SNRPA-205ENST00000598923 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
SNRPA-205ENST00000598923 ANP32CO43423 234 aa24.5■■□□□ 1.51
SNRPA-205ENST00000598923 RIPK4P57078 832 aa24.5■■□□□ 1.51
SNRPA-205ENST00000598923 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
SNRPA-205ENST00000598923 THUMPD2Q9BTF0 503 aaKnown RBP24.5■■□□□ 1.51
SNRPA-205ENST00000598923 TEX13AQ9BXU3 409 aaPredicted RBP24.5■■□□□ 1.51
SNRPA-205ENST00000598923 MIS18AQ9NYP9 233 aa24.5■■□□□ 1.51
SNRPA-205ENST00000598923 CHRNA5P30532 468 aa24.49■■□□□ 1.51
SNRPA-205ENST00000598923 FMNL2Q96PY5 1086 aa24.49■■□□□ 1.51
SNRPA-205ENST00000598923 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
SNRPA-205ENST00000598923 SBF1O95248 1867 aa24.49■■□□□ 1.51
SNRPA-205ENST00000598923 NEUROD2Q15784 382 aa24.48■■□□□ 1.51
SNRPA-205ENST00000598923 DALRD3Q5D0E6 543 aaKnown RBP24.47■■□□□ 1.51
SNRPA-205ENST00000598923 RUNDC1Q96C34 613 aa24.47■■□□□ 1.51
SNRPA-205ENST00000598923 DLG5Q8TDM6 1919 aa24.46■■□□□ 1.51
SNRPA-205ENST00000598923 A0A087WZG4 1122 aa24.46■■□□□ 1.51
SNRPA-205ENST00000598923 SERPINB2P05120 415 aa24.46■■□□□ 1.51
SNRPA-205ENST00000598923 TMPOP42166 694 aaKnown RBP24.46■■□□□ 1.51
SNRPA-205ENST00000598923 KIF3CO14782 793 aa24.45■■□□□ 1.5
SNRPA-205ENST00000598923 CCDC184Q52MB2 194 aa24.45■■□□□ 1.5
SNRPA-205ENST00000598923 ANKRD31Q8N7Z5 1873 aa24.45■■□□□ 1.5
SNRPA-205ENST00000598923 BCORQ6W2J9 1755 aa24.44■■□□□ 1.5
SNRPA-205ENST00000598923 IL6STP40189 918 aaPredicted RBP24.44■■□□□ 1.5
SNRPA-205ENST00000598923 A1BGP04217 495 aa24.42■■□□□ 1.5
SNRPA-205ENST00000598923 CEP350Q5VT06 3117 aa24.42■■□□□ 1.5
SNRPA-205ENST00000598923 PNISRQ8TF01 805 aaKnown RBP24.41■■□□□ 1.5
SNRPA-205ENST00000598923 ZNF330Q9Y3S2 320 aaPredicted RBP24.41■■□□□ 1.5
SNRPA-205ENST00000598923 USP16Q9Y5T5 823 aa24.41■■□□□ 1.5
SNRPA-205ENST00000598923 CARMIL3Q8ND23 1372 aa24.41■■□□□ 1.5
SNRPA-205ENST00000598923 PRAMEF22A3QJZ6 481 aa24.4■■□□□ 1.5
SNRPA-205ENST00000598923 SNRPA1P09661 255 aaKnown RBP24.4■■□□□ 1.5
SNRPA-205ENST00000598923 LMOD3Q0VAK6 560 aa24.4■■□□□ 1.5
SNRPA-205ENST00000598923 C9orf131Q5VYM1 1079 aa24.4■■□□□ 1.5
SNRPA-205ENST00000598923 TBC1D9BQ66K14 1250 aa24.4■■□□□ 1.5
SNRPA-205ENST00000598923 TBC1D2BQ9UPU7 963 aa24.4■■□□□ 1.5
SNRPA-205ENST00000598923 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
SNRPA-205ENST00000598923 CCDC88AQ3V6T2 1871 aa24.37■■□□□ 1.49
SNRPA-205ENST00000598923 CAMTA2O94983 1202 aa24.37■■□□□ 1.49
SNRPA-205ENST00000598923 MRS2Q9HD23 443 aa24.37■■□□□ 1.49
SNRPA-205ENST00000598923 COL11A2P13942 1736 aaPredicted RBP24.36■■□□□ 1.49
SNRPA-205ENST00000598923 PIP4K2AP48426 406 aaPredicted RBP24.36■■□□□ 1.49
SNRPA-205ENST00000598923 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
SNRPA-205ENST00000598923 TSPYL4Q9UJ04 414 aa24.36■■□□□ 1.49
SNRPA-205ENST00000598923 KDM3BQ7LBC6 1761 aa24.36■■□□□ 1.49
SNRPA-205ENST00000598923 LAMB4A4D0S4 1761 aa24.35■■□□□ 1.49
SNRPA-205ENST00000598923 HSPA6P17066 643 aa24.35■■□□□ 1.49
SNRPA-205ENST00000598923 C2CD5Q86YS7 1000 aa24.35■■□□□ 1.49
SNRPA-205ENST00000598923 LAS1LQ9Y4W2 734 aaKnown RBP24.35■■□□□ 1.49
SNRPA-205ENST00000598923 H0YIN7 160 aa24.34■■□□□ 1.49
SNRPA-205ENST00000598923 APAF1O14727 1248 aa24.34■■□□□ 1.49
SNRPA-205ENST00000598923 TTLL6Q8N841 843 aa24.34■■□□□ 1.49
SNRPA-205ENST00000598923 TRIM35Q9UPQ4 493 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms