RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 ZBTB1Q9Y2K1 713 aa21.19■□□□□ 0.98
SMG9-208ENST00000598886 BCORQ6W2J9 1755 aa21.18■□□□□ 0.98
SMG9-208ENST00000598886 BCL2L12Q9HB09 334 aa21.18■□□□□ 0.98
SMG9-208ENST00000598886 USPL1Q5W0Q7 1092 aa21.16■□□□□ 0.98
SMG9-208ENST00000598886 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
SMG9-208ENST00000598886 GPBP1L1Q9HC44 474 aaPredicted RBP21.15■□□□□ 0.98
SMG9-208ENST00000598886 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
SMG9-208ENST00000598886 BCS1LQ9Y276 419 aa21.15■□□□□ 0.98
SMG9-208ENST00000598886 COL11A2P13942 1736 aaPredicted RBP21.15■□□□□ 0.98
SMG9-208ENST00000598886 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
SMG9-208ENST00000598886 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
SMG9-208ENST00000598886 DLG5Q8TDM6 1919 aa21.14■□□□□ 0.97
SMG9-208ENST00000598886 HEG1Q9ULI3 1381 aa21.13■□□□□ 0.97
SMG9-208ENST00000598886 KIF3CO14782 793 aa21.13■□□□□ 0.97
SMG9-208ENST00000598886 GAS2L2Q8NHY3 880 aa21.13■□□□□ 0.97
SMG9-208ENST00000598886 ZNF496Q96IT1 587 aaPredicted RBP21.13■□□□□ 0.97
SMG9-208ENST00000598886 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
SMG9-208ENST00000598886 EIF5P55010 431 aaKnown RBP21.12■□□□□ 0.97
SMG9-208ENST00000598886 CNGB1Q14028 1251 aaPredicted RBP21.12■□□□□ 0.97
SMG9-208ENST00000598886 NFIXQ14938 502 aa21.12■□□□□ 0.97
SMG9-208ENST00000598886 ZNF526Q8TF50 670 aaPredicted RBP21.12■□□□□ 0.97
SMG9-208ENST00000598886 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
SMG9-208ENST00000598886 ZNF790Q6PG37 636 aa21.11■□□□□ 0.97
SMG9-208ENST00000598886 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
SMG9-208ENST00000598886 ZPR1O75312 459 aa21.1■□□□□ 0.97
SMG9-208ENST00000598886 FCHSD2O94868 740 aa21.1■□□□□ 0.97
SMG9-208ENST00000598886 CHRNA5P30532 468 aa21.1■□□□□ 0.97
SMG9-208ENST00000598886 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
SMG9-208ENST00000598886 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
SMG9-208ENST00000598886 LAMB4A4D0S4 1761 aa21.09■□□□□ 0.97
SMG9-208ENST00000598886 KDM3BQ7LBC6 1761 aa21.08■□□□□ 0.97
SMG9-208ENST00000598886 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
SMG9-208ENST00000598886 ARFGEF2Q9Y6D5 1785 aa21.08■□□□□ 0.96
SMG9-208ENST00000598886 CCDC88AQ3V6T2 1871 aa21.07■□□□□ 0.96
SMG9-208ENST00000598886 TIAM2Q8IVF5 1701 aa21.07■□□□□ 0.96
SMG9-208ENST00000598886 TEFQ10587 303 aa21.07■□□□□ 0.96
SMG9-208ENST00000598886 ARHGAP27Q6ZUM4 889 aa21.07■□□□□ 0.96
SMG9-208ENST00000598886 TTC5Q8N0Z6 440 aa21.07■□□□□ 0.96
SMG9-208ENST00000598886 KCNQ3O43525 872 aa21.06■□□□□ 0.96
SMG9-208ENST00000598886 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
SMG9-208ENST00000598886 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
SMG9-208ENST00000598886 STARD3NLO95772 234 aa21.05■□□□□ 0.96
SMG9-208ENST00000598886 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
SMG9-208ENST00000598886 FER1L6Q2WGJ9 1857 aa21.04■□□□□ 0.96
SMG9-208ENST00000598886 CACNA1SQ13698 1873 aa21.03■□□□□ 0.96
SMG9-208ENST00000598886 SERPINB2P05120 415 aa21.03■□□□□ 0.96
SMG9-208ENST00000598886 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
SMG9-208ENST00000598886 HSPA6P17066 643 aa21.02■□□□□ 0.96
SMG9-208ENST00000598886 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
SMG9-208ENST00000598886 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.96
SMG9-208ENST00000598886 TEX13AQ9BXU3 409 aaPredicted RBP21.02■□□□□ 0.96
SMG9-208ENST00000598886 DICER1Q9UPY3 1922 aaKnown RBP21.02■□□□□ 0.95
SMG9-208ENST00000598886 PRELPP51888 382 aa21.01■□□□□ 0.95
SMG9-208ENST00000598886 TBC1D9BQ66K14 1250 aa21.01■□□□□ 0.95
SMG9-208ENST00000598886 NMRK2Q9NPI5 230 aa21.01■□□□□ 0.95
SMG9-208ENST00000598886 A0A087WZG4 1122 aa21■□□□□ 0.95
SMG9-208ENST00000598886 BTBD11A6QL63 1104 aa21■□□□□ 0.95
SMG9-208ENST00000598886 A1BGP04217 495 aa21■□□□□ 0.95
SMG9-208ENST00000598886 WDR90Q96KV7 1748 aa20.99■□□□□ 0.95
SMG9-208ENST00000598886 PRAMEF22A3QJZ6 481 aa20.99■□□□□ 0.95
SMG9-208ENST00000598886 CAMTA2O94983 1202 aa20.99■□□□□ 0.95
SMG9-208ENST00000598886 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
SMG9-208ENST00000598886 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMG9-208ENST00000598886 MCM10Q7L590 875 aa20.99■□□□□ 0.95
SMG9-208ENST00000598886 NUDCQ9Y266 331 aa20.99■□□□□ 0.95
SMG9-208ENST00000598886 TBC1D2BQ9UPU7 963 aa20.98■□□□□ 0.95
SMG9-208ENST00000598886 USP16Q9Y5T5 823 aa20.98■□□□□ 0.95
SMG9-208ENST00000598886 SLX4Q8IY92 1834 aa20.97■□□□□ 0.95
SMG9-208ENST00000598886 PRR5LQ6MZQ0 368 aa20.97■□□□□ 0.95
SMG9-208ENST00000598886 RASSF7Q02833 373 aa20.96■□□□□ 0.95
SMG9-208ENST00000598886 DCTN1Q14203 1278 aa20.96■□□□□ 0.95
SMG9-208ENST00000598886 BICDL1Q6ZP65 573 aa20.96■□□□□ 0.95
SMG9-208ENST00000598886 RNF181Q9P0P0 153 aa20.96■□□□□ 0.95
SMG9-208ENST00000598886 HTATSF1O43719 755 aaKnown RBP20.95■□□□□ 0.94
SMG9-208ENST00000598886 TOMM70O94826 608 aa20.95■□□□□ 0.94
SMG9-208ENST00000598886 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
SMG9-208ENST00000598886 NFKBIEO00221 500 aa20.94■□□□□ 0.94
SMG9-208ENST00000598886 PLEKHF1Q96S99 279 aa20.94■□□□□ 0.94
SMG9-208ENST00000598886 NBPF26B4DH59 902 aa20.93■□□□□ 0.94
SMG9-208ENST00000598886 PIP4K2AP48426 406 aaPredicted RBP20.93■□□□□ 0.94
SMG9-208ENST00000598886 NBPF10Q6P3W6 841 aaKnown RBP20.93■□□□□ 0.94
SMG9-208ENST00000598886 NBPF15Q8N660 670 aa20.93■□□□□ 0.94
SMG9-208ENST00000598886 TTLL6Q8N841 843 aa20.93■□□□□ 0.94
SMG9-208ENST00000598886 BRIP1Q9BX63 1249 aa20.93■□□□□ 0.94
SMG9-208ENST00000598886 ZC3H4Q9UPT8 1303 aaKnown RBP20.93■□□□□ 0.94
SMG9-208ENST00000598886 NUP98P52948 1817 aa20.92■□□□□ 0.94
SMG9-208ENST00000598886 ZNF330Q9Y3S2 320 aaPredicted RBP20.92■□□□□ 0.94
SMG9-208ENST00000598886 SNRPA1P09661 255 aaKnown RBP20.91■□□□□ 0.94
SMG9-208ENST00000598886 DZIP3Q86Y13 1208 aaKnown RBP20.91■□□□□ 0.94
SMG9-208ENST00000598886 CCDC24Q8N4L8 307 aa20.91■□□□□ 0.94
SMG9-208ENST00000598886 H0YIN7 160 aa20.9■□□□□ 0.94
SMG9-208ENST00000598886 RTF1Q92541 710 aaKnown RBP20.9■□□□□ 0.94
SMG9-208ENST00000598886 RBM46Q8TBY0 533 aaKnown RBP20.89■□□□□ 0.93
SMG9-208ENST00000598886 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.93
SMG9-208ENST00000598886 KDM2BQ8NHM5 1336 aa20.88■□□□□ 0.93
SMG9-208ENST00000598886 RGL2O15211 777 aa20.88■□□□□ 0.93
SMG9-208ENST00000598886 LMNB1P20700 586 aa20.88■□□□□ 0.93
SMG9-208ENST00000598886 PDE6BP35913 854 aa20.88■□□□□ 0.93
SMG9-208ENST00000598886 TAF7Q15545 349 aaPredicted RBP20.87■□□□□ 0.93
SMG9-208ENST00000598886 CLEC4GQ6UXB4 293 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms