RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KDM2BQ8NHM5 1336 aa22.95■■□□□ 1.26
PNKP-210ENST00000597965 COL15A1P39059 1388 aa22.94■■□□□ 1.26
PNKP-210ENST00000597965 STARD3NLO95772 234 aa22.94■■□□□ 1.26
PNKP-210ENST00000597965 SLC39A6Q13433 755 aa22.94■■□□□ 1.26
PNKP-210ENST00000597965 IFFO2Q5TF58 517 aa22.94■■□□□ 1.26
PNKP-210ENST00000597965 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
PNKP-210ENST00000597965 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
PNKP-210ENST00000597965 NPC1L1Q9UHC9 1359 aa22.92■■□□□ 1.26
PNKP-210ENST00000597965 TEX13AQ9BXU3 409 aaPredicted RBP22.92■■□□□ 1.26
PNKP-210ENST00000597965 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
PNKP-210ENST00000597965 ZC3H4Q9UPT8 1303 aaKnown RBP22.91■■□□□ 1.26
PNKP-210ENST00000597965 A0A087WZG4 1122 aa22.91■■□□□ 1.26
PNKP-210ENST00000597965 CHRNA5P30532 468 aa22.91■■□□□ 1.26
PNKP-210ENST00000597965 GAS2L2Q8NHY3 880 aa22.91■■□□□ 1.26
PNKP-210ENST00000597965 RBM46Q8TBY0 533 aaKnown RBP22.91■■□□□ 1.26
PNKP-210ENST00000597965 TEFQ10587 303 aa22.9■■□□□ 1.26
PNKP-210ENST00000597965 NMRK2Q9NPI5 230 aa22.9■■□□□ 1.26
PNKP-210ENST00000597965 RNF181Q9P0P0 153 aa22.9■■□□□ 1.26
PNKP-210ENST00000597965 ZBTB1Q9Y2K1 713 aa22.9■■□□□ 1.26
PNKP-210ENST00000597965 NFIXQ14938 502 aa22.89■■□□□ 1.25
PNKP-210ENST00000597965 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
PNKP-210ENST00000597965 FSTL1Q12841 308 aa22.88■■□□□ 1.25
PNKP-210ENST00000597965 NPM2Q86SE8 214 aaKnown RBP22.88■■□□□ 1.25
PNKP-210ENST00000597965 UBR2Q8IWV8 1755 aa22.88■■□□□ 1.25
PNKP-210ENST00000597965 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
PNKP-210ENST00000597965 SERPINB2P05120 415 aa22.87■■□□□ 1.25
PNKP-210ENST00000597965 PDZRN3Q9UPQ7 1066 aa22.87■■□□□ 1.25
PNKP-210ENST00000597965 NRXN2Q9P2S2 1712 aa22.86■■□□□ 1.25
PNKP-210ENST00000597965 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
PNKP-210ENST00000597965 AFDNP55196 1824 aaKnown RBP22.86■■□□□ 1.25
PNKP-210ENST00000597965 H0YIN7 160 aa22.85■■□□□ 1.25
PNKP-210ENST00000597965 ZNF790Q6PG37 636 aa22.85■■□□□ 1.25
PNKP-210ENST00000597965 TTLL6Q8N841 843 aa22.85■■□□□ 1.25
PNKP-210ENST00000597965 SBF1O95248 1867 aa22.84■■□□□ 1.25
PNKP-210ENST00000597965 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
PNKP-210ENST00000597965 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
PNKP-210ENST00000597965 TNRC6CQ9HCJ0 1690 aaKnown RBP22.84■■□□□ 1.25
PNKP-210ENST00000597965 LMNB1P20700 586 aa22.83■■□□□ 1.25
PNKP-210ENST00000597965 HEG1Q9ULI3 1381 aa22.83■■□□□ 1.25
PNKP-210ENST00000597965 DLEC1Q9Y238 1755 aa22.82■■□□□ 1.24
PNKP-210ENST00000597965 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
PNKP-210ENST00000597965 BCL2L12Q9HB09 334 aa22.82■■□□□ 1.24
PNKP-210ENST00000597965 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
PNKP-210ENST00000597965 IL6STP40189 918 aaPredicted RBP22.81■■□□□ 1.24
PNKP-210ENST00000597965 C2CD5Q86YS7 1000 aa22.81■■□□□ 1.24
PNKP-210ENST00000597965 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
PNKP-210ENST00000597965 PDE6BP35913 854 aa22.8■■□□□ 1.24
PNKP-210ENST00000597965 IL17REQ8NFR9 667 aa22.8■■□□□ 1.24
PNKP-210ENST00000597965 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
PNKP-210ENST00000597965 RRAGCQ9HB90 399 aa22.79■■□□□ 1.24
PNKP-210ENST00000597965 CARMIL3Q8ND23 1372 aa22.78■■□□□ 1.24
PNKP-210ENST00000597965 BICDL1Q6ZP65 573 aa22.78■■□□□ 1.24
PNKP-210ENST00000597965 DNAJC5GQ8N7S2 189 aa22.78■■□□□ 1.24
PNKP-210ENST00000597965 SMC1BQ8NDV3 1235 aa22.78■■□□□ 1.24
PNKP-210ENST00000597965 BRIP1Q9BX63 1249 aa22.78■■□□□ 1.24
PNKP-210ENST00000597965 WDR90Q96KV7 1748 aa22.77■■□□□ 1.24
PNKP-210ENST00000597965 SIPA1L3O60292 1781 aaPredicted RBP22.77■■□□□ 1.24
PNKP-210ENST00000597965 NPHP1O15259 732 aa22.77■■□□□ 1.24
PNKP-210ENST00000597965 ZNF330Q9Y3S2 320 aaPredicted RBP22.77■■□□□ 1.24
PNKP-210ENST00000597965 CEMIPQ8WUJ3 1361 aa22.76■■□□□ 1.23
PNKP-210ENST00000597965 GLTPD2A6NH11 291 aa22.76■■□□□ 1.23
PNKP-210ENST00000597965 BTBD11A6QL63 1104 aa22.76■■□□□ 1.23
PNKP-210ENST00000597965 VEGFAP15692 232 aaPredicted RBP22.76■■□□□ 1.23
PNKP-210ENST00000597965 CNGB1Q14028 1251 aaPredicted RBP22.76■■□□□ 1.23
PNKP-210ENST00000597965 SETDB2Q96T68 719 aa22.76■■□□□ 1.23
PNKP-210ENST00000597965 RASSF7Q02833 373 aa22.75■■□□□ 1.23
PNKP-210ENST00000597965 TBC1D9BQ66K14 1250 aa22.75■■□□□ 1.23
PNKP-210ENST00000597965 RTF1Q92541 710 aaKnown RBP22.75■■□□□ 1.23
PNKP-210ENST00000597965 SCN7AQ01118 1682 aa22.74■■□□□ 1.23
PNKP-210ENST00000597965 PRKAR2BP31323 418 aa22.74■■□□□ 1.23
PNKP-210ENST00000597965 DPY19L2Q6NUT2 758 aa22.74■■□□□ 1.23
PNKP-210ENST00000597965 ZNF622Q969S3 477 aaKnown RBP eCLIP22.74■■□□□ 1.23
PNKP-210ENST00000597965 TBC1D2BQ9UPU7 963 aa22.74■■□□□ 1.23
PNKP-210ENST00000597965 ST5P78524 1137 aa22.73■■□□□ 1.23
PNKP-210ENST00000597965 SOGA3Q5TF21 947 aa22.72■■□□□ 1.23
PNKP-210ENST00000597965 CNBD1Q8NA66 436 aa22.72■■□□□ 1.23
PNKP-210ENST00000597965 KLRG1Q96E93 195 aa22.72■■□□□ 1.23
PNKP-210ENST00000597965 RSPH6AQ9H0K4 717 aa22.72■■□□□ 1.23
PNKP-210ENST00000597965 PRR5LQ6MZQ0 368 aa22.71■■□□□ 1.23
PNKP-210ENST00000597965 CNKSR1Q969H4 720 aa22.71■■□□□ 1.23
PNKP-210ENST00000597965 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
PNKP-210ENST00000597965 A1BGP04217 495 aa22.7■■□□□ 1.22
PNKP-210ENST00000597965 CLEC4GQ6UXB4 293 aa22.7■■□□□ 1.22
PNKP-210ENST00000597965 PHACTR3Q96KR7 559 aa22.7■■□□□ 1.22
PNKP-210ENST00000597965 CCDC88AQ3V6T2 1871 aa22.69■■□□□ 1.22
PNKP-210ENST00000597965 TIAM2Q8IVF5 1701 aa22.69■■□□□ 1.22
PNKP-210ENST00000597965 NFKBIEO00221 500 aa22.69■■□□□ 1.22
PNKP-210ENST00000597965 CAMTA2O94983 1202 aa22.69■■□□□ 1.22
PNKP-210ENST00000597965 SNRPA1P09661 255 aaKnown RBP22.69■■□□□ 1.22
PNKP-210ENST00000597965 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
PNKP-210ENST00000597965 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
PNKP-210ENST00000597965 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
PNKP-210ENST00000597965 RGL2O15211 777 aa22.68■■□□□ 1.22
PNKP-210ENST00000597965 HTATSF1O43719 755 aaKnown RBP22.68■■□□□ 1.22
PNKP-210ENST00000597965 STYK1Q6J9G0 422 aa22.68■■□□□ 1.22
PNKP-210ENST00000597965 ANKRD31Q8N7Z5 1873 aa22.67■■□□□ 1.22
PNKP-210ENST00000597965 LTBP3Q9NS15 1303 aa22.67■■□□□ 1.22
PNKP-210ENST00000597965 C21orf2O43822 256 aa22.67■■□□□ 1.22
PNKP-210ENST00000597965 ERFEQ4G0M1 354 aa22.67■■□□□ 1.22
PNKP-210ENST00000597965 JMYQ8N9B5 988 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms