RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 DDX21Q9NR30 783 aaKnown RBP eCLIP29.01■■■□□ 2.23
SPTBN4-210ENST00000596900 KCPQ6ZWJ8 1503 aa29■■■□□ 2.23
SPTBN4-210ENST00000596900 GLI3P10071 1580 aa29■■■□□ 2.23
SPTBN4-210ENST00000596900 F6X3S4 739 aa29■■■□□ 2.23
SPTBN4-210ENST00000596900 IGHDP01880 384 aa28.99■■■□□ 2.23
SPTBN4-210ENST00000596900 DOT1LQ8TEK3 1739 aa28.99■■■□□ 2.23
SPTBN4-210ENST00000596900 HDAC1Q13547 482 aaPredicted RBP28.97■■■□□ 2.23
SPTBN4-210ENST00000596900 BCL9O00512 1426 aa28.97■■■□□ 2.23
SPTBN4-210ENST00000596900 FAM98CQ17RN3 349 aaKnown RBP28.96■■■□□ 2.23
SPTBN4-210ENST00000596900 PIGBQ92521 554 aa28.95■■■□□ 2.23
SPTBN4-210ENST00000596900 KAT6BQ8WYB5 2073 aa28.95■■■□□ 2.23
SPTBN4-210ENST00000596900 ERBB4Q15303 1308 aa28.95■■■□□ 2.22
SPTBN4-210ENST00000596900 DDX58O95786 925 aaKnown RBP28.95■■■□□ 2.22
SPTBN4-210ENST00000596900 ANXA1P04083 346 aa28.94■■■□□ 2.22
SPTBN4-210ENST00000596900 USP16Q9Y5T5 823 aa28.94■■■□□ 2.22
SPTBN4-210ENST00000596900 AFF2P51816 1311 aa28.92■■■□□ 2.22
SPTBN4-210ENST00000596900 PTCD1O75127 700 aaKnown RBP28.92■■■□□ 2.22
SPTBN4-210ENST00000596900 PDIA6Q15084 440 aa28.92■■■□□ 2.22
SPTBN4-210ENST00000596900 PROSER3Q2NL68 480 aa28.92■■■□□ 2.22
SPTBN4-210ENST00000596900 DNAAF4Q8WXU2 420 aa28.92■■■□□ 2.22
SPTBN4-210ENST00000596900 SYTL4Q96C24 671 aaPredicted RBP28.92■■■□□ 2.22
SPTBN4-210ENST00000596900 VSIG10Q8N0Z9 540 aa28.91■■■□□ 2.22
SPTBN4-210ENST00000596900 MARCH10Q8NA82 808 aaPredicted RBP28.91■■■□□ 2.22
SPTBN4-210ENST00000596900 PI4KAP2A4QPH2 592 aa28.91■■■□□ 2.22
SPTBN4-210ENST00000596900 PI4KAP1Q8N8J0 262 aa28.91■■■□□ 2.22
SPTBN4-210ENST00000596900 TEX13AQ9BXU3 409 aaPredicted RBP28.9■■■□□ 2.22
SPTBN4-210ENST00000596900 ATP10DQ9P241 1426 aa28.89■■■□□ 2.22
SPTBN4-210ENST00000596900 KSR2Q6VAB6 950 aa28.89■■■□□ 2.22
SPTBN4-210ENST00000596900 ATG3Q9NT62 314 aa28.89■■■□□ 2.22
SPTBN4-210ENST00000596900 THSD7AQ9UPZ6 1657 aa28.89■■■□□ 2.22
SPTBN4-210ENST00000596900 A0A0G2JS52 829 aa28.89■■■□□ 2.21
SPTBN4-210ENST00000596900 GNAI3P08754 354 aa28.89■■■□□ 2.21
SPTBN4-210ENST00000596900 MYT1Q01538 1121 aa28.89■■■□□ 2.21
SPTBN4-210ENST00000596900 SRCIN1Q9C0H9 1055 aa28.89■■■□□ 2.21
SPTBN4-210ENST00000596900 ASAP1Q9ULH1 1129 aa28.89■■■□□ 2.21
SPTBN4-210ENST00000596900 ADCY9O60503 1353 aa28.89■■■□□ 2.21
SPTBN4-210ENST00000596900 MYL6BP14649 208 aa28.88■■■□□ 2.21
SPTBN4-210ENST00000596900 PRIM1P49642 420 aaKnown RBP28.88■■■□□ 2.21
SPTBN4-210ENST00000596900 MEIS3Q99687 375 aa28.88■■■□□ 2.21
SPTBN4-210ENST00000596900 C1orf115Q9H7X2 142 aa28.88■■■□□ 2.21
SPTBN4-210ENST00000596900 TRPC5Q9UL62 973 aaPredicted RBP28.87■■■□□ 2.21
SPTBN4-210ENST00000596900 GJD4Q96KN9 370 aaPredicted RBP28.87■■■□□ 2.21
SPTBN4-210ENST00000596900 RPAP2Q8IXW5 612 aaPredicted RBP28.85■■■□□ 2.21
SPTBN4-210ENST00000596900 MAP3K2Q9Y2U5 619 aa28.85■■■□□ 2.21
SPTBN4-210ENST00000596900 ATRNO75882 1429 aa28.85■■■□□ 2.21
SPTBN4-210ENST00000596900 AIMP1Q12904 312 aaKnown RBP28.85■■■□□ 2.21
SPTBN4-210ENST00000596900 BEND3Q5T5X7 828 aa28.83■■■□□ 2.21
SPTBN4-210ENST00000596900 RBM42Q9BTD8 480 aaKnown RBP28.83■■■□□ 2.21
SPTBN4-210ENST00000596900 GNAI2P04899 355 aa28.83■■■□□ 2.2
SPTBN4-210ENST00000596900 XAGE3Q8WTP9 111 aa28.83■■■□□ 2.2
SPTBN4-210ENST00000596900 COPS6Q7L5N1 327 aa28.82■■■□□ 2.2
SPTBN4-210ENST00000596900 LRP10Q7Z4F1 713 aa28.82■■■□□ 2.2
SPTBN4-210ENST00000596900 RIC3Q7Z5B4 369 aa28.82■■■□□ 2.2
SPTBN4-210ENST00000596900 SMC5Q8IY18 1101 aa28.82■■■□□ 2.2
SPTBN4-210ENST00000596900 ALDH1L1O75891 902 aa28.8■■■□□ 2.2
SPTBN4-210ENST00000596900 STARD3NLO95772 234 aa28.8■■■□□ 2.2
SPTBN4-210ENST00000596900 ANKRD44Q8N8A2 993 aa28.8■■■□□ 2.2
SPTBN4-210ENST00000596900 GCC1Q96CN9 775 aa28.8■■■□□ 2.2
SPTBN4-210ENST00000596900 ACSBG1Q96GR2 724 aa28.8■■■□□ 2.2
SPTBN4-210ENST00000596900 UBTFL1P0CB47 393 aaPredicted RBP28.79■■■□□ 2.2
SPTBN4-210ENST00000596900 NEXNQ0ZGT2 675 aa28.79■■■□□ 2.2
SPTBN4-210ENST00000596900 CEP85Q6P2H3 762 aa28.78■■■□□ 2.2
SPTBN4-210ENST00000596900 ANKRD13DQ6ZTN6 518 aa28.78■■■□□ 2.2
SPTBN4-210ENST00000596900 LINS1Q8NG48 757 aa28.78■■■□□ 2.2
SPTBN4-210ENST00000596900 USP44Q9H0E7 712 aa28.78■■■□□ 2.2
SPTBN4-210ENST00000596900 HMMRO75330 724 aa28.77■■■□□ 2.2
SPTBN4-210ENST00000596900 NBPF26B4DH59 902 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 PIP4K2AP48426 406 aaPredicted RBP28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 NBPF14Q5TI25 921 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 NBPF10Q6P3W6 841 aaKnown RBP28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 DNAJC10Q8IXB1 793 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 SIRT2Q8IXJ6 389 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 NBPF15Q8N660 670 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 PDZRN3Q9UPQ7 1066 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 HDAC5Q9UQL6 1122 aa28.76■■■□□ 2.2
SPTBN4-210ENST00000596900 ARFGEF2Q9Y6D5 1785 aa28.76■■■□□ 2.19
SPTBN4-210ENST00000596900 IBTKQ9P2D0 1353 aaPredicted RBP28.76■■■□□ 2.19
SPTBN4-210ENST00000596900 A1BGP04217 495 aa28.76■■■□□ 2.19
SPTBN4-210ENST00000596900 ONECUT3O60422 494 aaPredicted RBP28.75■■■□□ 2.19
SPTBN4-210ENST00000596900 SMARCC1Q92922 1105 aaPredicted RBP28.75■■■□□ 2.19
SPTBN4-210ENST00000596900 PLBD2Q8NHP8 589 aa28.74■■■□□ 2.19
SPTBN4-210ENST00000596900 RGS3P49796 1198 aa28.74■■■□□ 2.19
SPTBN4-210ENST00000596900 METTL22Q9BUU2 404 aaPredicted RBP28.74■■■□□ 2.19
SPTBN4-210ENST00000596900 TJP1Q07157 1748 aa28.73■■■□□ 2.19
SPTBN4-210ENST00000596900 QTRT2Q9H974 415 aaKnown RBP28.73■■■□□ 2.19
SPTBN4-210ENST00000596900 SKAP1Q86WV1 359 aa28.72■■■□□ 2.19
SPTBN4-210ENST00000596900 TSHZ2Q9NRE2 1034 aa28.72■■■□□ 2.19
SPTBN4-210ENST00000596900 C9orf78Q9NZ63 289 aaPredicted RBP28.72■■■□□ 2.19
SPTBN4-210ENST00000596900 CICQ96RK0 1608 aaPredicted RBP28.72■■■□□ 2.19
SPTBN4-210ENST00000596900 LRRFIP2Q9Y608 721 aaKnown RBP28.7■■■□□ 2.19
SPTBN4-210ENST00000596900 PALLDQ8WX93 1383 aa28.7■■■□□ 2.19
SPTBN4-210ENST00000596900 SLC4A9Q96Q91 983 aa28.7■■■□□ 2.18
SPTBN4-210ENST00000596900 NHSQ6T4R5 1651 aa28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 CYP19A1P11511 503 aaPredicted RBP28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 NUCB1Q02818 461 aa28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 CWF19L2Q2TBE0 894 aaKnown RBP28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 MYD88Q99836 296 aa28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 DCTPP1Q9H773 170 aa28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 NUP188Q5SRE5 1749 aa28.69■■■□□ 2.18
SPTBN4-210ENST00000596900 AFDNP55196 1824 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms