RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 NARFQ9UHQ1 456 aa24.64■■□□□ 1.54
IRF3-209ENST00000595034 ATP10DQ9P241 1426 aa24.63■■□□□ 1.53
IRF3-209ENST00000595034 FMNL2Q96PY5 1086 aa24.63■■□□□ 1.53
IRF3-209ENST00000595034 ZBTB1Q9Y2K1 713 aa24.63■■□□□ 1.53
IRF3-209ENST00000595034 DPEP1P16444 411 aa24.62■■□□□ 1.53
IRF3-209ENST00000595034 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
IRF3-209ENST00000595034 PIM2Q9P1W9 311 aa24.62■■□□□ 1.53
IRF3-209ENST00000595034 KIF13BQ9NQT8 1826 aa24.62■■□□□ 1.53
IRF3-209ENST00000595034 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
IRF3-209ENST00000595034 HEG1Q9ULI3 1381 aa24.61■■□□□ 1.53
IRF3-209ENST00000595034 ZNF496Q96IT1 587 aaPredicted RBP24.6■■□□□ 1.53
IRF3-209ENST00000595034 PHACTR3Q96KR7 559 aa24.6■■□□□ 1.53
IRF3-209ENST00000595034 VIRMAQ69YN4 1812 aaKnown RBP24.59■■□□□ 1.53
IRF3-209ENST00000595034 CEMIPQ8WUJ3 1361 aa24.59■■□□□ 1.53
IRF3-209ENST00000595034 SENP3-EIF4A1A0A087X0R7 540 aa24.59■■□□□ 1.53
IRF3-209ENST00000595034 POLRMTO00411 1230 aaKnown RBP24.59■■□□□ 1.53
IRF3-209ENST00000595034 TM4SF1P30408 202 aa24.59■■□□□ 1.53
IRF3-209ENST00000595034 DDR1Q08345 913 aa24.59■■□□□ 1.53
IRF3-209ENST00000595034 ARHGAP27Q6ZUM4 889 aa24.59■■□□□ 1.53
IRF3-209ENST00000595034 HTATSF1O43719 755 aaKnown RBP24.57■■□□□ 1.52
IRF3-209ENST00000595034 DALRD3Q5D0E6 543 aaKnown RBP24.57■■□□□ 1.52
IRF3-209ENST00000595034 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
IRF3-209ENST00000595034 ADCY9O60503 1353 aa24.56■■□□□ 1.52
IRF3-209ENST00000595034 ZNF526Q8TF50 670 aaPredicted RBP24.56■■□□□ 1.52
IRF3-209ENST00000595034 PNNQ9H307 717 aaKnown RBP24.56■■□□□ 1.52
IRF3-209ENST00000595034 ZNF330Q9Y3S2 320 aaPredicted RBP24.56■■□□□ 1.52
IRF3-209ENST00000595034 N4BP2Q86UW6 1770 aaPredicted RBP24.55■■□□□ 1.52
IRF3-209ENST00000595034 NFIXQ14938 502 aa24.55■■□□□ 1.52
IRF3-209ENST00000595034 IL6STP40189 918 aaPredicted RBP24.54■■□□□ 1.52
IRF3-209ENST00000595034 EIF5P55010 431 aaKnown RBP24.54■■□□□ 1.52
IRF3-209ENST00000595034 GOLGB1Q14789 3259 aaKnown RBP24.53■■□□□ 1.52
IRF3-209ENST00000595034 SERPINB2P05120 415 aa24.52■■□□□ 1.52
IRF3-209ENST00000595034 KIAA1551Q9HCM1 1747 aa24.52■■□□□ 1.52
IRF3-209ENST00000595034 KCNA3P22001 575 aa24.51■■□□□ 1.51
IRF3-209ENST00000595034 MCM10Q7L590 875 aa24.51■■□□□ 1.51
IRF3-209ENST00000595034 SNRPA1P09661 255 aaKnown RBP24.5■■□□□ 1.51
IRF3-209ENST00000595034 CHRNA5P30532 468 aa24.5■■□□□ 1.51
IRF3-209ENST00000595034 NPHP1O15259 732 aa24.49■■□□□ 1.51
IRF3-209ENST00000595034 BICDL1Q6ZP65 573 aa24.49■■□□□ 1.51
IRF3-209ENST00000595034 SIPA1L3O60292 1781 aaPredicted RBP24.49■■□□□ 1.51
IRF3-209ENST00000595034 BCL2L12Q9HB09 334 aa24.48■■□□□ 1.51
IRF3-209ENST00000595034 PDZRN3Q9UPQ7 1066 aa24.48■■□□□ 1.51
IRF3-209ENST00000595034 MAPK8IP3Q9UPT6 1336 aa24.48■■□□□ 1.51
IRF3-209ENST00000595034 H0YIN7 160 aa24.47■■□□□ 1.51
IRF3-209ENST00000595034 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
IRF3-209ENST00000595034 PNISRQ8TF01 805 aaKnown RBP24.47■■□□□ 1.51
IRF3-209ENST00000595034 TBC1D2BQ9UPU7 963 aa24.47■■□□□ 1.51
IRF3-209ENST00000595034 CARMIL3Q8ND23 1372 aa24.46■■□□□ 1.51
IRF3-209ENST00000595034 A1BGP04217 495 aa24.46■■□□□ 1.51
IRF3-209ENST00000595034 KCNQ3O43525 872 aa24.45■■□□□ 1.5
IRF3-209ENST00000595034 RALBP1Q15311 655 aa24.45■■□□□ 1.5
IRF3-209ENST00000595034 SETDB2Q96T68 719 aa24.45■■□□□ 1.5
IRF3-209ENST00000595034 ZNF652Q9Y2D9 606 aa24.45■■□□□ 1.5
IRF3-209ENST00000595034 PDE6BP35913 854 aa24.44■■□□□ 1.5
IRF3-209ENST00000595034 DCTN1Q14203 1278 aa24.44■■□□□ 1.5
IRF3-209ENST00000595034 C9orf131Q5VYM1 1079 aa24.44■■□□□ 1.5
IRF3-209ENST00000595034 DZIP3Q86Y13 1208 aaKnown RBP24.44■■□□□ 1.5
IRF3-209ENST00000595034 C2CD5Q86YS7 1000 aa24.44■■□□□ 1.5
IRF3-209ENST00000595034 TTLL6Q8N841 843 aa24.44■■□□□ 1.5
IRF3-209ENST00000595034 TBC1D9BQ66K14 1250 aa24.43■■□□□ 1.5
IRF3-209ENST00000595034 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
IRF3-209ENST00000595034 USP16Q9Y5T5 823 aa24.42■■□□□ 1.5
IRF3-209ENST00000595034 ARFGEF1Q9Y6D6 1849 aa24.42■■□□□ 1.5
IRF3-209ENST00000595034 ST5P78524 1137 aa24.41■■□□□ 1.5
IRF3-209ENST00000595034 BRIP1Q9BX63 1249 aa24.41■■□□□ 1.5
IRF3-209ENST00000595034 RNF181Q9P0P0 153 aa24.41■■□□□ 1.5
IRF3-209ENST00000595034 NRXN2Q9P2S2 1712 aa24.41■■□□□ 1.5
IRF3-209ENST00000595034 NFE2L2Q16236 605 aa24.4■■□□□ 1.5
IRF3-209ENST00000595034 CLEC4GQ6UXB4 293 aa24.4■■□□□ 1.5
IRF3-209ENST00000595034 CNBD1Q8NA66 436 aa24.4■■□□□ 1.5
IRF3-209ENST00000595034 SCN7AQ01118 1682 aa24.4■■□□□ 1.5
IRF3-209ENST00000595034 KDM2BQ8NHM5 1336 aa24.39■■□□□ 1.5
IRF3-209ENST00000595034 CAMTA2O94983 1202 aa24.39■■□□□ 1.49
IRF3-209ENST00000595034 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
IRF3-209ENST00000595034 AFDNP55196 1824 aaKnown RBP24.38■■□□□ 1.49
IRF3-209ENST00000595034 RGL2O15211 777 aa24.37■■□□□ 1.49
IRF3-209ENST00000595034 PRR5LQ6MZQ0 368 aa24.37■■□□□ 1.49
IRF3-209ENST00000595034 ZNF622Q969S3 477 aaKnown RBP eCLIP24.37■■□□□ 1.49
IRF3-209ENST00000595034 PLEKHF1Q96S99 279 aa24.37■■□□□ 1.49
IRF3-209ENST00000595034 KIF3CO14782 793 aa24.36■■□□□ 1.49
IRF3-209ENST00000595034 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
IRF3-209ENST00000595034 NBPF5PQ86XG9 351 aaPredicted RBP24.35■■□□□ 1.49
IRF3-209ENST00000595034 PRAMEF22A3QJZ6 481 aa24.34■■□□□ 1.49
IRF3-209ENST00000595034 TOMM70O94826 608 aa24.34■■□□□ 1.49
IRF3-209ENST00000595034 HSPA6P17066 643 aa24.34■■□□□ 1.49
IRF3-209ENST00000595034 LMNB1P20700 586 aa24.34■■□□□ 1.49
IRF3-209ENST00000595034 PIP4K2AP48426 406 aaPredicted RBP24.34■■□□□ 1.49
IRF3-209ENST00000595034 LMOD3Q0VAK6 560 aa24.34■■□□□ 1.49
IRF3-209ENST00000595034 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
IRF3-209ENST00000595034 CNKSR1Q969H4 720 aa24.33■■□□□ 1.49
IRF3-209ENST00000595034 MIS18AQ9NYP9 233 aa24.33■■□□□ 1.49
IRF3-209ENST00000595034 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
IRF3-209ENST00000595034 TPTE2Q6XPS3 522 aa24.31■■□□□ 1.48
IRF3-209ENST00000595034 DLEC1Q9Y238 1755 aa24.3■■□□□ 1.48
IRF3-209ENST00000595034 RASSF7Q02833 373 aa24.3■■□□□ 1.48
IRF3-209ENST00000595034 SOGA3Q5TF21 947 aa24.3■■□□□ 1.48
IRF3-209ENST00000595034 STYK1Q6J9G0 422 aa24.3■■□□□ 1.48
IRF3-209ENST00000595034 NIP7Q9Y221 180 aaKnown RBP eCLIP24.3■■□□□ 1.48
IRF3-209ENST00000595034 NBPF26B4DH59 902 aa24.29■■□□□ 1.48
IRF3-209ENST00000595034 GTF2E1P29083 439 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms