RNA–Protein interactions for RNA: ENST00000594597.5

GRAMD1A-204, Transcript of GRAM domain containing 1A, human

TSL 4

Gene GRAMD1A, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-204	ENST00000594597	ZPR1	O75312	459 aa		13.73	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	FCHSD2	O94868	740 aa		13.73	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	MMP10	P09238	476 aa		13.73	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	CNGB1	Q14028	1251 aa	Predicted RBP	13.73	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	RTF1	Q92541	710 aa	Known RBP	13.73	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	SLC4A9	Q96Q91	983 aa		13.72	□□□□□ -0.21
GRAMD1A-204	ENST00000594597		A0A087WZG4	1122 aa		13.71	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	HTATSF1	O43719	755 aa	Known RBP	13.71	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.71	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	PPP2R1A	P30153	589 aa		13.71	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	LGR6	Q9HBX8	967 aa		13.71	□□□□□ -0.21
GRAMD1A-204	ENST00000594597	SIPA1L3	O60292	1781 aa	Predicted RBP	13.71	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	USP42	Q9H9J4	1324 aa	Known RBP	13.7	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	GYS1	P13807	737 aa		13.7	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	PRKAR2B	P31323	418 aa		13.7	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	KCP	Q6ZWJ8	1503 aa		13.69	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	AMIGO3	Q86WK7	504 aa		13.69	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	FMNL2	Q96PY5	1086 aa		13.69	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	RSPH6A	Q9H0K4	717 aa		13.69	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	C10orf71	Q711Q0	1435 aa		13.68	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	CYP19A1	P11511	503 aa	Predicted RBP	13.68	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	ZNF790	Q6PG37	636 aa		13.68	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	DNAJC10	Q8IXB1	793 aa		13.68	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	COL15A1	P39059	1388 aa		13.68	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	CEMIP	Q8WUJ3	1361 aa		13.68	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	SOS1	Q07889	1333 aa	Predicted RBP	13.67	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	RALBP1	Q15311	655 aa		13.67	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	INTS5	Q6P9B9	1019 aa	Known RBP	13.67	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	NARF	Q9UHQ1	456 aa		13.67	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	HEG1	Q9ULI3	1381 aa		13.67	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	BTBD11	A6QL63	1104 aa		13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	MLLT1	Q03111	559 aa	Predicted RBP	13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	SLC39A6	Q13433	755 aa		13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	PNISR	Q8TF01	805 aa	Known RBP	13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	PDZRN3	Q9UPQ7	1066 aa		13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	ARFGEF1	Q9Y6D6	1849 aa		13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	PCNT	O95613	3336 aa		13.66	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	IL17RE	Q8NFR9	667 aa		13.65	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	RRAGC	Q9HB90	399 aa		13.65	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.65	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	BRCA1	P38398	1863 aa	Known RBP	13.65	□□□□□ -0.22
GRAMD1A-204	ENST00000594597	MAPK8IP3	Q9UPT6	1336 aa		13.64	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	PXDNL	A1KZ92	1463 aa		13.64	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	IL6ST	P40189	918 aa	Predicted RBP	13.64	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	SMIM5	Q71RC9	77 aa		13.64	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	PRDM10	Q9NQV6	1147 aa		13.64	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	PIM2	Q9P1W9	311 aa		13.64	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	SMC1B	Q8NDV3	1235 aa		13.63	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	ZNF496	Q96IT1	587 aa	Predicted RBP	13.63	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	ZBTB1	Q9Y2K1	713 aa		13.63	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	KIAA1551	Q9HCM1	1747 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	RGL2	O15211	777 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	FOXN1	O15353	648 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	SNRPA1	P09661	255 aa	Known RBP	13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	CANX	P27824	592 aa	Known RBP	13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	FKBP8	Q14318	412 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	USPL1	Q5W0Q7	1092 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	ARHGAP27	Q6ZUM4	889 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	PHACTR3	Q96KR7	559 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	BCS1L	Q9Y276	419 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	ZNF652	Q9Y2D9	606 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	DLG5	Q8TDM6	1919 aa		13.62	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	SCN7A	Q01118	1682 aa		13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	TM4SF1	P30408	202 aa		13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	EIF5	P55010	431 aa	Known RBP	13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	LMOD3	Q0VAK6	560 aa		13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	ABHD8	Q96I13	439 aa		13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	SRP68	Q9UHB9	627 aa	Known RBP	13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	AFDN	P55196	1824 aa	Known RBP	13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	NRXN2	Q9P2S2	1712 aa		13.61	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	POLRMT	O00411	1230 aa	Known RBP	13.6	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	RGS19	P49795	217 aa		13.6	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	TAF7	Q15545	349 aa	Predicted RBP	13.6	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	DALRD3	Q5D0E6	543 aa	Known RBP	13.6	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	LAMB4	A4D0S4	1761 aa		13.59	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	DLEC1	Q9Y238	1755 aa		13.59	□□□□□ -0.23
GRAMD1A-204	ENST00000594597		A0A0G2JLW4	131 aa		13.59	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	NPHP1	O15259	732 aa		13.59	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	DPEP1	P16444	411 aa		13.59	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	C9orf131	Q5VYM1	1079 aa		13.59	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	CARMIL3	Q8ND23	1372 aa		13.58	□□□□□ -0.23
GRAMD1A-204	ENST00000594597	SERPINB2	P05120	415 aa		13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	DDR1	Q08345	913 aa		13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	NFIX	Q14938	502 aa		13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	CLEC4G	Q6UXB4	293 aa		13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	KDM2B	Q8NHM5	1336 aa		13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.58	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	PDE6B	P35913	854 aa		13.57	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	NFE2L2	Q16236	605 aa		13.57	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	MCM10	Q7L590	875 aa		13.57	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	SETDB2	Q96T68	719 aa		13.57	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	BCOR	Q6W2J9	1755 aa		13.57	□□□□□ -0.24
GRAMD1A-204	ENST00000594597		H0YIN7	160 aa		13.56	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	ZEB1	P37275	1124 aa	Predicted RBP	13.56	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	ST5	P78524	1137 aa		13.56	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	DZIP3	Q86Y13	1208 aa	Known RBP	13.56	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	BABAM1	Q9NWV8	329 aa		13.56	□□□□□ -0.24
GRAMD1A-204	ENST00000594597	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms