RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 PRELPP51888 382 aa16.78■□□□□ 0.28
SIN3B-204ENST00000594372 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
SIN3B-204ENST00000594372 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
SIN3B-204ENST00000594372 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
SIN3B-204ENST00000594372 IL13P35225 146 aa16.77■□□□□ 0.28
SIN3B-204ENST00000594372 RBM46Q8TBY0 533 aaKnown RBP16.77■□□□□ 0.28
SIN3B-204ENST00000594372 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
SIN3B-204ENST00000594372 TM4SF1P30408 202 aa16.76■□□□□ 0.27
SIN3B-204ENST00000594372 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
SIN3B-204ENST00000594372 DICER1Q9UPY3 1922 aaKnown RBP16.76■□□□□ 0.27
SIN3B-204ENST00000594372 MRC1P22897 1456 aa16.75■□□□□ 0.27
SIN3B-204ENST00000594372 CAPN15O75808 1086 aa16.75■□□□□ 0.27
SIN3B-204ENST00000594372 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
SIN3B-204ENST00000594372 NFIXQ14938 502 aa16.75■□□□□ 0.27
SIN3B-204ENST00000594372 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
SIN3B-204ENST00000594372 ZPR1O75312 459 aa16.74■□□□□ 0.27
SIN3B-204ENST00000594372 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
SIN3B-204ENST00000594372 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
SIN3B-204ENST00000594372 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
SIN3B-204ENST00000594372 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
SIN3B-204ENST00000594372 KLRG1Q96E93 195 aa16.74■□□□□ 0.27
SIN3B-204ENST00000594372 SLC52A2Q9HAB3 445 aa16.74■□□□□ 0.27
SIN3B-204ENST00000594372 COL15A1P39059 1388 aa16.74■□□□□ 0.27
SIN3B-204ENST00000594372 SIPA1L3O60292 1781 aaPredicted RBP16.74■□□□□ 0.27
SIN3B-204ENST00000594372 KDM2BQ8NHM5 1336 aa16.73■□□□□ 0.27
SIN3B-204ENST00000594372 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
SIN3B-204ENST00000594372 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
SIN3B-204ENST00000594372 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
SIN3B-204ENST00000594372 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
SIN3B-204ENST00000594372 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
SIN3B-204ENST00000594372 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
SIN3B-204ENST00000594372 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
SIN3B-204ENST00000594372 SLX4Q8IY92 1834 aa16.71■□□□□ 0.27
SIN3B-204ENST00000594372 SERPINB2P05120 415 aa16.7■□□□□ 0.26
SIN3B-204ENST00000594372 MTHFSDQ2M296 383 aaKnown RBP16.7■□□□□ 0.26
SIN3B-204ENST00000594372 C2CD5Q86YS7 1000 aa16.7■□□□□ 0.26
SIN3B-204ENST00000594372 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
SIN3B-204ENST00000594372 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
SIN3B-204ENST00000594372 FSTL1Q12841 308 aa16.69■□□□□ 0.26
SIN3B-204ENST00000594372 NFKBIEO00221 500 aa16.68■□□□□ 0.26
SIN3B-204ENST00000594372 AMER1Q5JTC6 1135 aaPredicted RBP16.68■□□□□ 0.26
SIN3B-204ENST00000594372 TIMELESSQ9UNS1 1208 aa16.68■□□□□ 0.26
SIN3B-204ENST00000594372 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
SIN3B-204ENST00000594372 BCORQ6W2J9 1755 aa16.66■□□□□ 0.26
SIN3B-204ENST00000594372 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
SIN3B-204ENST00000594372 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SIN3B-204ENST00000594372 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
SIN3B-204ENST00000594372 SMC1BQ8NDV3 1235 aa16.66■□□□□ 0.26
SIN3B-204ENST00000594372 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
SIN3B-204ENST00000594372 LMNB1P20700 586 aa16.65■□□□□ 0.26
SIN3B-204ENST00000594372 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
SIN3B-204ENST00000594372 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.253e-11■■□□□ 12.8
SIN3B-204ENST00000594372 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
SIN3B-204ENST00000594372 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-204ENST00000594372 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
SIN3B-204ENST00000594372 POTECB2RU33 542 aa16.63■□□□□ 0.25
SIN3B-204ENST00000594372 C21orf2O43822 256 aa16.63■□□□□ 0.25
SIN3B-204ENST00000594372 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-204ENST00000594372 ZNF496Q96IT1 587 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-204ENST00000594372 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
SIN3B-204ENST00000594372 H0YIN7 160 aa16.62■□□□□ 0.25
SIN3B-204ENST00000594372 KCNQ3O43525 872 aa16.61■□□□□ 0.25
SIN3B-204ENST00000594372 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
SIN3B-204ENST00000594372 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
SIN3B-204ENST00000594372 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
SIN3B-204ENST00000594372 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
SIN3B-204ENST00000594372 EIF5P55010 431 aaKnown RBP16.61■□□□□ 0.25
SIN3B-204ENST00000594372 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
SIN3B-204ENST00000594372 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
SIN3B-204ENST00000594372 A1BGP04217 495 aa16.6■□□□□ 0.25
SIN3B-204ENST00000594372 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
SIN3B-204ENST00000594372 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
SIN3B-204ENST00000594372 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
SIN3B-204ENST00000594372 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
SIN3B-204ENST00000594372 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
SIN3B-204ENST00000594372 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
SIN3B-204ENST00000594372 HEG1Q9ULI3 1381 aa16.59■□□□□ 0.25
SIN3B-204ENST00000594372 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
SIN3B-204ENST00000594372 ZC3H4Q9UPT8 1303 aaKnown RBP16.58■□□□□ 0.24
SIN3B-204ENST00000594372 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
SIN3B-204ENST00000594372 STARD3NLO95772 234 aa16.57■□□□□ 0.24
SIN3B-204ENST00000594372 ERFEQ4G0M1 354 aa16.57■□□□□ 0.24
SIN3B-204ENST00000594372 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
SIN3B-204ENST00000594372 TEFQ10587 303 aa16.56■□□□□ 0.24
SIN3B-204ENST00000594372 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
SIN3B-204ENST00000594372 MKRN1Q9UHC7 482 aaKnown RBP16.56■□□□□ 0.24
SIN3B-204ENST00000594372 A0A087WZG4 1122 aa16.55■□□□□ 0.24
SIN3B-204ENST00000594372 PER1O15534 1290 aaPredicted RBP16.55■□□□□ 0.24
SIN3B-204ENST00000594372 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
SIN3B-204ENST00000594372 CAMTA2O94983 1202 aa16.55■□□□□ 0.24
SIN3B-204ENST00000594372 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
SIN3B-204ENST00000594372 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
SIN3B-204ENST00000594372 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
SIN3B-204ENST00000594372 NPHP1O15259 732 aa16.54■□□□□ 0.24
SIN3B-204ENST00000594372 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
SIN3B-204ENST00000594372 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
SIN3B-204ENST00000594372 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
SIN3B-204ENST00000594372 SCN4AP35499 1836 aa16.54■□□□□ 0.24
SIN3B-204ENST00000594372 PDE6BP35913 854 aa16.53■□□□□ 0.24
SIN3B-204ENST00000594372 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms