RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ASAP1Q9ULH1 1129 aa19.28■□□□□ 0.68
VRK3-207ENST00000594092 KAT6BQ8WYB5 2073 aa19.27■□□□□ 0.68
VRK3-207ENST00000594092 QTRT2Q9H974 415 aaKnown RBP19.27■□□□□ 0.68
VRK3-207ENST00000594092 USP16Q9Y5T5 823 aa19.27■□□□□ 0.68
VRK3-207ENST00000594092 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
VRK3-207ENST00000594092 ANXA1P04083 346 aa19.26■□□□□ 0.67
VRK3-207ENST00000594092 SYTL4Q96C24 671 aaPredicted RBP19.26■□□□□ 0.67
VRK3-207ENST00000594092 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
VRK3-207ENST00000594092 ONECUT3O60422 494 aaPredicted RBP19.25■□□□□ 0.67
VRK3-207ENST00000594092 FKBP5Q13451 457 aaPredicted RBP19.25■□□□□ 0.67
VRK3-207ENST00000594092 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
VRK3-207ENST00000594092 INTS3Q68E01 1043 aaKnown RBP19.25■□□□□ 0.67
VRK3-207ENST00000594092 PDIA6Q15084 440 aa19.25■□□□□ 0.67
VRK3-207ENST00000594092 ACSBG1Q96GR2 724 aa19.25■□□□□ 0.67
VRK3-207ENST00000594092 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
VRK3-207ENST00000594092 LAMB4A4D0S4 1761 aa19.25■□□□□ 0.67
VRK3-207ENST00000594092 F6X3S4 739 aa19.24■□□□□ 0.67
VRK3-207ENST00000594092 FBXO41Q8TF61 875 aa19.23■□□□□ 0.67
VRK3-207ENST00000594092 HYPKQ9NX55 129 aa19.23■□□□□ 0.67
VRK3-207ENST00000594092 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
VRK3-207ENST00000594092 ZBTB40Q9NUA8 1239 aa19.22■□□□□ 0.67
VRK3-207ENST00000594092 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
VRK3-207ENST00000594092 SLC4A10Q6U841 1118 aa19.21■□□□□ 0.67
VRK3-207ENST00000594092 SEPT12Q8IYM1 358 aa19.21■□□□□ 0.67
VRK3-207ENST00000594092 PCDHB15Q9Y5E8 787 aa19.21■□□□□ 0.67
VRK3-207ENST00000594092 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
VRK3-207ENST00000594092 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
VRK3-207ENST00000594092 KCNQ2O43526 872 aa19.19■□□□□ 0.66
VRK3-207ENST00000594092 CCT4P50991 539 aaKnown RBP19.19■□□□□ 0.66
VRK3-207ENST00000594092 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
VRK3-207ENST00000594092 PXDNLA1KZ92 1463 aa19.19■□□□□ 0.66
VRK3-207ENST00000594092 MYL6BP14649 208 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 KDM2BQ8NHM5 1336 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 PI4KAP2A4QPH2 592 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
VRK3-207ENST00000594092 ZNF772Q68DY9 489 aaPredicted RBP19.18■□□□□ 0.66
VRK3-207ENST00000594092 PI4KAP1Q8N8J0 262 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 SLC4A9Q96Q91 983 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 ADCY9O60503 1353 aa19.18■□□□□ 0.66
VRK3-207ENST00000594092 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
VRK3-207ENST00000594092 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
VRK3-207ENST00000594092 N4BP2Q86UW6 1770 aaPredicted RBP19.17■□□□□ 0.66
VRK3-207ENST00000594092 NBPF26B4DH59 902 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 A1BGP04217 495 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 NBPF14Q5TI25 921 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 NBPF10Q6P3W6 841 aaKnown RBP19.16■□□□□ 0.66
VRK3-207ENST00000594092 NBPF15Q8N660 670 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 DNAAF4Q8WXU2 420 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 IGHDP01880 384 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 AIMP1Q12904 312 aaKnown RBP19.16■□□□□ 0.66
VRK3-207ENST00000594092 FAM182BQ5T319 152 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 XAGE3Q8WTP9 111 aa19.16■□□□□ 0.66
VRK3-207ENST00000594092 KSR2Q6VAB6 950 aa19.15■□□□□ 0.66
VRK3-207ENST00000594092 CENPQQ7L2Z9 268 aaPredicted RBP19.15■□□□□ 0.66
VRK3-207ENST00000594092 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
VRK3-207ENST00000594092 DDX58O95786 925 aaKnown RBP19.14■□□□□ 0.65
VRK3-207ENST00000594092 MEIS3Q99687 375 aa19.14■□□□□ 0.65
VRK3-207ENST00000594092 MAP3K2Q9Y2U5 619 aa19.14■□□□□ 0.65
VRK3-207ENST00000594092 PALLDQ8WX93 1383 aa19.13■□□□□ 0.65
VRK3-207ENST00000594092 STARD3NLO95772 234 aa19.13■□□□□ 0.65
VRK3-207ENST00000594092 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
VRK3-207ENST00000594092 BEND3Q5T5X7 828 aa19.13■□□□□ 0.65
VRK3-207ENST00000594092 SMARCC1Q92922 1105 aaPredicted RBP19.13■□□□□ 0.65
VRK3-207ENST00000594092 C1orf115Q9H7X2 142 aa19.13■□□□□ 0.65
VRK3-207ENST00000594092 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
VRK3-207ENST00000594092 TJP1Q07157 1748 aa19.13■□□□□ 0.65
VRK3-207ENST00000594092 NHSQ6T4R5 1651 aa19.12■□□□□ 0.65
VRK3-207ENST00000594092 CYP19A1P11511 503 aaPredicted RBP19.11■□□□□ 0.65
VRK3-207ENST00000594092 PTF1AQ7RTS3 328 aa19.11■□□□□ 0.65
VRK3-207ENST00000594092 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
VRK3-207ENST00000594092 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
VRK3-207ENST00000594092 LOC102724428A0A0B4J2F2 783 aa19.11■□□□□ 0.65
VRK3-207ENST00000594092 SIK1P57059 783 aa19.11■□□□□ 0.65
VRK3-207ENST00000594092 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
VRK3-207ENST00000594092 ANKRD13DQ6ZTN6 518 aa19.1■□□□□ 0.65
VRK3-207ENST00000594092 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
VRK3-207ENST00000594092 BRWD3Q6RI45 1802 aa19.1■□□□□ 0.65
VRK3-207ENST00000594092 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
VRK3-207ENST00000594092 CICQ96RK0 1608 aaPredicted RBP19.09■□□□□ 0.65
VRK3-207ENST00000594092 ATP6V1AP38606 617 aa19.09■□□□□ 0.65
VRK3-207ENST00000594092 KRT27Q7Z3Y8 459 aa19.09■□□□□ 0.65
VRK3-207ENST00000594092 USP44Q9H0E7 712 aa19.09■□□□□ 0.65
VRK3-207ENST00000594092 BTAF1O14981 1849 aa19.08■□□□□ 0.65
VRK3-207ENST00000594092 GNAI3P08754 354 aa19.08■□□□□ 0.64
VRK3-207ENST00000594092 ALDH1L1O75891 902 aa19.07■□□□□ 0.64
VRK3-207ENST00000594092 TTLL7Q6ZT98 887 aa19.07■□□□□ 0.64
VRK3-207ENST00000594092 PLBD2Q8NHP8 589 aa19.07■□□□□ 0.64
VRK3-207ENST00000594092 ITPK1Q13572 414 aa19.07■□□□□ 0.64
VRK3-207ENST00000594092 SIRT2Q8IXJ6 389 aa19.07■□□□□ 0.64
VRK3-207ENST00000594092 LINS1Q8NG48 757 aa19.07■□□□□ 0.64
VRK3-207ENST00000594092 METTL22Q9BUU2 404 aaPredicted RBP19.07■□□□□ 0.64
VRK3-207ENST00000594092 ZBTB1Q9Y2K1 713 aa19.06■□□□□ 0.64
VRK3-207ENST00000594092 ARFGEF2Q9Y6D5 1785 aa19.05■□□□□ 0.64
VRK3-207ENST00000594092 ZNF831Q5JPB2 1677 aa19.05■□□□□ 0.64
VRK3-207ENST00000594092 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
VRK3-207ENST00000594092 CWF19L2Q2TBE0 894 aaKnown RBP19.05■□□□□ 0.64
VRK3-207ENST00000594092 RGS17Q9UGC6 210 aaPredicted RBP19.05■□□□□ 0.64
VRK3-207ENST00000594092 GNAI2P04899 355 aa19.04■□□□□ 0.64
VRK3-207ENST00000594092 RXRBP28702 533 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms