RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 MCM10Q7L590 875 aa17.11■□□□□ 0.33
COLGALT1-202ENST00000593832 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
COLGALT1-202ENST00000593832 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
COLGALT1-202ENST00000593832 C3P01024 1663 aa17.1■□□□□ 0.33
COLGALT1-202ENST00000593832 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
COLGALT1-202ENST00000593832 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
COLGALT1-202ENST00000593832 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
COLGALT1-202ENST00000593832 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 RPAP1Q9BWH6 1393 aaPredicted RBP17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 F6X3S4 739 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 MX1P20591 662 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 CCDC183Q5T5S1 534 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 G2E3Q7L622 706 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 TEX2Q8IWB9 1127 aa17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 SETD1AO15047 1707 aaKnown RBP17.09■□□□□ 0.33
COLGALT1-202ENST00000593832 SLC4A10Q6U841 1118 aa17.08■□□□□ 0.32
COLGALT1-202ENST00000593832 COG3Q96JB2 828 aa17.08■□□□□ 0.32
COLGALT1-202ENST00000593832 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.32
COLGALT1-202ENST00000593832 IL25Q9H293 177 aa17.08■□□□□ 0.32
COLGALT1-202ENST00000593832 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 CPS1P31327 1500 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 CNPY2Q9Y2B0 182 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 CCT4P50991 539 aaKnown RBP17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 KIF3AQ9Y496 699 aa17.07■□□□□ 0.32
COLGALT1-202ENST00000593832 KDM4AO75164 1064 aa17.06■□□□□ 0.32
COLGALT1-202ENST00000593832 GNAI2P04899 355 aa17.06■□□□□ 0.32
COLGALT1-202ENST00000593832 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
COLGALT1-202ENST00000593832 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
COLGALT1-202ENST00000593832 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
COLGALT1-202ENST00000593832 HSPA4P34932 840 aa17.05■□□□□ 0.32
COLGALT1-202ENST00000593832 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
COLGALT1-202ENST00000593832 CRB1P82279 1406 aa17.05■□□□□ 0.32
COLGALT1-202ENST00000593832 PNMA6EA0A0J9YXQ4 647 aa17.05■□□□□ 0.32
COLGALT1-202ENST00000593832 FUCA2Q9BTY2 467 aa17.05■□□□□ 0.32
COLGALT1-202ENST00000593832 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
COLGALT1-202ENST00000593832 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
COLGALT1-202ENST00000593832 UBE2HP62256 183 aa17.04■□□□□ 0.32
COLGALT1-202ENST00000593832 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
COLGALT1-202ENST00000593832 NRKQ7Z2Y5 1582 aa17.04■□□□□ 0.32
COLGALT1-202ENST00000593832 AP5Z1O43299 807 aa17.03■□□□□ 0.32
COLGALT1-202ENST00000593832 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
COLGALT1-202ENST00000593832 KIAA1524Q8TCG1 905 aa17.03■□□□□ 0.32
COLGALT1-202ENST00000593832 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
COLGALT1-202ENST00000593832 KCNF1Q9H3M0 494 aa17.03■□□□□ 0.32
COLGALT1-202ENST00000593832 ATP8B2P98198 1209 aa17.02■□□□□ 0.31
COLGALT1-202ENST00000593832 SYT1P21579 422 aa17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 U2AF2P26368 475 aaKnown RBP eCLIP17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 TTC14Q96N46 770 aa17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
COLGALT1-202ENST00000593832 MON2Q7Z3U7 1717 aa17■□□□□ 0.31
COLGALT1-202ENST00000593832 STX6O43752 255 aa17■□□□□ 0.31
COLGALT1-202ENST00000593832 GIMAP6Q6P9H5 292 aa17■□□□□ 0.31
COLGALT1-202ENST00000593832 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
COLGALT1-202ENST00000593832 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
COLGALT1-202ENST00000593832 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
COLGALT1-202ENST00000593832 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
COLGALT1-202ENST00000593832 THEMISQ8N1K5 641 aaPredicted RBP17■□□□□ 0.31
COLGALT1-202ENST00000593832 F13A1P00488 732 aa16.99■□□□□ 0.31
COLGALT1-202ENST00000593832 FIBPO43427 364 aa16.99■□□□□ 0.31
COLGALT1-202ENST00000593832 RUFY3Q7L099 469 aa16.99■□□□□ 0.31
COLGALT1-202ENST00000593832 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
COLGALT1-202ENST00000593832 AOX1Q06278 1338 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 RAD50Q92878 1312 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 KCNG1Q9UIX4 513 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 GNAI3P08754 354 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 AK2P54819 239 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 ANKRD7Q92527 254 aa16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 LARP6Q9BRS8 491 aaKnown RBP16.98■□□□□ 0.31
COLGALT1-202ENST00000593832 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 ERICH4A6NGS2 130 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 FOXO3O43524 673 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 PDCL2Q8N4E4 241 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 SGSM2O43147 1006 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 CTIFO43310 598 aaKnown RBP16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 LIMCH1Q9UPQ0 1083 aa16.97■□□□□ 0.31
COLGALT1-202ENST00000593832 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
COLGALT1-202ENST00000593832 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.3
COLGALT1-202ENST00000593832 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.96■□□□□ 0.3
COLGALT1-202ENST00000593832 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.3
COLGALT1-202ENST00000593832 FLIIQ13045 1269 aa16.95■□□□□ 0.3
COLGALT1-202ENST00000593832 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
COLGALT1-202ENST00000593832 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms