RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
CAPN12-202ENST00000593700 N4BP2Q86UW6 1770 aaPredicted RBP18.76■□□□□ 0.59
CAPN12-202ENST00000593700 IPO8O15397 1037 aaKnown RBP18.75■□□□□ 0.59
CAPN12-202ENST00000593700 TRIM37O94972 964 aa18.75■□□□□ 0.59
CAPN12-202ENST00000593700 TSPYL6Q8N831 410 aa18.75■□□□□ 0.59
CAPN12-202ENST00000593700 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
CAPN12-202ENST00000593700 TMOD3Q9NYL9 352 aa18.75■□□□□ 0.59
CAPN12-202ENST00000593700 NHSQ6T4R5 1651 aa18.75■□□□□ 0.59
CAPN12-202ENST00000593700 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
CAPN12-202ENST00000593700 BCAR3O75815 825 aa18.74■□□□□ 0.59
CAPN12-202ENST00000593700 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
CAPN12-202ENST00000593700 BRPF1P55201 1214 aaPredicted RBP18.74■□□□□ 0.59
CAPN12-202ENST00000593700 EIF4A1P60842 406 aaKnown RBP18.74■□□□□ 0.59
CAPN12-202ENST00000593700 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
CAPN12-202ENST00000593700 TNS1Q9HBL0 1735 aaKnown RBP18.74■□□□□ 0.59
CAPN12-202ENST00000593700 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
CAPN12-202ENST00000593700 ZKSCAN2Q63HK3 967 aa18.73■□□□□ 0.59
CAPN12-202ENST00000593700 ZNF790Q6PG37 636 aa18.73■□□□□ 0.59
CAPN12-202ENST00000593700 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
CAPN12-202ENST00000593700 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
CAPN12-202ENST00000593700 BCL2L13Q9BXK5 485 aa18.73■□□□□ 0.59
CAPN12-202ENST00000593700 ECM2O94769 699 aaPredicted RBP18.72■□□□□ 0.59
CAPN12-202ENST00000593700 RGPD3A6NKT7 1758 aaPredicted RBP18.72■□□□□ 0.59
CAPN12-202ENST00000593700 RGPD4Q7Z3J3 1758 aa18.72■□□□□ 0.59
CAPN12-202ENST00000593700 PLSCR1O15162 318 aa18.71■□□□□ 0.59
CAPN12-202ENST00000593700 APBA3O96018 575 aa18.71■□□□□ 0.59
CAPN12-202ENST00000593700 PDE3AQ14432 1141 aa18.71■□□□□ 0.59
CAPN12-202ENST00000593700 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
CAPN12-202ENST00000593700 KCPQ6ZWJ8 1503 aa18.7■□□□□ 0.58
CAPN12-202ENST00000593700 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
CAPN12-202ENST00000593700 KRT24Q2M2I5 525 aa18.7■□□□□ 0.58
CAPN12-202ENST00000593700 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
CAPN12-202ENST00000593700 FTSJ3Q8IY81 847 aaKnown RBP18.7■□□□□ 0.58
CAPN12-202ENST00000593700 CICQ96RK0 1608 aaPredicted RBP18.7■□□□□ 0.58
CAPN12-202ENST00000593700 PLIN1O60240 522 aa18.69■□□□□ 0.58
CAPN12-202ENST00000593700 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
CAPN12-202ENST00000593700 BTAF1O14981 1849 aa18.68■□□□□ 0.58
CAPN12-202ENST00000593700 MRPL50Q8N5N7 158 aaKnown RBP18.68■□□□□ 0.58
CAPN12-202ENST00000593700 ARHGAP45Q92619 1136 aa18.68■□□□□ 0.58
CAPN12-202ENST00000593700 PTPRCP08575 1304 aa18.68■□□□□ 0.58
CAPN12-202ENST00000593700 ZNF831Q5JPB2 1677 aa18.67■□□□□ 0.58
CAPN12-202ENST00000593700 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
CAPN12-202ENST00000593700 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
CAPN12-202ENST00000593700 API5Q9BZZ5 524 aaKnown RBP18.67■□□□□ 0.58
CAPN12-202ENST00000593700 KCNQ3O43525 872 aa18.66■□□□□ 0.58
CAPN12-202ENST00000593700 GIGYF1O75420 1035 aaPredicted RBP18.66■□□□□ 0.58
CAPN12-202ENST00000593700 SNRPA1P09661 255 aaKnown RBP18.66■□□□□ 0.58
CAPN12-202ENST00000593700 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
CAPN12-202ENST00000593700 SLC39A6Q13433 755 aa18.66■□□□□ 0.58
CAPN12-202ENST00000593700 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
CAPN12-202ENST00000593700 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
CAPN12-202ENST00000593700 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
CAPN12-202ENST00000593700 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
CAPN12-202ENST00000593700 TJP1Q07157 1748 aa18.65■□□□□ 0.58
CAPN12-202ENST00000593700 CAMKK2Q96RR4 588 aa18.64■□□□□ 0.57
CAPN12-202ENST00000593700 PXDNLA1KZ92 1463 aa18.64■□□□□ 0.57
CAPN12-202ENST00000593700 KCNQ2O43526 872 aa18.63■□□□□ 0.57
CAPN12-202ENST00000593700 EIF2S2P20042 333 aaKnown RBP18.63■□□□□ 0.57
CAPN12-202ENST00000593700 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
CAPN12-202ENST00000593700 ZNF496Q96IT1 587 aaPredicted RBP18.63■□□□□ 0.57
CAPN12-202ENST00000593700 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
CAPN12-202ENST00000593700 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
CAPN12-202ENST00000593700 ERBB4Q15303 1308 aa18.63■□□□□ 0.57
CAPN12-202ENST00000593700 TRIM27P14373 513 aa18.62■□□□□ 0.57
CAPN12-202ENST00000593700 EN1Q05925 392 aaPredicted RBP18.62■□□□□ 0.57
CAPN12-202ENST00000593700 AAMPQ13685 434 aa18.62■□□□□ 0.57
CAPN12-202ENST00000593700 PIGBQ92521 554 aa18.62■□□□□ 0.57
CAPN12-202ENST00000593700 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
CAPN12-202ENST00000593700 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
CAPN12-202ENST00000593700 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
CAPN12-202ENST00000593700 CRBNQ96SW2 442 aa18.61■□□□□ 0.57
CAPN12-202ENST00000593700 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
CAPN12-202ENST00000593700 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
CAPN12-202ENST00000593700 LY75O60449 1722 aa18.6■□□□□ 0.57
CAPN12-202ENST00000593700 COL5A3P25940 1745 aaPredicted RBP18.6■□□□□ 0.57
CAPN12-202ENST00000593700 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
CAPN12-202ENST00000593700 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
CAPN12-202ENST00000593700 RREB1Q92766 1687 aa18.6■□□□□ 0.57
CAPN12-202ENST00000593700 ABCC4O15439 1325 aa18.59■□□□□ 0.57
CAPN12-202ENST00000593700 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
CAPN12-202ENST00000593700 EZH2Q15910 746 aaKnown RBP18.59■□□□□ 0.57
CAPN12-202ENST00000593700 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
CAPN12-202ENST00000593700 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
CAPN12-202ENST00000593700 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
CAPN12-202ENST00000593700 CHPF2Q9P2E5 772 aa18.59■□□□□ 0.57
CAPN12-202ENST00000593700 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
CAPN12-202ENST00000593700 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
CAPN12-202ENST00000593700 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
CAPN12-202ENST00000593700 FLIIQ13045 1269 aa18.58■□□□□ 0.56
CAPN12-202ENST00000593700 FKBP5Q13451 457 aaPredicted RBP18.58■□□□□ 0.56
CAPN12-202ENST00000593700 NBPF14Q5TI25 921 aa18.58■□□□□ 0.56
CAPN12-202ENST00000593700 EXOC6Q8TAG9 804 aa18.58■□□□□ 0.56
CAPN12-202ENST00000593700 PANK1Q8TE04 598 aa18.58■□□□□ 0.56
CAPN12-202ENST00000593700 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
CAPN12-202ENST00000593700 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
CAPN12-202ENST00000593700 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
CAPN12-202ENST00000593700 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
CAPN12-202ENST00000593700 ATG3Q9NT62 314 aa18.57■□□□□ 0.56
CAPN12-202ENST00000593700 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
CAPN12-202ENST00000593700 DDX58O95786 925 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms