RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 ADCY9O60503 1353 aa16.09■□□□□ 0.17
CACNA1A-212ENST00000593160 EXOC5O00471 708 aa16.09■□□□□ 0.17
CACNA1A-212ENST00000593160 SNRPA1P09661 255 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-212ENST00000593160 PDIA6Q15084 440 aa16.09■□□□□ 0.17
CACNA1A-212ENST00000593160 THSD7AQ9UPZ6 1657 aa16.09■□□□□ 0.17
CACNA1A-212ENST00000593160 BCL9O00512 1426 aa16.09■□□□□ 0.17
CACNA1A-212ENST00000593160 VPS72Q15906 364 aa16.08■□□□□ 0.17
CACNA1A-212ENST00000593160 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.17
CACNA1A-212ENST00000593160 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.17
CACNA1A-212ENST00000593160 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.17
CACNA1A-212ENST00000593160 NGLY1Q96IV0 654 aa16.08■□□□□ 0.16
CACNA1A-212ENST00000593160 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.16
CACNA1A-212ENST00000593160 DDB1Q16531 1140 aa16.07■□□□□ 0.16
CACNA1A-212ENST00000593160 MEIS3Q99687 375 aa16.07■□□□□ 0.16
CACNA1A-212ENST00000593160 LRP10Q7Z4F1 713 aa16.06■□□□□ 0.16
CACNA1A-212ENST00000593160 PIGBQ92521 554 aa16.06■□□□□ 0.16
CACNA1A-212ENST00000593160 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
CACNA1A-212ENST00000593160 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
CACNA1A-212ENST00000593160 SIRT2Q8IXJ6 389 aa16.05■□□□□ 0.16
CACNA1A-212ENST00000593160 CCDC9Q9Y3X0 531 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-212ENST00000593160 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
CACNA1A-212ENST00000593160 SMC5Q8IY18 1101 aa16.05■□□□□ 0.16
CACNA1A-212ENST00000593160 TJP1Q07157 1748 aa16.04■□□□□ 0.16
CACNA1A-212ENST00000593160 NUP188Q5SRE5 1749 aa16.04■□□□□ 0.16
CACNA1A-212ENST00000593160 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
CACNA1A-212ENST00000593160 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
CACNA1A-212ENST00000593160 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
CACNA1A-212ENST00000593160 CICQ96RK0 1608 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-212ENST00000593160 ERBB4Q15303 1308 aa16.03■□□□□ 0.16
CACNA1A-212ENST00000593160 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-212ENST00000593160 BEND3Q5T5X7 828 aa16.02■□□□□ 0.16
CACNA1A-212ENST00000593160 KSR2Q6VAB6 950 aa16.02■□□□□ 0.16
CACNA1A-212ENST00000593160 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
CACNA1A-212ENST00000593160 USP21Q9UK80 565 aa16.02■□□□□ 0.16
CACNA1A-212ENST00000593160 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.16
CACNA1A-212ENST00000593160 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-212ENST00000593160 CEP85Q6P2H3 762 aa16.02■□□□□ 0.15
CACNA1A-212ENST00000593160 ANKRD44Q8N8A2 993 aa16.02■□□□□ 0.15
CACNA1A-212ENST00000593160 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.15
CACNA1A-212ENST00000593160 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-212ENST00000593160 SRCIN1Q9C0H9 1055 aa16.01■□□□□ 0.15
CACNA1A-212ENST00000593160 MAP3K2Q9Y2U5 619 aa16.01■□□□□ 0.15
CACNA1A-212ENST00000593160 ATRNO75882 1429 aa16.01■□□□□ 0.15
CACNA1A-212ENST00000593160 MYL6BP14649 208 aa16■□□□□ 0.15
CACNA1A-212ENST00000593160 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
CACNA1A-212ENST00000593160 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
CACNA1A-212ENST00000593160 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 DDX58O95786 925 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 GNAI3P08754 354 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 AFF2P51816 1311 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 GNAI2P04899 355 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 PIP4K2AP48426 406 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 RGS3P49796 1198 aa15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 MEX3CQ5U5Q3 659 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-212ENST00000593160 AIMP1Q12904 312 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-212ENST00000593160 COPS6Q7L5N1 327 aa15.98■□□□□ 0.15
CACNA1A-212ENST00000593160 GCC1Q96CN9 775 aa15.98■□□□□ 0.15
CACNA1A-212ENST00000593160 KAT6BQ8WYB5 2073 aa15.97■□□□□ 0.15
CACNA1A-212ENST00000593160 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
CACNA1A-212ENST00000593160 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
CACNA1A-212ENST00000593160 RREB1Q92766 1687 aa15.97■□□□□ 0.15
CACNA1A-212ENST00000593160 ZNF831Q5JPB2 1677 aa15.96■□□□□ 0.15
CACNA1A-212ENST00000593160 NUCB1Q02818 461 aa15.96■□□□□ 0.15
CACNA1A-212ENST00000593160 SYTL4Q96C24 671 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-212ENST00000593160 SLC4A9Q96Q91 983 aa15.96■□□□□ 0.15
CACNA1A-212ENST00000593160 A1BGP04217 495 aa15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 UBTFL1P0CB47 393 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 DNAJC10Q8IXB1 793 aa15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 LINS1Q8NG48 757 aa15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 PDE4AP27815 886 aa15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 ACSBG1Q96GR2 724 aa15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 TEX13AQ9BXU3 409 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 LRRFIP2Q9Y608 721 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-212ENST00000593160 COL5A3P25940 1745 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 NBPF7P0C2Y1 421 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 CWF19L2Q2TBE0 894 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 RIC3Q7Z5B4 369 aa15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 GJD4Q96KN9 370 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 METTL22Q9BUU2 404 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-212ENST00000593160 ANKRD13DQ6ZTN6 518 aa15.93■□□□□ 0.14
CACNA1A-212ENST00000593160 UTYO14607 1347 aa15.93■□□□□ 0.14
CACNA1A-212ENST00000593160 BTAF1O14981 1849 aa15.93■□□□□ 0.14
CACNA1A-212ENST00000593160 SBF2Q86WG5 1849 aa15.93■□□□□ 0.14
CACNA1A-212ENST00000593160 CHD1LQ86WJ1 897 aa15.92■□□□□ 0.14
CACNA1A-212ENST00000593160 PLBD2Q8NHP8 589 aa15.92■□□□□ 0.14
CACNA1A-212ENST00000593160 RBM19Q9Y4C8 960 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-212ENST00000593160 HMMRO75330 724 aa15.92■□□□□ 0.14
CACNA1A-212ENST00000593160 ATP8B2P98198 1209 aa15.92■□□□□ 0.14
CACNA1A-212ENST00000593160 TRPC5Q9UL62 973 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms