RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 DDR1Q08345 913 aa31.1■■■□□ 2.57
MBD3-211ENST00000592965 ZNF496Q96IT1 587 aaPredicted RBP31.1■■■□□ 2.57
MBD3-211ENST00000592965 STARD3NLO95772 234 aa31.08■■■□□ 2.57
MBD3-211ENST00000592965 NARFQ9UHQ1 456 aa31.08■■■□□ 2.57
MBD3-211ENST00000592965 ADCY9O60503 1353 aa31.07■■■□□ 2.56
MBD3-211ENST00000592965 USPL1Q5W0Q7 1092 aa31.07■■■□□ 2.56
MBD3-211ENST00000592965 A0A0G2JLW4 131 aa31.06■■■□□ 2.56
MBD3-211ENST00000592965 TM4SF1P30408 202 aa31.06■■■□□ 2.56
MBD3-211ENST00000592965 TEX13AQ9BXU3 409 aaPredicted RBP31.06■■■□□ 2.56
MBD3-211ENST00000592965 ATP10DQ9P241 1426 aa31.05■■■□□ 2.56
MBD3-211ENST00000592965 AFDNP55196 1824 aaKnown RBP31.05■■■□□ 2.56
MBD3-211ENST00000592965 POLRMTO00411 1230 aaKnown RBP31.04■■■□□ 2.56
MBD3-211ENST00000592965 DPEP1P16444 411 aa31.04■■■□□ 2.56
MBD3-211ENST00000592965 FMNL2Q96PY5 1086 aa31.04■■■□□ 2.56
MBD3-211ENST00000592965 ARFGEF1Q9Y6D6 1849 aa31.03■■■□□ 2.56
MBD3-211ENST00000592965 NRXN2Q9P2S2 1712 aa31.03■■■□□ 2.56
MBD3-211ENST00000592965 BTBD11A6QL63 1104 aa31.02■■■□□ 2.56
MBD3-211ENST00000592965 CANXP27824 592 aaKnown RBP31.02■■■□□ 2.56
MBD3-211ENST00000592965 EIF5P55010 431 aaKnown RBP31.02■■■□□ 2.56
MBD3-211ENST00000592965 SCN7AQ01118 1682 aa31.01■■■□□ 2.55
MBD3-211ENST00000592965 RTF1Q92541 710 aaKnown RBP31.01■■■□□ 2.55
MBD3-211ENST00000592965 HTATSF1O43719 755 aaKnown RBP31■■■□□ 2.55
MBD3-211ENST00000592965 BCL2L12Q9HB09 334 aa31■■■□□ 2.55
MBD3-211ENST00000592965 BCS1LQ9Y276 419 aa31■■■□□ 2.55
MBD3-211ENST00000592965 DLG5Q8TDM6 1919 aa31■■■□□ 2.55
MBD3-211ENST00000592965 KCNA3P22001 575 aa30.99■■■□□ 2.55
MBD3-211ENST00000592965 NFIXQ14938 502 aa30.99■■■□□ 2.55
MBD3-211ENST00000592965 A0A087WZG4 1122 aa30.98■■■□□ 2.55
MBD3-211ENST00000592965 KCNQ3O43525 872 aa30.98■■■□□ 2.55
MBD3-211ENST00000592965 GIGYF1O75420 1035 aaPredicted RBP30.98■■■□□ 2.55
MBD3-211ENST00000592965 MCM10Q7L590 875 aa30.98■■■□□ 2.55
MBD3-211ENST00000592965 C1QTNF8P60827 252 aa30.97■■■□□ 2.55
MBD3-211ENST00000592965 IL6STP40189 918 aaPredicted RBP30.95■■■□□ 2.55
MBD3-211ENST00000592965 PIM2Q9P1W9 311 aa30.94■■■□□ 2.54
MBD3-211ENST00000592965 DLEC1Q9Y238 1755 aa30.92■■■□□ 2.54
MBD3-211ENST00000592965 NEFMP07197 916 aa30.92■■■□□ 2.54
MBD3-211ENST00000592965 DCTN1Q14203 1278 aa30.92■■■□□ 2.54
MBD3-211ENST00000592965 BCORQ6W2J9 1755 aa30.92■■■□□ 2.54
MBD3-211ENST00000592965 A1BGP04217 495 aa30.9■■■□□ 2.54
MBD3-211ENST00000592965 SERPINB2P05120 415 aa30.9■■■□□ 2.54
MBD3-211ENST00000592965 RALBP1Q15311 655 aa30.9■■■□□ 2.54
MBD3-211ENST00000592965 DALRD3Q5D0E6 543 aaKnown RBP30.9■■■□□ 2.54
MBD3-211ENST00000592965 PLEKHF1Q96S99 279 aa30.9■■■□□ 2.54
MBD3-211ENST00000592965 CHRNA5P30532 468 aa30.89■■■□□ 2.54
MBD3-211ENST00000592965 GPBP1L1Q9HC44 474 aaPredicted RBP30.89■■■□□ 2.54
MBD3-211ENST00000592965 KDM3BQ7LBC6 1761 aa30.88■■■□□ 2.53
MBD3-211ENST00000592965 SNRPA1P09661 255 aaKnown RBP30.88■■■□□ 2.53
MBD3-211ENST00000592965 ARHGAP27Q6ZUM4 889 aa30.88■■■□□ 2.53
MBD3-211ENST00000592965 ZNF330Q9Y3S2 320 aaPredicted RBP30.88■■■□□ 2.53
MBD3-211ENST00000592965 TAF7Q15545 349 aaPredicted RBP30.87■■■□□ 2.53
MBD3-211ENST00000592965 TBC1D2BQ9UPU7 963 aa30.87■■■□□ 2.53
MBD3-211ENST00000592965 USP16Q9Y5T5 823 aa30.87■■■□□ 2.53
MBD3-211ENST00000592965 LAMB4A4D0S4 1761 aa30.87■■■□□ 2.53
MBD3-211ENST00000592965 NPM2Q86SE8 214 aaKnown RBP30.86■■■□□ 2.53
MBD3-211ENST00000592965 PNNQ9H307 717 aaKnown RBP30.86■■■□□ 2.53
MBD3-211ENST00000592965 NFE2L2Q16236 605 aa30.85■■■□□ 2.53
MBD3-211ENST00000592965 TBC1D9BQ66K14 1250 aa30.85■■■□□ 2.53
MBD3-211ENST00000592965 ANKRD31Q8N7Z5 1873 aa30.84■■■□□ 2.53
MBD3-211ENST00000592965 PRAMEF22A3QJZ6 481 aa30.84■■■□□ 2.53
MBD3-211ENST00000592965 BICDL1Q6ZP65 573 aa30.84■■■□□ 2.53
MBD3-211ENST00000592965 CARMIL3Q8ND23 1372 aa30.83■■■□□ 2.53
MBD3-211ENST00000592965 CAMTA2O94983 1202 aa30.83■■■□□ 2.53
MBD3-211ENST00000592965 ZNF526Q8TF50 670 aaPredicted RBP30.83■■■□□ 2.53
MBD3-211ENST00000592965 MAPK8IP3Q9UPT6 1336 aa30.82■■■□□ 2.52
MBD3-211ENST00000592965 DDX10Q13206 875 aaKnown RBP30.82■■■□□ 2.52
MBD3-211ENST00000592965 DZIP3Q86Y13 1208 aaKnown RBP30.8■■■□□ 2.52
MBD3-211ENST00000592965 PNISRQ8TF01 805 aaKnown RBP30.8■■■□□ 2.52
MBD3-211ENST00000592965 SBF1O95248 1867 aa30.8■■■□□ 2.52
MBD3-211ENST00000592965 SENP3-EIF4A1A0A087X0R7 540 aa30.79■■■□□ 2.52
MBD3-211ENST00000592965 PIP4K2AP48426 406 aaPredicted RBP30.78■■■□□ 2.52
MBD3-211ENST00000592965 MIS18AQ9NYP9 233 aa30.78■■■□□ 2.52
MBD3-211ENST00000592965 COL11A2P13942 1736 aaPredicted RBP30.77■■■□□ 2.52
MBD3-211ENST00000592965 C2CD5Q86YS7 1000 aa30.77■■■□□ 2.52
MBD3-211ENST00000592965 MYBBP1AQ9BQG0 1328 aaKnown RBP30.76■■■□□ 2.52
MBD3-211ENST00000592965 NBPF26B4DH59 902 aa30.76■■■□□ 2.51
MBD3-211ENST00000592965 PRR5LQ6MZQ0 368 aa30.76■■■□□ 2.51
MBD3-211ENST00000592965 NBPF10Q6P3W6 841 aaKnown RBP30.76■■■□□ 2.51
MBD3-211ENST00000592965 NBPF15Q8N660 670 aa30.76■■■□□ 2.51
MBD3-211ENST00000592965 SETDB2Q96T68 719 aa30.76■■■□□ 2.51
MBD3-211ENST00000592965 H0YIN7 160 aa30.75■■■□□ 2.51
MBD3-211ENST00000592965 RGL2O15211 777 aa30.75■■■□□ 2.51
MBD3-211ENST00000592965 C9orf131Q5VYM1 1079 aa30.75■■■□□ 2.51
MBD3-211ENST00000592965 THUMPD2Q9BTF0 503 aaKnown RBP30.75■■■□□ 2.51
MBD3-211ENST00000592965 BRIP1Q9BX63 1249 aa30.75■■■□□ 2.51
MBD3-211ENST00000592965 PDZRN3Q9UPQ7 1066 aa30.75■■■□□ 2.51
MBD3-211ENST00000592965 CLEC4GQ6UXB4 293 aa30.74■■■□□ 2.51
MBD3-211ENST00000592965 TTLL6Q8N841 843 aa30.74■■■□□ 2.51
MBD3-211ENST00000592965 CEP350Q5VT06 3117 aa30.74■■■□□ 2.51
MBD3-211ENST00000592965 ZNF652Q9Y2D9 606 aa30.73■■■□□ 2.51
MBD3-211ENST00000592965 PDE6BP35913 854 aa30.72■■■□□ 2.51
MBD3-211ENST00000592965 CNBD1Q8NA66 436 aa30.72■■■□□ 2.51
MBD3-211ENST00000592965 EIF4A1P60842 406 aaKnown RBP30.71■■■□□ 2.51
MBD3-211ENST00000592965 KIF3CO14782 793 aa30.7■■■□□ 2.51
MBD3-211ENST00000592965 RNF181Q9P0P0 153 aa30.68■■■□□ 2.5
MBD3-211ENST00000592965 ST5P78524 1137 aa30.67■■■□□ 2.5
MBD3-211ENST00000592965 CCDC24Q8N4L8 307 aa30.67■■■□□ 2.5
MBD3-211ENST00000592965 ARFGEF2Q9Y6D5 1785 aa30.66■■■□□ 2.5
MBD3-211ENST00000592965 NPHP1O15259 732 aa30.66■■■□□ 2.5
MBD3-211ENST00000592965 RIPK4P57078 832 aa30.66■■■□□ 2.5
MBD3-211ENST00000592965 TMPOP42166 694 aaKnown RBP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms