RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, human

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51D-223	ENST00000592928	STARD3NL	O95772	234 aa		12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	NEFM	P07197	916 aa		12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	FMNL2	Q96PY5	1086 aa		12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	PLEKHF1	Q96S99	279 aa		12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	BRCA1	P38398	1863 aa	Known RBP	12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.84	□□□□□ -0.35
RAD51D-223	ENST00000592928	BTBD11	A6QL63	1104 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	TGFB2	P61812	414 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	DDX10	Q13206	875 aa	Known RBP	12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	FKBP8	Q14318	412 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	NARF	Q9UHQ1	456 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	PARP3	Q9Y6F1	533 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	LAMB4	A4D0S4	1761 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	KDM3B	Q7LBC6	1761 aa		12.83	□□□□□ -0.36
RAD51D-223	ENST00000592928	BCOR	Q6W2J9	1755 aa		12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	ZPR1	O75312	459 aa		12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	EIF5	P55010	431 aa	Known RBP	12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	DDR1	Q08345	913 aa		12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	MCM10	Q7L590	875 aa		12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	PNN	Q9H307	717 aa	Known RBP	12.82	□□□□□ -0.36
RAD51D-223	ENST00000592928	POLRMT	O00411	1230 aa	Known RBP	12.81	□□□□□ -0.36
RAD51D-223	ENST00000592928	IL6ST	P40189	918 aa	Predicted RBP	12.81	□□□□□ -0.36
RAD51D-223	ENST00000592928	USPL1	Q5W0Q7	1092 aa		12.81	□□□□□ -0.36
RAD51D-223	ENST00000592928	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.81	□□□□□ -0.36
RAD51D-223	ENST00000592928	AFDN	P55196	1824 aa	Known RBP	12.81	□□□□□ -0.36
RAD51D-223	ENST00000592928		A0A087WZG4	1122 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	KCNQ3	O43525	872 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	CANX	P27824	592 aa	Known RBP	12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	TM4SF1	P30408	202 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	DCTN1	Q14203	1278 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	NFE2L2	Q16236	605 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	BCL2L12	Q9HB09	334 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	MAPK8IP3	Q9UPT6	1336 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	ADCY9	O60503	1353 aa		12.8	□□□□□ -0.36
RAD51D-223	ENST00000592928	ARFGEF1	Q9Y6D6	1849 aa		12.79	□□□□□ -0.36
RAD51D-223	ENST00000592928	DLEC1	Q9Y238	1755 aa		12.79	□□□□□ -0.36
RAD51D-223	ENST00000592928	SNRPA1	P09661	255 aa	Known RBP	12.78	□□□□□ -0.36
RAD51D-223	ENST00000592928	NFIX	Q14938	502 aa		12.78	□□□□□ -0.36
RAD51D-223	ENST00000592928	TAF7	Q15545	349 aa	Predicted RBP	12.78	□□□□□ -0.36
RAD51D-223	ENST00000592928	PNISR	Q8TF01	805 aa	Known RBP	12.78	□□□□□ -0.36
RAD51D-223	ENST00000592928	A1BG	P04217	495 aa		12.76	□□□□□ -0.37
RAD51D-223	ENST00000592928	DPEP1	P16444	411 aa		12.76	□□□□□ -0.37
RAD51D-223	ENST00000592928	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.76	□□□□□ -0.37
RAD51D-223	ENST00000592928	USP16	Q9Y5T5	823 aa		12.76	□□□□□ -0.37
RAD51D-223	ENST00000592928		A0A0G2JLW4	131 aa		12.75	□□□□□ -0.37
RAD51D-223	ENST00000592928	RGL2	O15211	777 aa		12.75	□□□□□ -0.37
RAD51D-223	ENST00000592928	KCNA3	P22001	575 aa		12.75	□□□□□ -0.37
RAD51D-223	ENST00000592928	CARMIL3	Q8ND23	1372 aa		12.75	□□□□□ -0.37
RAD51D-223	ENST00000592928	ATP10D	Q9P241	1426 aa		12.75	□□□□□ -0.37
RAD51D-223	ENST00000592928	WWC3	Q9ULE0	1092 aa		12.75	□□□□□ -0.37
RAD51D-223	ENST00000592928	PRAMEF22	A3QJZ6	481 aa		12.74	□□□□□ -0.37
RAD51D-223	ENST00000592928	CAMTA2	O94983	1202 aa		12.74	□□□□□ -0.37
RAD51D-223	ENST00000592928	SERPINB2	P05120	415 aa		12.74	□□□□□ -0.37
RAD51D-223	ENST00000592928	LMOD3	Q0VAK6	560 aa		12.74	□□□□□ -0.37
RAD51D-223	ENST00000592928	NPM2	Q86SE8	214 aa	Known RBP	12.74	□□□□□ -0.37
RAD51D-223	ENST00000592928	BCS1L	Q9Y276	419 aa		12.74	□□□□□ -0.37
RAD51D-223	ENST00000592928	TMPO	P42166	694 aa	Known RBP	12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	TBC1D9B	Q66K14	1250 aa		12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	DZIP3	Q86Y13	1208 aa	Known RBP	12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	THUMPD2	Q9BTF0	503 aa	Known RBP	12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	PIM2	Q9P1W9	311 aa		12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	TBC1D2B	Q9UPU7	963 aa		12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	ANKRD31	Q8N7Z5	1873 aa		12.73	□□□□□ -0.37
RAD51D-223	ENST00000592928	COL11A2	P13942	1736 aa	Predicted RBP	12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	NBPF26	B4DH59	902 aa		12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	GIGYF1	O75420	1035 aa	Predicted RBP	12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	EIF4A1	P60842	406 aa	Known RBP	12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	WDR43	Q15061	677 aa	Known RBP eCLIP	12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	NBPF10	Q6P3W6	841 aa	Known RBP	12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	NBPF15	Q8N660	670 aa		12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	BABAM1	Q9NWV8	329 aa		12.72	□□□□□ -0.37
RAD51D-223	ENST00000592928	ERBB4	Q15303	1308 aa		12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	CHRNA5	P30532	468 aa		12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	RIPK4	P57078	832 aa		12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	DALRD3	Q5D0E6	543 aa	Known RBP	12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	CLEC4G	Q6UXB4	293 aa		12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	MIS18A	Q9NYP9	233 aa		12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	ZNF652	Q9Y2D9	606 aa		12.71	□□□□□ -0.37
RAD51D-223	ENST00000592928	PIP4K2A	P48426	406 aa	Predicted RBP	12.7	□□□□□ -0.38
RAD51D-223	ENST00000592928	PRR5L	Q6MZQ0	368 aa		12.7	□□□□□ -0.38
RAD51D-223	ENST00000592928	BICDL1	Q6ZP65	573 aa		12.7	□□□□□ -0.38
RAD51D-223	ENST00000592928	RUNDC1	Q96C34	613 aa		12.7	□□□□□ -0.38
RAD51D-223	ENST00000592928	TSPYL4	Q9UJ04	414 aa		12.7	□□□□□ -0.38
RAD51D-223	ENST00000592928	PDZRN3	Q9UPQ7	1066 aa		12.7	□□□□□ -0.38
RAD51D-223	ENST00000592928	SETDB2	Q96T68	719 aa		12.69	□□□□□ -0.38
RAD51D-223	ENST00000592928	ARFGEF2	Q9Y6D5	1785 aa		12.69	□□□□□ -0.38
RAD51D-223	ENST00000592928	CCDC146	Q8IYE0	955 aa		12.68	□□□□□ -0.38
RAD51D-223	ENST00000592928	CNBD1	Q8NA66	436 aa		12.68	□□□□□ -0.38
RAD51D-223	ENST00000592928	BRIP1	Q9BX63	1249 aa		12.68	□□□□□ -0.38
RAD51D-223	ENST00000592928	ADAMTS8	Q9UP79	889 aa		12.68	□□□□□ -0.38
RAD51D-223	ENST00000592928		H0YIN7	160 aa		12.67	□□□□□ -0.38
RAD51D-223	ENST00000592928	PDE6B	P35913	854 aa		12.67	□□□□□ -0.38
RAD51D-223	ENST00000592928	ARHGAP27	Q6ZUM4	889 aa		12.67	□□□□□ -0.38
RAD51D-223	ENST00000592928	C2CD5	Q86YS7	1000 aa		12.67	□□□□□ -0.38
RAD51D-223	ENST00000592928	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.67	□□□□□ -0.38
RAD51D-223	ENST00000592928	C1QTNF8	P60827	252 aa		12.66	□□□□□ -0.38
RAD51D-223	ENST00000592928	ST5	P78524	1137 aa		12.66	□□□□□ -0.38

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