RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
APOC1-209ENST00000592885 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
APOC1-209ENST00000592885 HEG1Q9ULI3 1381 aa17.78■□□□□ 0.44
APOC1-209ENST00000592885 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
APOC1-209ENST00000592885 A0A0G2JLW4 131 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
APOC1-209ENST00000592885 STARD3NLO95772 234 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 DPEP1P16444 411 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 TM4SF1P30408 202 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 USPL1Q5W0Q7 1092 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 ZNF790Q6PG37 636 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 TEX13AQ9BXU3 409 aaPredicted RBP17.77■□□□□ 0.44
APOC1-209ENST00000592885 GPBP1L1Q9HC44 474 aaPredicted RBP17.77■□□□□ 0.44
APOC1-209ENST00000592885 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
APOC1-209ENST00000592885 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
APOC1-209ENST00000592885 BCS1LQ9Y276 419 aa17.76■□□□□ 0.43
APOC1-209ENST00000592885 A0A087WZG4 1122 aa17.75■□□□□ 0.43
APOC1-209ENST00000592885 FCHSD2O94868 740 aa17.75■□□□□ 0.43
APOC1-209ENST00000592885 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
APOC1-209ENST00000592885 ZNF496Q96IT1 587 aaPredicted RBP17.74■□□□□ 0.43
APOC1-209ENST00000592885 FMNL2Q96PY5 1086 aa17.74■□□□□ 0.43
APOC1-209ENST00000592885 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
APOC1-209ENST00000592885 U2AF1L5P0DN76 240 aaPredicted RBP17.73■□□□□ 0.43
APOC1-209ENST00000592885 KCNA3P22001 575 aa17.73■□□□□ 0.43
APOC1-209ENST00000592885 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
APOC1-209ENST00000592885 U2AF1Q01081 240 aaKnown RBP eCLIP17.73■□□□□ 0.43
APOC1-209ENST00000592885 PHACTR3Q96KR7 559 aa17.73■□□□□ 0.43
APOC1-209ENST00000592885 BCORQ6W2J9 1755 aa17.72■□□□□ 0.43
APOC1-209ENST00000592885 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
APOC1-209ENST00000592885 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
APOC1-209ENST00000592885 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
APOC1-209ENST00000592885 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.43
APOC1-209ENST00000592885 NFIXQ14938 502 aa17.71■□□□□ 0.43
APOC1-209ENST00000592885 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
APOC1-209ENST00000592885 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
APOC1-209ENST00000592885 BCL2L12Q9HB09 334 aa17.71■□□□□ 0.43
APOC1-209ENST00000592885 ARHGAP27Q6ZUM4 889 aa17.69■□□□□ 0.42
APOC1-209ENST00000592885 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
APOC1-209ENST00000592885 SERPINB2P05120 415 aa17.68■□□□□ 0.42
APOC1-209ENST00000592885 DLG5Q8TDM6 1919 aa17.67■□□□□ 0.42
APOC1-209ENST00000592885 NEFMP07197 916 aa17.67■□□□□ 0.42
APOC1-209ENST00000592885 CHRNA5P30532 468 aa17.67■□□□□ 0.42
APOC1-209ENST00000592885 NPM2Q86SE8 214 aaKnown RBP17.67■□□□□ 0.42
APOC1-209ENST00000592885 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
APOC1-209ENST00000592885 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
APOC1-209ENST00000592885 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
APOC1-209ENST00000592885 ANKRD31Q8N7Z5 1873 aa17.66■□□□□ 0.42
APOC1-209ENST00000592885 KDM3BQ7LBC6 1761 aa17.66■□□□□ 0.42
APOC1-209ENST00000592885 SBF1O95248 1867 aa17.65■□□□□ 0.42
APOC1-209ENST00000592885 MCM10Q7L590 875 aa17.65■□□□□ 0.42
APOC1-209ENST00000592885 SNRPA1P09661 255 aaKnown RBP17.64■□□□□ 0.41
APOC1-209ENST00000592885 KIF3CO14782 793 aa17.63■□□□□ 0.41
APOC1-209ENST00000592885 RGL2O15211 777 aa17.63■□□□□ 0.41
APOC1-209ENST00000592885 KCNQ3O43525 872 aa17.63■□□□□ 0.41
APOC1-209ENST00000592885 A1BGP04217 495 aa17.63■□□□□ 0.41
APOC1-209ENST00000592885 TBC1D9BQ66K14 1250 aa17.63■□□□□ 0.41
APOC1-209ENST00000592885 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
APOC1-209ENST00000592885 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
APOC1-209ENST00000592885 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
APOC1-209ENST00000592885 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
APOC1-209ENST00000592885 COL11A2P13942 1736 aaPredicted RBP17.63■□□□□ 0.41
APOC1-209ENST00000592885 C9orf131Q5VYM1 1079 aa17.62■□□□□ 0.41
APOC1-209ENST00000592885 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
APOC1-209ENST00000592885 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 H0YIN7 160 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 CAMTA2O94983 1202 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
APOC1-209ENST00000592885 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 DZIP3Q86Y13 1208 aaKnown RBP17.61■□□□□ 0.41
APOC1-209ENST00000592885 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
APOC1-209ENST00000592885 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
APOC1-209ENST00000592885 HSPA6P17066 643 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 PDE6BP35913 854 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 CLEC4GQ6UXB4 293 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 SETDB2Q96T68 719 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 BRIP1Q9BX63 1249 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 RNF181Q9P0P0 153 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
APOC1-209ENST00000592885 TIAM2Q8IVF5 1701 aa17.59■□□□□ 0.41
APOC1-209ENST00000592885 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
APOC1-209ENST00000592885 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
APOC1-209ENST00000592885 RALBP1Q15311 655 aa17.59■□□□□ 0.41
APOC1-209ENST00000592885 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
APOC1-209ENST00000592885 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
APOC1-209ENST00000592885 NFE2L2Q16236 605 aa17.58■□□□□ 0.4
APOC1-209ENST00000592885 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
APOC1-209ENST00000592885 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
APOC1-209ENST00000592885 TOMM70O94826 608 aa17.57■□□□□ 0.4
APOC1-209ENST00000592885 ST5P78524 1137 aa17.57■□□□□ 0.4
APOC1-209ENST00000592885 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
APOC1-209ENST00000592885 NPHP1O15259 732 aa17.55■□□□□ 0.4
APOC1-209ENST00000592885 LMNB1P20700 586 aa17.55■□□□□ 0.4
APOC1-209ENST00000592885 NMRK2Q9NPI5 230 aa17.55■□□□□ 0.4
APOC1-209ENST00000592885 DICER1Q9UPY3 1922 aaKnown RBP17.55■□□□□ 0.4
APOC1-209ENST00000592885 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
APOC1-209ENST00000592885 RASSF7Q02833 373 aa17.54■□□□□ 0.4
APOC1-209ENST00000592885 STYK1Q6J9G0 422 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms