RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 RASSF7Q02833 373 aa12.48□□□□□ -0.41
APOC1-207ENST00000592176 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
APOC1-207ENST00000592176 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
APOC1-207ENST00000592176 H0YIN7 160 aa12.47□□□□□ -0.41
APOC1-207ENST00000592176 RNMTO43148 476 aaKnown RBP12.47□□□□□ -0.41
APOC1-207ENST00000592176 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
APOC1-207ENST00000592176 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.41
APOC1-207ENST00000592176 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
APOC1-207ENST00000592176 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
APOC1-207ENST00000592176 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
APOC1-207ENST00000592176 HMOX1P09601 288 aa12.45□□□□□ -0.42
APOC1-207ENST00000592176 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
APOC1-207ENST00000592176 TNS4Q8IZW8 715 aa12.45□□□□□ -0.42
APOC1-207ENST00000592176 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
APOC1-207ENST00000592176 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
APOC1-207ENST00000592176 ZBTB1Q9Y2K1 713 aa12.45□□□□□ -0.42
APOC1-207ENST00000592176 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
APOC1-207ENST00000592176 CAPN15O75808 1086 aa12.44□□□□□ -0.42
APOC1-207ENST00000592176 STARD3NLO95772 234 aa12.44□□□□□ -0.42
APOC1-207ENST00000592176 PRELPP51888 382 aa12.44□□□□□ -0.42
APOC1-207ENST00000592176 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
APOC1-207ENST00000592176 BICDL1Q6ZP65 573 aa12.44□□□□□ -0.42
APOC1-207ENST00000592176 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
APOC1-207ENST00000592176 A0A087WZG4 1122 aa12.43□□□□□ -0.42
APOC1-207ENST00000592176 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
APOC1-207ENST00000592176 COL15A1P39059 1388 aa12.43□□□□□ -0.42
APOC1-207ENST00000592176 ARFGEF1Q9Y6D6 1849 aa12.42□□□□□ -0.42
APOC1-207ENST00000592176 POTECB2RU33 542 aa12.42□□□□□ -0.42
APOC1-207ENST00000592176 NFKBIEO00221 500 aa12.42□□□□□ -0.42
APOC1-207ENST00000592176 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
APOC1-207ENST00000592176 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
APOC1-207ENST00000592176 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
APOC1-207ENST00000592176 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
APOC1-207ENST00000592176 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
APOC1-207ENST00000592176 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
APOC1-207ENST00000592176 PDE6BP35913 854 aa12.41□□□□□ -0.42
APOC1-207ENST00000592176 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
APOC1-207ENST00000592176 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
APOC1-207ENST00000592176 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
APOC1-207ENST00000592176 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
APOC1-207ENST00000592176 C21orf2O43822 256 aa12.4□□□□□ -0.42
APOC1-207ENST00000592176 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
APOC1-207ENST00000592176 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
APOC1-207ENST00000592176 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
APOC1-207ENST00000592176 TBC1D9BQ66K14 1250 aa12.4□□□□□ -0.42
APOC1-207ENST00000592176 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
APOC1-207ENST00000592176 CCDC24Q8N4L8 307 aa12.39□□□□□ -0.43
APOC1-207ENST00000592176 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
APOC1-207ENST00000592176 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
APOC1-207ENST00000592176 TJP1Q07157 1748 aa12.39□□□□□ -0.43
APOC1-207ENST00000592176 TEFQ10587 303 aa12.38□□□□□ -0.43
APOC1-207ENST00000592176 IL17REQ8NFR9 667 aa12.38□□□□□ -0.43
APOC1-207ENST00000592176 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
APOC1-207ENST00000592176 NPHP1O15259 732 aa12.37□□□□□ -0.43
APOC1-207ENST00000592176 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
APOC1-207ENST00000592176 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
APOC1-207ENST00000592176 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
APOC1-207ENST00000592176 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
APOC1-207ENST00000592176 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
APOC1-207ENST00000592176 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
APOC1-207ENST00000592176 CARMIL3Q8ND23 1372 aa12.37□□□□□ -0.43
APOC1-207ENST00000592176 SBF1O95248 1867 aa12.36□□□□□ -0.43
APOC1-207ENST00000592176 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
APOC1-207ENST00000592176 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
APOC1-207ENST00000592176 A1BGP04217 495 aa12.36□□□□□ -0.43
APOC1-207ENST00000592176 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
APOC1-207ENST00000592176 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
APOC1-207ENST00000592176 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
APOC1-207ENST00000592176 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
APOC1-207ENST00000592176 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
APOC1-207ENST00000592176 STYK1Q6J9G0 422 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 CNBD1Q8NA66 436 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
APOC1-207ENST00000592176 SCN11AQ9UI33 1791 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
APOC1-207ENST00000592176 HEG1Q9ULI3 1381 aa12.34□□□□□ -0.43
APOC1-207ENST00000592176 SRGNP10124 158 aa12.34□□□□□ -0.43
APOC1-207ENST00000592176 ST5P78524 1137 aa12.34□□□□□ -0.43
APOC1-207ENST00000592176 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
APOC1-207ENST00000592176 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
APOC1-207ENST00000592176 MRC1P22897 1456 aa12.34□□□□□ -0.43
APOC1-207ENST00000592176 BTBD11A6QL63 1104 aa12.33□□□□□ -0.44
APOC1-207ENST00000592176 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
APOC1-207ENST00000592176 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
APOC1-207ENST00000592176 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
APOC1-207ENST00000592176 NRXN2Q9P2S2 1712 aa12.32□□□□□ -0.44
APOC1-207ENST00000592176 IQCA1LA6NCM1 817 aa12.32□□□□□ -0.44
APOC1-207ENST00000592176 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
APOC1-207ENST00000592176 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
APOC1-207ENST00000592176 CNGB1Q14028 1251 aaPredicted RBP12.32□□□□□ -0.44
APOC1-207ENST00000592176 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
APOC1-207ENST00000592176 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
APOC1-207ENST00000592176 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
APOC1-207ENST00000592176 KCNQ3O43525 872 aa12.31□□□□□ -0.44
APOC1-207ENST00000592176 CLEC4GQ6UXB4 293 aa12.31□□□□□ -0.44
APOC1-207ENST00000592176 NBPF5PQ86XG9 351 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms