RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 PDZRN3Q9UPQ7 1066 aa20.63■□□□□ 0.89
CXXC1-217ENST00000592078 CCDC184Q52MB2 194 aa20.62■□□□□ 0.89
CXXC1-217ENST00000592078 SULT6B1Q6IMI4 303 aa20.62■□□□□ 0.89
CXXC1-217ENST00000592078 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
CXXC1-217ENST00000592078 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
CXXC1-217ENST00000592078 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
CXXC1-217ENST00000592078 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
CXXC1-217ENST00000592078 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
CXXC1-217ENST00000592078 DDR1Q08345 913 aa20.6■□□□□ 0.89
CXXC1-217ENST00000592078 SLC52A2Q9HAB3 445 aa20.6■□□□□ 0.89
CXXC1-217ENST00000592078 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
CXXC1-217ENST00000592078 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
CXXC1-217ENST00000592078 TNRC6CQ9HCJ0 1690 aaKnown RBP20.59■□□□□ 0.89
CXXC1-217ENST00000592078 LMNB1P20700 586 aa20.59■□□□□ 0.89
CXXC1-217ENST00000592078 VEGFAP15692 232 aaPredicted RBP20.58■□□□□ 0.89
CXXC1-217ENST00000592078 RRAGCQ9HB90 399 aa20.58■□□□□ 0.89
CXXC1-217ENST00000592078 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
CXXC1-217ENST00000592078 IL13P35225 146 aa20.57■□□□□ 0.88
CXXC1-217ENST00000592078 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
CXXC1-217ENST00000592078 KCPQ6ZWJ8 1503 aa20.57■□□□□ 0.88
CXXC1-217ENST00000592078 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
CXXC1-217ENST00000592078 CYP19A1P11511 503 aaPredicted RBP20.56■□□□□ 0.88
CXXC1-217ENST00000592078 CHRNA5P30532 468 aa20.56■□□□□ 0.88
CXXC1-217ENST00000592078 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
CXXC1-217ENST00000592078 TTLL6Q8N841 843 aa20.56■□□□□ 0.88
CXXC1-217ENST00000592078 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
CXXC1-217ENST00000592078 SCN11AQ9UI33 1791 aa20.55■□□□□ 0.88
CXXC1-217ENST00000592078 A0A087WZG4 1122 aa20.55■□□□□ 0.88
CXXC1-217ENST00000592078 DPY19L2Q6NUT2 758 aa20.55■□□□□ 0.88
CXXC1-217ENST00000592078 CFAP53Q96M91 514 aa20.55■□□□□ 0.88
CXXC1-217ENST00000592078 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
CXXC1-217ENST00000592078 TJP1Q07157 1748 aa20.55■□□□□ 0.88
CXXC1-217ENST00000592078 H0YIN7 160 aa20.54■□□□□ 0.88
CXXC1-217ENST00000592078 STARD3NLO95772 234 aa20.54■□□□□ 0.88
CXXC1-217ENST00000592078 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
CXXC1-217ENST00000592078 TEX13AQ9BXU3 409 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-217ENST00000592078 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-217ENST00000592078 SERPINB2P05120 415 aa20.53■□□□□ 0.88
CXXC1-217ENST00000592078 COL15A1P39059 1388 aa20.53■□□□□ 0.88
CXXC1-217ENST00000592078 MRC1P22897 1456 aa20.52■□□□□ 0.88
CXXC1-217ENST00000592078 RNMTO43148 476 aaKnown RBP20.52■□□□□ 0.88
CXXC1-217ENST00000592078 NFIXQ14938 502 aa20.52■□□□□ 0.88
CXXC1-217ENST00000592078 SBF1O95248 1867 aa20.52■□□□□ 0.87
CXXC1-217ENST00000592078 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
CXXC1-217ENST00000592078 DIAPH1O60610 1272 aaKnown RBP20.5■□□□□ 0.87
CXXC1-217ENST00000592078 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
CXXC1-217ENST00000592078 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
CXXC1-217ENST00000592078 PDE6BP35913 854 aa20.49■□□□□ 0.87
CXXC1-217ENST00000592078 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
CXXC1-217ENST00000592078 C2CD5Q86YS7 1000 aa20.48■□□□□ 0.87
CXXC1-217ENST00000592078 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
CXXC1-217ENST00000592078 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
CXXC1-217ENST00000592078 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
CXXC1-217ENST00000592078 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
CXXC1-217ENST00000592078 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
CXXC1-217ENST00000592078 SOGA3Q5TF21 947 aa20.46■□□□□ 0.87
CXXC1-217ENST00000592078 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
CXXC1-217ENST00000592078 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
CXXC1-217ENST00000592078 COL13A1Q5TAT6 717 aaPredicted RBP20.45■□□□□ 0.86
CXXC1-217ENST00000592078 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
CXXC1-217ENST00000592078 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
CXXC1-217ENST00000592078 RASSF7Q02833 373 aa20.44■□□□□ 0.86
CXXC1-217ENST00000592078 LTBP3Q9NS15 1303 aa20.44■□□□□ 0.86
CXXC1-217ENST00000592078 AFDNP55196 1824 aaKnown RBP20.43■□□□□ 0.86
CXXC1-217ENST00000592078 HTRA3P83110 453 aa20.43■□□□□ 0.86
CXXC1-217ENST00000592078 TEFQ10587 303 aa20.43■□□□□ 0.86
CXXC1-217ENST00000592078 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
CXXC1-217ENST00000592078 ADAMTS8Q9UP79 889 aa20.43■□□□□ 0.86
CXXC1-217ENST00000592078 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
CXXC1-217ENST00000592078 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
CXXC1-217ENST00000592078 PRELPP51888 382 aa20.42■□□□□ 0.86
CXXC1-217ENST00000592078 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
CXXC1-217ENST00000592078 CNKSR1Q969H4 720 aa20.42■□□□□ 0.86
CXXC1-217ENST00000592078 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
CXXC1-217ENST00000592078 NFKBIEO00221 500 aa20.41■□□□□ 0.86
CXXC1-217ENST00000592078 HMOX1P09601 288 aa20.41■□□□□ 0.86
CXXC1-217ENST00000592078 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
CXXC1-217ENST00000592078 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
CXXC1-217ENST00000592078 ZNF790Q6PG37 636 aa20.4■□□□□ 0.86
CXXC1-217ENST00000592078 ZNF622Q969S3 477 aaKnown RBP eCLIP20.4■□□□□ 0.862e-8■■■□□ 14.6
CXXC1-217ENST00000592078 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.85
CXXC1-217ENST00000592078 GNAT3A8MTJ3 354 aa20.39■□□□□ 0.85
CXXC1-217ENST00000592078 SETDB2Q96T68 719 aa20.39■□□□□ 0.85
CXXC1-217ENST00000592078 IQCA1LA6NCM1 817 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 RGL2O15211 777 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 NPHP1O15259 732 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 ST5P78524 1137 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 STYK1Q6J9G0 422 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 UBR2Q8IWV8 1755 aa20.38■□□□□ 0.85
CXXC1-217ENST00000592078 HSPA1AP0DMV8 641 aaKnown RBP20.37■□□□□ 0.85
CXXC1-217ENST00000592078 HSPA1BP0DMV9 641 aaKnown RBP20.37■□□□□ 0.85
CXXC1-217ENST00000592078 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
CXXC1-217ENST00000592078 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
CXXC1-217ENST00000592078 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
CXXC1-217ENST00000592078 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
CXXC1-217ENST00000592078 FAM9BQ8IZU0 186 aa20.37■□□□□ 0.85
CXXC1-217ENST00000592078 TAOK3Q9H2K8 898 aa20.37■□□□□ 0.85
CXXC1-217ENST00000592078 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms