RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 MNS1Q8NEH6 495 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 COG3Q96JB2 828 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 ZFYVE9O95405 1425 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 RAD50Q92878 1312 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 NFATC2IPQ8NCF5 419 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 MED4Q9NPJ6 270 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 HECW2Q9P2P5 1572 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
SMARCA4-217ENST00000591595 C16orf71Q8IYS4 520 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-217ENST00000591595 CASC1Q6TDU7 716 aa14.58□□□□□ -0.08
SMARCA4-217ENST00000591595 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-217ENST00000591595 DEF6Q9H4E7 631 aa14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 CCDC91Q7Z6B0 441 aa14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 FAM53CQ9NYF3 392 aa14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 CCDC189A1A4V9 331 aa14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 GSPT1P15170 499 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 FAM212AQ96EL1 285 aa14.57□□□□□ -0.08
SMARCA4-217ENST00000591595 FAM135BQ49AJ0 1406 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 RABEP1Q15276 862 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 PLEKHM2Q8IWE5 1019 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 ABCC4O15439 1325 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 CD163L1Q9NR16 1453 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 IL13P35225 146 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 NAA30Q147X3 362 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 KRT24Q2M2I5 525 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 PTPRMP28827 1452 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 INTS3Q68E01 1043 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 LCMT1Q9UIC8 334 aa14.56□□□□□ -0.08
SMARCA4-217ENST00000591595 SMARCA5O60264 1052 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-217ENST00000591595 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
SMARCA4-217ENST00000591595 GPT2Q8TD30 523 aa14.55□□□□□ -0.08
SMARCA4-217ENST00000591595 TMEM63CQ9P1W3 806 aa14.55□□□□□ -0.08
SMARCA4-217ENST00000591595 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
SMARCA4-217ENST00000591595 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
SMARCA4-217ENST00000591595 NCKAP5LQ9HCH0 1330 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 LRCH2Q5VUJ6 765 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 KRBA2Q6ZNG9 492 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 NEK11Q8NG66 645 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 OTUD7AQ8TE49 926 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 MED14O60244 1454 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 KIAA1524Q8TCG1 905 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 KMT5BQ4FZB7 885 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 TTC22Q5TAA0 569 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 TXLNBQ8N3L3 684 aa14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 CALR3Q96L12 384 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 RBM28Q9NW13 759 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-217ENST00000591595 NUTM2FA1L443 756 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 ST18O60284 1047 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 PRPF40AO75400 957 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 SULT6B1Q6IMI4 303 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 KIF1BPQ96EK5 621 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 DCTPP1Q9H773 170 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 ATG3Q9NT62 314 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 NUCB2P80303 420 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 SSR1P43307 286 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 E2F4Q16254 413 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 TTC31Q49AM3 519 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 CCDC191Q8NCU4 936 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
SMARCA4-217ENST00000591595 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.08
SMARCA4-217ENST00000591595 GSCP56915 257 aaPredicted RBP14.52□□□□□ -0.08
SMARCA4-217ENST00000591595 RBM6P78332 1123 aaKnown RBP14.52□□□□□ -0.08
SMARCA4-217ENST00000591595 MCM10Q7L590 875 aa14.52□□□□□ -0.08
SMARCA4-217ENST00000591595 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.08
SMARCA4-217ENST00000591595 TTC36A6NLP5 189 aa14.52□□□□□ -0.09
SMARCA4-217ENST00000591595 SMTNL1A8MU46 457 aa14.52□□□□□ -0.09
SMARCA4-217ENST00000591595 SIGLEC1Q9BZZ2 1709 aa14.52□□□□□ -0.09
SMARCA4-217ENST00000591595 WASLO00401 505 aaPredicted RBP14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 NBPF10Q6P3W6 841 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 NUDT16Q96DE0 195 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 PIK3C2BO00750 1634 aa14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 PPP1R12AO14974 1030 aaPredicted RBP14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 SDSP20132 328 aa14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 CWC15Q9P013 229 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 USP25Q9UHP3 1055 aa14.51□□□□□ -0.09
SMARCA4-217ENST00000591595 BIRC2Q13490 618 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 USP26Q9BXU7 913 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 PIK3R4Q99570 1358 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 AK9Q5TCS8 1911 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 SRLQ86TD4 932 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 RPAP2Q8IXW5 612 aaPredicted RBP14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 ANKRD44Q8N8A2 993 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 MEIS3Q99687 375 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 PYCARDQ9ULZ3 195 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 RIMS2Q9UQ26 1411 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 CFAP74Q9C0B2 1584 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 PKP1Q13835 747 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 TEX35Q5T0J7 233 aa14.5□□□□□ -0.09
SMARCA4-217ENST00000591595 PPP2R5AQ15172 486 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms