RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
VPS25-206ENST00000591584 SSH3Q8TE77 659 aa12.87□□□□□ -0.35
VPS25-206ENST00000591584 NHSL1Q5SYE7 1610 aa12.87□□□□□ -0.35
VPS25-206ENST00000591584 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
VPS25-206ENST00000591584 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
VPS25-206ENST00000591584 LINS1Q8NG48 757 aa12.86□□□□□ -0.35
VPS25-206ENST00000591584 C22orf23Q9BZE7 217 aa12.86□□□□□ -0.35
VPS25-206ENST00000591584 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
VPS25-206ENST00000591584 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
VPS25-206ENST00000591584 CDC45O75419 566 aa12.85□□□□□ -0.35
VPS25-206ENST00000591584 SEC24BO95487 1268 aa12.85□□□□□ -0.35
VPS25-206ENST00000591584 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
VPS25-206ENST00000591584 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
VPS25-206ENST00000591584 LRRFIP2Q9Y608 721 aaKnown RBP12.85□□□□□ -0.35
VPS25-206ENST00000591584 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
VPS25-206ENST00000591584 SCN11AQ9UI33 1791 aa12.84□□□□□ -0.35
VPS25-206ENST00000591584 NEXNQ0ZGT2 675 aa12.84□□□□□ -0.35
VPS25-206ENST00000591584 MTX1Q13505 466 aa12.84□□□□□ -0.35
VPS25-206ENST00000591584 POLA2Q14181 598 aa12.84□□□□□ -0.35
VPS25-206ENST00000591584 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
VPS25-206ENST00000591584 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
VPS25-206ENST00000591584 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
VPS25-206ENST00000591584 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
VPS25-206ENST00000591584 C9orf78Q9NZ63 289 aaPredicted RBP12.83□□□□□ -0.36
VPS25-206ENST00000591584 UTYO14607 1347 aa12.83□□□□□ -0.36
VPS25-206ENST00000591584 AOX1Q06278 1338 aa12.83□□□□□ -0.36
VPS25-206ENST00000591584 ADCY9O60503 1353 aa12.82□□□□□ -0.36
VPS25-206ENST00000591584 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
VPS25-206ENST00000591584 PDIA6Q15084 440 aa12.82□□□□□ -0.36
VPS25-206ENST00000591584 RIC3Q7Z5B4 369 aa12.82□□□□□ -0.36
VPS25-206ENST00000591584 IL27Q8NEV9 243 aa12.82□□□□□ -0.36
VPS25-206ENST00000591584 ZNF496Q96IT1 587 aaPredicted RBP12.82□□□□□ -0.36
VPS25-206ENST00000591584 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
VPS25-206ENST00000591584 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
VPS25-206ENST00000591584 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
VPS25-206ENST00000591584 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
VPS25-206ENST00000591584 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
VPS25-206ENST00000591584 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
VPS25-206ENST00000591584 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
VPS25-206ENST00000591584 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
VPS25-206ENST00000591584 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
VPS25-206ENST00000591584 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
VPS25-206ENST00000591584 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
VPS25-206ENST00000591584 ZBTB22O15209 634 aa12.8□□□□□ -0.36
VPS25-206ENST00000591584 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
VPS25-206ENST00000591584 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
VPS25-206ENST00000591584 STRN4Q9NRL3 753 aa12.8□□□□□ -0.36
VPS25-206ENST00000591584 GRM8O00222 908 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
VPS25-206ENST00000591584 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
VPS25-206ENST00000591584 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
VPS25-206ENST00000591584 PDE1AP54750 535 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 PROSER3Q2NL68 480 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 BTG4Q9NY30 223 aa12.79□□□□□ -0.36
VPS25-206ENST00000591584 ANXA1P04083 346 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
VPS25-206ENST00000591584 MX1P20591 662 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 C16orf71Q8IYS4 520 aaPredicted RBP12.78□□□□□ -0.36
VPS25-206ENST00000591584 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 XAGE3Q8WTP9 111 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 SNX21Q969T3 373 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 EXOC6BQ9Y2D4 811 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
VPS25-206ENST00000591584 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 COL15A1P39059 1388 aa12.78□□□□□ -0.36
VPS25-206ENST00000591584 ABCA3Q99758 1704 aa12.77□□□□□ -0.36
VPS25-206ENST00000591584 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
VPS25-206ENST00000591584 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.37
VPS25-206ENST00000591584 TOM1O60784 492 aa12.77□□□□□ -0.37
VPS25-206ENST00000591584 REC8O95072 547 aa12.77□□□□□ -0.37
VPS25-206ENST00000591584 RHPN1Q8TCX5 695 aa12.77□□□□□ -0.37
VPS25-206ENST00000591584 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
VPS25-206ENST00000591584 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
VPS25-206ENST00000591584 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.37
VPS25-206ENST00000591584 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
VPS25-206ENST00000591584 EXOC5O00471 708 aa12.76□□□□□ -0.37
VPS25-206ENST00000591584 SDSP20132 328 aa12.76□□□□□ -0.37
VPS25-206ENST00000591584 AIMP1Q12904 312 aaKnown RBP12.76□□□□□ -0.37
VPS25-206ENST00000591584 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
VPS25-206ENST00000591584 TMOD3Q9NYL9 352 aa12.76□□□□□ -0.37
VPS25-206ENST00000591584 LTBP4Q8N2S1 1624 aa12.76□□□□□ -0.37
VPS25-206ENST00000591584 NEURL1BA8MQ27 555 aa12.75□□□□□ -0.37
VPS25-206ENST00000591584 APBB1O00213 710 aa12.75□□□□□ -0.37
VPS25-206ENST00000591584 MYL6BP14649 208 aa12.75□□□□□ -0.37
VPS25-206ENST00000591584 GCKRQ14397 625 aa12.75□□□□□ -0.37
VPS25-206ENST00000591584 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
VPS25-206ENST00000591584 TNS2Q63HR2 1409 aa12.74□□□□□ -0.37
VPS25-206ENST00000591584 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
VPS25-206ENST00000591584 ERC2O15083 957 aa12.74□□□□□ -0.37
VPS25-206ENST00000591584 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
VPS25-206ENST00000591584 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
VPS25-206ENST00000591584 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
VPS25-206ENST00000591584 GPATCH3Q96I76 525 aa12.74□□□□□ -0.37
VPS25-206ENST00000591584 MYD88Q99836 296 aa12.74□□□□□ -0.37
VPS25-206ENST00000591584 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
VPS25-206ENST00000591584 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
VPS25-206ENST00000591584 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms