RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 TERF1P54274 439 aa17.43■□□□□ 0.38
PRKCSH-212ENST00000591462 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-212ENST00000591462 NOL8Q76FK4 1167 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-212ENST00000591462 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
PRKCSH-212ENST00000591462 ZMYND15Q9H091 742 aa17.42■□□□□ 0.38
PRKCSH-212ENST00000591462 PDCL3Q9H2J4 239 aa17.42■□□□□ 0.38
PRKCSH-212ENST00000591462 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 GNAI2P04899 355 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 MAP3K19Q56UN5 1328 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 SPATA31A3Q5VYP0 1347 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 MBD3O95983 291 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 MX1P20591 662 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 CHMLP26374 656 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 USP6P35125 1406 aa17.41■□□□□ 0.38
PRKCSH-212ENST00000591462 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 UNC5CLQ8IV45 518 aa17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 NUTM2BA6NNL0 878 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 NUTM2EB1AL46 878 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 MCM2P49736 904 aa17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 NUTM2AQ8IVF1 878 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 IL25Q9H293 177 aa17.4■□□□□ 0.38
PRKCSH-212ENST00000591462 SOX12O15370 315 aa17.39■□□□□ 0.37
PRKCSH-212ENST00000591462 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
PRKCSH-212ENST00000591462 JCADQ9P266 1359 aa17.39■□□□□ 0.37
PRKCSH-212ENST00000591462 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.37
PRKCSH-212ENST00000591462 INTS4Q96HW7 963 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-212ENST00000591462 GADD45BO75293 160 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-212ENST00000591462 ANAPC15P60006 121 aa17.38■□□□□ 0.37
PRKCSH-212ENST00000591462 RILPL2Q969X0 211 aa17.38■□□□□ 0.37
PRKCSH-212ENST00000591462 UPF3BQ9BZI7 483 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-212ENST00000591462 USP31Q70CQ4 1352 aa17.38■□□□□ 0.37
PRKCSH-212ENST00000591462 FOXD4L6Q3SYB3 417 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-212ENST00000591462 FOXD4L3Q6VB84 417 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-212ENST00000591462 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
PRKCSH-212ENST00000591462 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
PRKCSH-212ENST00000591462 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
PRKCSH-212ENST00000591462 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 ARHGEF10O15013 1369 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 MCCP23508 829 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 MCM5P33992 734 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 FLIIQ13045 1269 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 LRP6O75581 1613 aa17.36■□□□□ 0.37
PRKCSH-212ENST00000591462 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 PKNOX2Q96KN3 472 aa17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 UQCRHLA0A096LP55 91 aa17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 UQCRHP07919 91 aa17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
PRKCSH-212ENST00000591462 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-212ENST00000591462 ADAMTS2O95450 1211 aa17.34■□□□□ 0.37
PRKCSH-212ENST00000591462 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-212ENST00000591462 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-212ENST00000591462 KDRP35968 1356 aa17.33■□□□□ 0.37
PRKCSH-212ENST00000591462 GNAI3P08754 354 aa17.33■□□□□ 0.36
PRKCSH-212ENST00000591462 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
PRKCSH-212ENST00000591462 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
PRKCSH-212ENST00000591462 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.36
PRKCSH-212ENST00000591462 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-212ENST00000591462 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
PRKCSH-212ENST00000591462 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
PRKCSH-212ENST00000591462 HSPA4P34932 840 aa17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 NLRP6P59044 892 aa17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 EYA1Q99502 592 aa17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■□□□□ 9.2
PRKCSH-212ENST00000591462 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 MED1Q15648 1581 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
PRKCSH-212ENST00000591462 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
PRKCSH-212ENST00000591462 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
PRKCSH-212ENST00000591462 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 SYAP1Q96A49 352 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 COL22A1Q8NFW1 1626 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 SPATA31A6Q5VVP1 1343 aa17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 FLT4P35916 1363 aa17.29■□□□□ 0.36
PRKCSH-212ENST00000591462 MPNDQ8N594 471 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 AOX1Q06278 1338 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 TMEM87AQ8NBN3 555 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 PI4K2BQ8TCG2 481 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 TCHHQ07283 1943 aa17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-212ENST00000591462 PTMAP06454 111 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-212ENST00000591462 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms