RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 DBF4Q9UBU7 674 aaPredicted RBP14.06□□□□□ -0.16
TPM4-213ENST00000591226 PLEKHG2Q9H7P9 1386 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 PI4KAP2A4QPH2 592 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 PI4KAP1Q8N8J0 262 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 DNAAF4Q8WXU2 420 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 SRCIN1Q9C0H9 1055 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 ADCY9O60503 1353 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 NHSL1Q5SYE7 1610 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 WDR17Q8IZU2 1322 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 GSPT1P15170 499 aaKnown RBP14.05□□□□□ -0.16
TPM4-213ENST00000591226 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
TPM4-213ENST00000591226 PNMA6EA0A0J9YXQ4 647 aa14.04□□□□□ -0.16
TPM4-213ENST00000591226 UBTFL1P0CB47 393 aaPredicted RBP14.04□□□□□ -0.16
TPM4-213ENST00000591226 C22orf23Q9BZE7 217 aa14.04□□□□□ -0.16
TPM4-213ENST00000591226 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
TPM4-213ENST00000591226 C5P01031 1676 aa14.04□□□□□ -0.16
TPM4-213ENST00000591226 MRC1P22897 1456 aa14.04□□□□□ -0.16
TPM4-213ENST00000591226 BEND3Q5T5X7 828 aa14.04□□□□□ -0.16
TPM4-213ENST00000591226 ATP8B2P98198 1209 aa14.03□□□□□ -0.16
TPM4-213ENST00000591226 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
TPM4-213ENST00000591226 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
TPM4-213ENST00000591226 EXOC6BQ9Y2D4 811 aa14.03□□□□□ -0.16
TPM4-213ENST00000591226 TTC22Q5TAA0 569 aa14.02□□□□□ -0.16
TPM4-213ENST00000591226 TBC1D9Q6ZT07 1266 aa14.02□□□□□ -0.16
TPM4-213ENST00000591226 PARP4Q9UKK3 1724 aaKnown RBP14.02□□□□□ -0.16
TPM4-213ENST00000591226 MAP3K2Q9Y2U5 619 aa14.01□□□□□ -0.17
TPM4-213ENST00000591226 HSP90AB1P08238 724 aaKnown RBP14□□□□□ -0.17
TPM4-213ENST00000591226 NBPF7P0C2Y1 421 aaPredicted RBP14□□□□□ -0.17
TPM4-213ENST00000591226 BECN1Q14457 450 aa14□□□□□ -0.17
TPM4-213ENST00000591226 PDIA6Q15084 440 aa14□□□□□ -0.17
TPM4-213ENST00000591226 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
TPM4-213ENST00000591226 DDX21Q9NR30 783 aaKnown RBP eCLIP14□□□□□ -0.17
TPM4-213ENST00000591226 HYPKQ9NX55 129 aa14□□□□□ -0.17
TPM4-213ENST00000591226 CDC45O75419 566 aa14□□□□□ -0.17
TPM4-213ENST00000591226 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
TPM4-213ENST00000591226 STRN4Q9NRL3 753 aa13.99□□□□□ -0.17
TPM4-213ENST00000591226 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
TPM4-213ENST00000591226 CABP4P57796 275 aa13.99□□□□□ -0.17
TPM4-213ENST00000591226 ZCRB1Q8TBF4 217 aaKnown RBP13.99□□□□□ -0.17
TPM4-213ENST00000591226 LARP1Q6PKG0 1096 aaKnown RBP13.98□□□□□ -0.17
TPM4-213ENST00000591226 TTC5Q8N0Z6 440 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 AIMP1Q12904 312 aaKnown RBP13.98□□□□□ -0.17
TPM4-213ENST00000591226 PPP1R42Q7Z4L9 355 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 SSH3Q8TE77 659 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 CARD10Q9BWT7 1032 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
TPM4-213ENST00000591226 MYL6BP14649 208 aa13.97□□□□□ -0.17
TPM4-213ENST00000591226 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
TPM4-213ENST00000591226 IL2RBP14784 551 aa13.97□□□□□ -0.17
TPM4-213ENST00000591226 SDSP20132 328 aa13.97□□□□□ -0.17
TPM4-213ENST00000591226 PDE1AP54750 535 aa13.97□□□□□ -0.17
TPM4-213ENST00000591226 POLA2Q14181 598 aa13.97□□□□□ -0.17
TPM4-213ENST00000591226 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
TPM4-213ENST00000591226 GLI3P10071 1580 aa13.96□□□□□ -0.17
TPM4-213ENST00000591226 SALL3Q9BXA9 1300 aa13.96□□□□□ -0.17
TPM4-213ENST00000591226 ALDH1L1O75891 902 aa13.96□□□□□ -0.17
TPM4-213ENST00000591226 DDX58O95786 925 aaKnown RBP13.96□□□□□ -0.17
TPM4-213ENST00000591226 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
TPM4-213ENST00000591226 EVA1CP58658 441 aa13.96□□□□□ -0.17
TPM4-213ENST00000591226 CWF19L2Q2TBE0 894 aaKnown RBP13.96□□□□□ -0.17
TPM4-213ENST00000591226 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
TPM4-213ENST00000591226 SHANK3Q9BYB0 1731 aa13.96□□□□□ -0.17
TPM4-213ENST00000591226 SRGAP3O43295 1099 aa13.96□□□□□ -0.18
TPM4-213ENST00000591226 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.18
TPM4-213ENST00000591226 OSBPL3Q9H4L5 887 aa13.96□□□□□ -0.18
TPM4-213ENST00000591226 TSHZ3Q63HK5 1081 aa13.95□□□□□ -0.18
TPM4-213ENST00000591226 C9orf78Q9NZ63 289 aaPredicted RBP13.95□□□□□ -0.18
TPM4-213ENST00000591226 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
TPM4-213ENST00000591226 PIP4K2AP48426 406 aaPredicted RBP13.95□□□□□ -0.18
TPM4-213ENST00000591226 XAGE3Q8WTP9 111 aa13.95□□□□□ -0.18
TPM4-213ENST00000591226 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
TPM4-213ENST00000591226 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
TPM4-213ENST00000591226 LINS1Q8NG48 757 aa13.94□□□□□ -0.18
TPM4-213ENST00000591226 RIC3Q7Z5B4 369 aa13.94□□□□□ -0.18
TPM4-213ENST00000591226 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
TPM4-213ENST00000591226 MX1P20591 662 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 COPS6Q7L5N1 327 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 USP35Q9P2H5 1018 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 TUBGCP6Q96RT7 1819 aa13.93□□□□□ -0.18
TPM4-213ENST00000591226 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
TPM4-213ENST00000591226 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
TPM4-213ENST00000591226 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
TPM4-213ENST00000591226 SLKQ9H2G2 1235 aaPredicted RBP13.92□□□□□ -0.18
TPM4-213ENST00000591226 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
TPM4-213ENST00000591226 GRM8O00222 908 aa13.92□□□□□ -0.18
TPM4-213ENST00000591226 RAB11FIP3O75154 756 aa13.92□□□□□ -0.18
TPM4-213ENST00000591226 KIF2CQ99661 725 aa13.92□□□□□ -0.18
TPM4-213ENST00000591226 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
TPM4-213ENST00000591226 MTX1Q13505 466 aa13.91□□□□□ -0.18
TPM4-213ENST00000591226 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
TPM4-213ENST00000591226 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
TPM4-213ENST00000591226 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms