RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 DNAJC10Q8IXB1 793 aa20.59■□□□□ 0.89
GHDC-211ENST00000590520 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
GHDC-211ENST00000590520 COL15A1P39059 1388 aa20.59■□□□□ 0.89
GHDC-211ENST00000590520 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
GHDC-211ENST00000590520 TM4SF1P30408 202 aa20.58■□□□□ 0.89
GHDC-211ENST00000590520 USPL1Q5W0Q7 1092 aa20.58■□□□□ 0.89
GHDC-211ENST00000590520 KLRG1Q96E93 195 aa20.57■□□□□ 0.88
GHDC-211ENST00000590520 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
GHDC-211ENST00000590520 CYP19A1P11511 503 aaPredicted RBP20.54■□□□□ 0.88
GHDC-211ENST00000590520 RASSF7Q02833 373 aa20.54■□□□□ 0.88
GHDC-211ENST00000590520 RRAGCQ9HB90 399 aa20.54■□□□□ 0.88
GHDC-211ENST00000590520 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
GHDC-211ENST00000590520 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
GHDC-211ENST00000590520 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
GHDC-211ENST00000590520 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
GHDC-211ENST00000590520 HTRA3P83110 453 aa20.53■□□□□ 0.88
GHDC-211ENST00000590520 NFIXQ14938 502 aa20.53■□□□□ 0.88
GHDC-211ENST00000590520 JMYQ8N9B5 988 aa20.53■□□□□ 0.88
GHDC-211ENST00000590520 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
GHDC-211ENST00000590520 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
GHDC-211ENST00000590520 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
GHDC-211ENST00000590520 LMNB1P20700 586 aa20.51■□□□□ 0.87
GHDC-211ENST00000590520 SLC39A6Q13433 755 aa20.51■□□□□ 0.87
GHDC-211ENST00000590520 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
GHDC-211ENST00000590520 AMER1Q5JTC6 1135 aaPredicted RBP20.5■□□□□ 0.87
GHDC-211ENST00000590520 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
GHDC-211ENST00000590520 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
GHDC-211ENST00000590520 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
GHDC-211ENST00000590520 SERPINB2P05120 415 aa20.49■□□□□ 0.87
GHDC-211ENST00000590520 HMOX1P09601 288 aa20.49■□□□□ 0.87
GHDC-211ENST00000590520 BCL2L12Q9HB09 334 aa20.49■□□□□ 0.87
GHDC-211ENST00000590520 COL11A2P13942 1736 aaPredicted RBP20.48■□□□□ 0.87
GHDC-211ENST00000590520 TTLL6Q8N841 843 aa20.48■□□□□ 0.87
GHDC-211ENST00000590520 DICER1Q9UPY3 1922 aaKnown RBP20.48■□□□□ 0.87
GHDC-211ENST00000590520 SIPA1L3O60292 1781 aaPredicted RBP20.48■□□□□ 0.87
GHDC-211ENST00000590520 C2CD5Q86YS7 1000 aa20.47■□□□□ 0.87
GHDC-211ENST00000590520 GLTPD2A6NH11 291 aa20.46■□□□□ 0.87
GHDC-211ENST00000590520 MTHFSDQ2M296 383 aaKnown RBP20.46■□□□□ 0.87
GHDC-211ENST00000590520 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
GHDC-211ENST00000590520 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
GHDC-211ENST00000590520 A0A087WZG4 1122 aa20.44■□□□□ 0.86
GHDC-211ENST00000590520 H0YIN7 160 aa20.44■□□□□ 0.86
GHDC-211ENST00000590520 NFKBIEO00221 500 aa20.44■□□□□ 0.86
GHDC-211ENST00000590520 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
GHDC-211ENST00000590520 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
GHDC-211ENST00000590520 PRELPP51888 382 aa20.44■□□□□ 0.86
GHDC-211ENST00000590520 DIAPH1O60610 1272 aaKnown RBP20.43■□□□□ 0.86
GHDC-211ENST00000590520 STARD3NLO95772 234 aa20.43■□□□□ 0.86
GHDC-211ENST00000590520 BCORQ6W2J9 1755 aa20.43■□□□□ 0.86
GHDC-211ENST00000590520 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
GHDC-211ENST00000590520 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
GHDC-211ENST00000590520 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
GHDC-211ENST00000590520 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
GHDC-211ENST00000590520 COL13A1Q5TAT6 717 aaPredicted RBP20.42■□□□□ 0.86
GHDC-211ENST00000590520 PDZRN3Q9UPQ7 1066 aa20.42■□□□□ 0.86
GHDC-211ENST00000590520 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
GHDC-211ENST00000590520 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
GHDC-211ENST00000590520 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
GHDC-211ENST00000590520 TBC1D9BQ66K14 1250 aa20.39■□□□□ 0.85
GHDC-211ENST00000590520 PDE6BP35913 854 aa20.38■□□□□ 0.85
GHDC-211ENST00000590520 TEFQ10587 303 aa20.38■□□□□ 0.85
GHDC-211ENST00000590520 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
GHDC-211ENST00000590520 BRIP1Q9BX63 1249 aa20.38■□□□□ 0.85
GHDC-211ENST00000590520 PRR5LQ6MZQ0 368 aa20.37■□□□□ 0.85
GHDC-211ENST00000590520 ZNF790Q6PG37 636 aa20.37■□□□□ 0.85
GHDC-211ENST00000590520 TNS4Q8IZW8 715 aa20.37■□□□□ 0.85
GHDC-211ENST00000590520 ZNF622Q969S3 477 aaKnown RBP eCLIP20.37■□□□□ 0.85
GHDC-211ENST00000590520 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
GHDC-211ENST00000590520 TEX13AQ9BXU3 409 aaPredicted RBP20.37■□□□□ 0.85
GHDC-211ENST00000590520 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
GHDC-211ENST00000590520 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
GHDC-211ENST00000590520 DPY19L2Q6NUT2 758 aa20.36■□□□□ 0.85
GHDC-211ENST00000590520 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
GHDC-211ENST00000590520 SLX4Q8IY92 1834 aa20.36■□□□□ 0.85
GHDC-211ENST00000590520 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
GHDC-211ENST00000590520 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
GHDC-211ENST00000590520 C21orf2O43822 256 aa20.35■□□□□ 0.85
GHDC-211ENST00000590520 HSPA1AP0DMV8 641 aaKnown RBP20.35■□□□□ 0.85
GHDC-211ENST00000590520 HSPA1BP0DMV9 641 aaKnown RBP20.35■□□□□ 0.85
GHDC-211ENST00000590520 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
GHDC-211ENST00000590520 CNBD1Q8NA66 436 aa20.34■□□□□ 0.85
GHDC-211ENST00000590520 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
GHDC-211ENST00000590520 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
GHDC-211ENST00000590520 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
GHDC-211ENST00000590520 POTECB2RU33 542 aa20.33■□□□□ 0.85
GHDC-211ENST00000590520 PER1O15534 1290 aaPredicted RBP20.33■□□□□ 0.85
GHDC-211ENST00000590520 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
GHDC-211ENST00000590520 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
GHDC-211ENST00000590520 ZNF219Q9P2Y4 722 aaPredicted RBP20.33■□□□□ 0.85
GHDC-211ENST00000590520 CEMIPQ8WUJ3 1361 aa20.33■□□□□ 0.84
GHDC-211ENST00000590520 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
GHDC-211ENST00000590520 NPHP1O15259 732 aa20.32■□□□□ 0.84
GHDC-211ENST00000590520 ST5P78524 1137 aa20.32■□□□□ 0.84
GHDC-211ENST00000590520 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
GHDC-211ENST00000590520 IL17REQ8NFR9 667 aa20.32■□□□□ 0.84
GHDC-211ENST00000590520 CAPN15O75808 1086 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 STYK1Q6J9G0 422 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms