RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FUCA2Q9BTY2 467 aa18.08■□□□□ 0.48
CIRBP-228ENST00000590347 EPC1Q9H2F5 836 aa18.08■□□□□ 0.48
CIRBP-228ENST00000590347 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-228ENST00000590347 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-228ENST00000590347 CYP2C19P33261 490 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 GPATCH11Q8N954 259 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 PLEKHF1Q96S99 279 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 IL25Q9H293 177 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 UBE2HP62256 183 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 VAMP4O75379 141 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 SEC31AO94979 1220 aaKnown RBP18.07■□□□□ 0.48
CIRBP-228ENST00000590347 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-228ENST00000590347 TEX2Q8IWB9 1127 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
CIRBP-228ENST00000590347 LIG1P18858 919 aa18.06■□□□□ 0.48
CIRBP-228ENST00000590347 SYT1P21579 422 aa18.06■□□□□ 0.48
CIRBP-228ENST00000590347 CLIP2Q9UDT6 1046 aa18.06■□□□□ 0.48
CIRBP-228ENST00000590347 SOX12O15370 315 aa18.06■□□□□ 0.48
CIRBP-228ENST00000590347 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
CIRBP-228ENST00000590347 NEXMIFQ5QGS0 1516 aa18.06■□□□□ 0.48
CIRBP-228ENST00000590347 CCDC192P0DO97 292 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 CBX8Q9HC52 389 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 SLC20A2Q08357 652 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 CUL4AQ13619 759 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 C8orf58Q8NAV2 365 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 PTPN14Q15678 1187 aa18.05■□□□□ 0.48
CIRBP-228ENST00000590347 TYRO3Q06418 890 aa18.04■□□□□ 0.48
CIRBP-228ENST00000590347 CCDC34Q96HJ3 373 aa18.04■□□□□ 0.48
CIRBP-228ENST00000590347 DNAJC25Q9H1X3 360 aa18.04■□□□□ 0.48
CIRBP-228ENST00000590347 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
CIRBP-228ENST00000590347 PPLO60437 1756 aa18.04■□□□□ 0.48
CIRBP-228ENST00000590347 ZSCAN22P10073 491 aaPredicted RBP18.04■□□□□ 0.48
CIRBP-228ENST00000590347 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
CIRBP-228ENST00000590347 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 GTF2A1P52655 376 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-228ENST00000590347 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 SMARCE1Q969G3 411 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-228ENST00000590347 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
CIRBP-228ENST00000590347 PIK3C2BO00750 1634 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 ERBB3P21860 1342 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 RPAP1Q9BWH6 1393 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-228ENST00000590347 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 STX6O43752 255 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 SART3Q15020 963 aaKnown RBP18.03■□□□□ 0.48
CIRBP-228ENST00000590347 SKIDA1Q1XH10 827 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 MEIS3Q99687 375 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 PAXBP1Q9Y5B6 917 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 LRRFIP2Q9Y608 721 aaKnown RBP18.03■□□□□ 0.48
CIRBP-228ENST00000590347 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 LARGE1O95461 756 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
CIRBP-228ENST00000590347 GLI2P10070 1586 aa18.02■□□□□ 0.48
CIRBP-228ENST00000590347 CLCN6P51797 869 aa18.02■□□□□ 0.48
CIRBP-228ENST00000590347 FAM200AQ8TCP9 573 aa18.02■□□□□ 0.48
CIRBP-228ENST00000590347 RASSF4Q9H2L5 321 aa18.02■□□□□ 0.48
CIRBP-228ENST00000590347 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-228ENST00000590347 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.47
CIRBP-228ENST00000590347 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.47
CIRBP-228ENST00000590347 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
CIRBP-228ENST00000590347 PLA2G4AP47712 749 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 ZNF75DP51815 510 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 POLKQ9UBT6 870 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 TWISTNBQ3B726 338 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-228ENST00000590347 ALDH1L2Q3SY69 923 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 DRC1Q96MC2 740 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 SLC26A8Q96RN1 970 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 ZRANB1Q9UGI0 708 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
CIRBP-228ENST00000590347 MYO5BQ9ULV0 1848 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 FHOD1Q9Y613 1164 aa18.01■□□□□ 0.47
CIRBP-228ENST00000590347 MYO1CO00159 1063 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 FYB1O15117 783 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 F13A1P00488 732 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 TPM3P06753 285 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 SKILP12757 684 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 ARHGAP29Q52LW3 1261 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 KIAA1210Q9ULL0 1709 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 TULP4Q9NRJ4 1543 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 PNMA6AP0CW24 399 aaPredicted RBP18■□□□□ 0.47
CIRBP-228ENST00000590347 ERCC4Q92889 916 aaPredicted RBP18■□□□□ 0.47
CIRBP-228ENST00000590347 DACT1Q9NYF0 836 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
CIRBP-228ENST00000590347 APPP05067 770 aa17.99■□□□□ 0.47
CIRBP-228ENST00000590347 PDE1AP54750 535 aa17.99■□□□□ 0.47
CIRBP-228ENST00000590347 E2F4Q16254 413 aa17.99■□□□□ 0.47
CIRBP-228ENST00000590347 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
CIRBP-228ENST00000590347 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.99■□□□□ 0.47
CIRBP-228ENST00000590347 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
CIRBP-228ENST00000590347 MCCP23508 829 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 MAP3K11Q16584 847 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms