RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 ANAPC15P60006 121 aa25.37■■□□□ 1.65
ZNF554-203ENST00000590116 FOXD4L6Q3SYB3 417 aaPredicted RBP25.37■■□□□ 1.65
ZNF554-203ENST00000590116 NBPF6Q5VWK0 638 aa25.37■■□□□ 1.65
ZNF554-203ENST00000590116 FOXD4L3Q6VB84 417 aaPredicted RBP25.37■■□□□ 1.65
ZNF554-203ENST00000590116 NBPF4Q96M43 638 aa25.37■■□□□ 1.65
ZNF554-203ENST00000590116 FER1L4A9Z1Z3 1794 aa25.36■■□□□ 1.65
ZNF554-203ENST00000590116 PPP1R9BQ96SB3 815 aa25.36■■□□□ 1.65
ZNF554-203ENST00000590116 SRGAP3O43295 1099 aa25.35■■□□□ 1.65
ZNF554-203ENST00000590116 TMEM63CQ9P1W3 806 aa25.35■■□□□ 1.65
ZNF554-203ENST00000590116 AOX1Q06278 1338 aa25.34■■□□□ 1.65
ZNF554-203ENST00000590116 CUL4AQ13619 759 aa25.34■■□□□ 1.65
ZNF554-203ENST00000590116 EIF4A1P60842 406 aaKnown RBP25.33■■□□□ 1.65
ZNF554-203ENST00000590116 RHPN1Q8TCX5 695 aa25.33■■□□□ 1.65
ZNF554-203ENST00000590116 LRRC59Q96AG4 307 aaKnown RBP25.33■■□□□ 1.65
ZNF554-203ENST00000590116 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.64
ZNF554-203ENST00000590116 PI4KAP2A4QPH2 592 aa25.32■■□□□ 1.64
ZNF554-203ENST00000590116 PI4KAP1Q8N8J0 262 aa25.32■■□□□ 1.64
ZNF554-203ENST00000590116 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
ZNF554-203ENST00000590116 CEMIPQ8WUJ3 1361 aa25.32■■□□□ 1.64
ZNF554-203ENST00000590116 PI4K2BQ8TCG2 481 aa25.32■■□□□ 1.64
ZNF554-203ENST00000590116 PHF8Q9UPP1 1060 aa25.32■■□□□ 1.64
ZNF554-203ENST00000590116 SYCE3A1L190 88 aa25.31■■□□□ 1.64
ZNF554-203ENST00000590116 RAB11FIP3O75154 756 aa25.31■■□□□ 1.64
ZNF554-203ENST00000590116 BRD1O95696 1058 aa25.31■■□□□ 1.64
ZNF554-203ENST00000590116 POLA2Q14181 598 aa25.31■■□□□ 1.64
ZNF554-203ENST00000590116 IP6K1Q92551 441 aa25.3■■□□□ 1.64
ZNF554-203ENST00000590116 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
ZNF554-203ENST00000590116 INTS4Q96HW7 963 aaKnown RBP25.29■■□□□ 1.64
ZNF554-203ENST00000590116 BEND3Q5T5X7 828 aa25.29■■□□□ 1.64
ZNF554-203ENST00000590116 DNAAF4Q8WXU2 420 aa25.29■■□□□ 1.64
ZNF554-203ENST00000590116 LARP6Q9BRS8 491 aaKnown RBP25.29■■□□□ 1.64
ZNF554-203ENST00000590116 GDPD2Q9HCC8 539 aa25.29■■□□□ 1.64
ZNF554-203ENST00000590116 HSPA4P34932 840 aa25.27■■□□□ 1.64
ZNF554-203ENST00000590116 KIF1BPQ96EK5 621 aa25.27■■□□□ 1.64
ZNF554-203ENST00000590116 IL17RAQ96F46 866 aa25.27■■□□□ 1.64
ZNF554-203ENST00000590116 MED1Q15648 1581 aaPredicted RBP25.27■■□□□ 1.64
ZNF554-203ENST00000590116 NFAT5O94916 1531 aa25.26■■□□□ 1.64
ZNF554-203ENST00000590116 KDM3BQ7LBC6 1761 aa25.26■■□□□ 1.63
ZNF554-203ENST00000590116 ZNF530Q6P9A1 599 aaPredicted RBP25.26■■□□□ 1.63
ZNF554-203ENST00000590116 ADCY9O60503 1353 aa25.26■■□□□ 1.63
ZNF554-203ENST00000590116 BTBD11A6QL63 1104 aa25.25■■□□□ 1.63
ZNF554-203ENST00000590116 DTNBO60941 627 aa25.25■■□□□ 1.63
ZNF554-203ENST00000590116 XPCQ01831 940 aaPredicted RBP25.25■■□□□ 1.63
ZNF554-203ENST00000590116 TEFQ10587 303 aa25.25■■□□□ 1.63
ZNF554-203ENST00000590116 CWC27Q6UX04 472 aaKnown RBP25.25■■□□□ 1.63
ZNF554-203ENST00000590116 SPG7Q9UQ90 795 aa25.25■■□□□ 1.63
ZNF554-203ENST00000590116 SGSM2O43147 1006 aa25.24■■□□□ 1.63
ZNF554-203ENST00000590116 ZSCAN30Q86W11 494 aa25.24■■□□□ 1.63
ZNF554-203ENST00000590116 MBD3O95983 291 aa25.24■■□□□ 1.63
ZNF554-203ENST00000590116 HOXB7P09629 217 aa25.24■■□□□ 1.63
ZNF554-203ENST00000590116 OS9Q13438 667 aaPredicted RBP25.24■■□□□ 1.63
ZNF554-203ENST00000590116 ESCO1Q5FWF5 840 aa25.24■■□□□ 1.63
ZNF554-203ENST00000590116 RAD50Q92878 1312 aa25.24■■□□□ 1.63
ZNF554-203ENST00000590116 PROSER3Q2NL68 480 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 LRSAM1Q6UWE0 723 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 RASEFQ8IZ41 740 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 RNF214Q8ND24 703 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 SNX14Q9Y5W7 946 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 PXDNQ92626 1479 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 PRAMEF22A3QJZ6 481 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 EPB41L2O43491 1005 aaKnown RBP25.23■■□□□ 1.63
ZNF554-203ENST00000590116 CPA1P15085 419 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 TPRNQ4KMQ1 711 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 CNTROBQ8N137 903 aa25.23■■□□□ 1.63
ZNF554-203ENST00000590116 PSME1Q06323 249 aa25.22■■□□□ 1.63
ZNF554-203ENST00000590116 GADD45BO75293 160 aaPredicted RBP25.22■■□□□ 1.63
ZNF554-203ENST00000590116 LSG1Q9H089 658 aaKnown RBP25.22■■□□□ 1.63
ZNF554-203ENST00000590116 PA2G4Q9UQ80 394 aaKnown RBP25.21■■□□□ 1.63
ZNF554-203ENST00000590116 TCHHQ07283 1943 aa25.2■■□□□ 1.63
ZNF554-203ENST00000590116 AKAP4Q5JQC9 854 aa25.2■■□□□ 1.62
ZNF554-203ENST00000590116 RPAP1Q9BWH6 1393 aaPredicted RBP25.19■■□□□ 1.62
ZNF554-203ENST00000590116 CWF19L2Q2TBE0 894 aaKnown RBP25.19■■□□□ 1.62
ZNF554-203ENST00000590116 HSP90AB4PQ58FF6 505 aa25.19■■□□□ 1.62
ZNF554-203ENST00000590116 CHMP4AQ9BY43 222 aa25.19■■□□□ 1.62
ZNF554-203ENST00000590116 MAP3K2Q9Y2U5 619 aa25.19■■□□□ 1.62
ZNF554-203ENST00000590116 MSNP26038 577 aaKnown RBP25.19■■□□□ 1.62
ZNF554-203ENST00000590116 AK2P54819 239 aa25.18■■□□□ 1.62
ZNF554-203ENST00000590116 LMO7Q8WWI1 1683 aa25.18■■□□□ 1.62
ZNF554-203ENST00000590116 PRKCSHP14314 528 aaPredicted RBP25.18■■□□□ 1.62
ZNF554-203ENST00000590116 KIAA1211Q6ZU35 1233 aa25.18■■□□□ 1.62
ZNF554-203ENST00000590116 PDLIM2Q96JY6 352 aa25.18■■□□□ 1.62
ZNF554-203ENST00000590116 WDR33Q9C0J8 1336 aaKnown RBP25.17■■□□□ 1.62
ZNF554-203ENST00000590116 PLEKHO1Q53GL0 409 aaPredicted RBP25.17■■□□□ 1.62
ZNF554-203ENST00000590116 KCNH5Q8NCM2 988 aa25.17■■□□□ 1.62
ZNF554-203ENST00000590116 DBF4Q9UBU7 674 aaPredicted RBP25.17■■□□□ 1.62
ZNF554-203ENST00000590116 TTC14Q96N46 770 aa25.17■■□□□ 1.62
ZNF554-203ENST00000590116 LMOD2Q6P5Q4 547 aa25.16■■□□□ 1.62
ZNF554-203ENST00000590116 RUFY3Q7L099 469 aa25.16■■□□□ 1.62
ZNF554-203ENST00000590116 C9orf78Q9NZ63 289 aaPredicted RBP25.16■■□□□ 1.62
ZNF554-203ENST00000590116 USP48Q86UV5 1035 aa25.15■■□□□ 1.62
ZNF554-203ENST00000590116 RNMTO43148 476 aaKnown RBP25.15■■□□□ 1.62
ZNF554-203ENST00000590116 DDX54Q8TDD1 881 aaKnown RBP25.15■■□□□ 1.62
ZNF554-203ENST00000590116 GLRX3O76003 335 aaKnown RBP25.14■■□□□ 1.62
ZNF554-203ENST00000590116 LARGE1O95461 756 aa25.14■■□□□ 1.62
ZNF554-203ENST00000590116 PTH1RQ03431 593 aa25.14■■□□□ 1.62
ZNF554-203ENST00000590116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.14■■□□□ 1.62
ZNF554-203ENST00000590116 CHD2O14647 1828 aaKnown RBP25.14■■□□□ 1.62
ZNF554-203ENST00000590116 CRYBG1Q9Y4K1 1723 aa25.14■■□□□ 1.62
ZNF554-203ENST00000590116 CASTP20810 708 aaKnown RBP25.14■■□□□ 1.61
ZNF554-203ENST00000590116 C1orf141Q5JVX7 400 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms