RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 POLRMTO00411 1230 aaKnown RBP14.12□□□□□ -0.15
RETREG3-209ENST00000590035 KIF3CO14782 793 aa14.12□□□□□ -0.15
RETREG3-209ENST00000590035 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
RETREG3-209ENST00000590035 GPBP1L1Q9HC44 474 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-209ENST00000590035 AFDNP55196 1824 aaKnown RBP14.11□□□□□ -0.15
RETREG3-209ENST00000590035 SLC39A6Q13433 755 aa14.11□□□□□ -0.15
RETREG3-209ENST00000590035 BCL2L12Q9HB09 334 aa14.11□□□□□ -0.15
RETREG3-209ENST00000590035 PARP3Q9Y6F1 533 aa14.11□□□□□ -0.15
RETREG3-209ENST00000590035 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-209ENST00000590035 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
RETREG3-209ENST00000590035 FOXD4L1Q9NU39 408 aa14.1□□□□□ -0.15
RETREG3-209ENST00000590035 COL15A1P39059 1388 aa14.09□□□□□ -0.15
RETREG3-209ENST00000590035 DLEC1Q9Y238 1755 aa14.09□□□□□ -0.15
RETREG3-209ENST00000590035 IL17REQ8NFR9 667 aa14.09□□□□□ -0.15
RETREG3-209ENST00000590035 NARFQ9UHQ1 456 aa14.09□□□□□ -0.15
RETREG3-209ENST00000590035 ZBTB1Q9Y2K1 713 aa14.09□□□□□ -0.15
RETREG3-209ENST00000590035 USPL1Q5W0Q7 1092 aa14.08□□□□□ -0.16
RETREG3-209ENST00000590035 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
RETREG3-209ENST00000590035 SCN7AQ01118 1682 aa14.07□□□□□ -0.16
RETREG3-209ENST00000590035 SBF1O95248 1867 aa14.07□□□□□ -0.16
RETREG3-209ENST00000590035 ZBTB22O15209 634 aa14.06□□□□□ -0.16
RETREG3-209ENST00000590035 EIF5P55010 431 aaKnown RBP14.06□□□□□ -0.16
RETREG3-209ENST00000590035 NFIXQ14938 502 aa14.06□□□□□ -0.16
RETREG3-209ENST00000590035 PIM2Q9P1W9 311 aa14.06□□□□□ -0.16
RETREG3-209ENST00000590035 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
RETREG3-209ENST00000590035 FCHSD2O94868 740 aa14.05□□□□□ -0.16
RETREG3-209ENST00000590035 HSPA6P17066 643 aa14.05□□□□□ -0.16
RETREG3-209ENST00000590035 CHRNA5P30532 468 aa14.05□□□□□ -0.16
RETREG3-209ENST00000590035 C1QBPQ07021 282 aaKnown RBP14.05□□□□□ -0.16
RETREG3-209ENST00000590035 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
RETREG3-209ENST00000590035 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-209ENST00000590035 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-209ENST00000590035 RSPH6AQ9H0K4 717 aa14.05□□□□□ -0.16
RETREG3-209ENST00000590035 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
RETREG3-209ENST00000590035 ZPR1O75312 459 aa14.04□□□□□ -0.16
RETREG3-209ENST00000590035 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
RETREG3-209ENST00000590035 PHACTR3Q96KR7 559 aa14.04□□□□□ -0.16
RETREG3-209ENST00000590035 CARMIL3Q8ND23 1372 aa14.04□□□□□ -0.16
RETREG3-209ENST00000590035 ANKRD31Q8N7Z5 1873 aa14.04□□□□□ -0.16
RETREG3-209ENST00000590035 DALRD3Q5D0E6 543 aaKnown RBP14.03□□□□□ -0.16
RETREG3-209ENST00000590035 ARHGAP27Q6ZUM4 889 aa14.03□□□□□ -0.16
RETREG3-209ENST00000590035 BCORQ6W2J9 1755 aa14.02□□□□□ -0.16
RETREG3-209ENST00000590035 U2SURPO15042 1029 aaKnown RBP14.01□□□□□ -0.17
RETREG3-209ENST00000590035 STARD3NLO95772 234 aa14.01□□□□□ -0.17
RETREG3-209ENST00000590035 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
RETREG3-209ENST00000590035 SERPINB2P05120 415 aa14□□□□□ -0.17
RETREG3-209ENST00000590035 PPP2R1AP30153 589 aa14□□□□□ -0.17
RETREG3-209ENST00000590035 PRKAR2BP31323 418 aa14□□□□□ -0.17
RETREG3-209ENST00000590035 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
RETREG3-209ENST00000590035 PRELPP51888 382 aa14□□□□□ -0.17
RETREG3-209ENST00000590035 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
RETREG3-209ENST00000590035 TEX13AQ9BXU3 409 aaPredicted RBP14□□□□□ -0.17
RETREG3-209ENST00000590035 NMRK2Q9NPI5 230 aa14□□□□□ -0.17
RETREG3-209ENST00000590035 COL11A2P13942 1736 aaPredicted RBP14□□□□□ -0.17
RETREG3-209ENST00000590035 TNRC6CQ9HCJ0 1690 aaKnown RBP13.99□□□□□ -0.17
RETREG3-209ENST00000590035 KCNQ3O43525 872 aa13.99□□□□□ -0.17
RETREG3-209ENST00000590035 TOMM70O94826 608 aa13.99□□□□□ -0.17
RETREG3-209ENST00000590035 CANXP27824 592 aaKnown RBP13.99□□□□□ -0.17
RETREG3-209ENST00000590035 TEFQ10587 303 aa13.99□□□□□ -0.17
RETREG3-209ENST00000590035 ZC3H4Q9UPT8 1303 aaKnown RBP13.98□□□□□ -0.17
RETREG3-209ENST00000590035 A0A087WZG4 1122 aa13.98□□□□□ -0.17
RETREG3-209ENST00000590035 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
RETREG3-209ENST00000590035 TBC1D9BQ66K14 1250 aa13.98□□□□□ -0.17
RETREG3-209ENST00000590035 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
RETREG3-209ENST00000590035 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
RETREG3-209ENST00000590035 FER1L6Q2WGJ9 1857 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 NFKBIEO00221 500 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
RETREG3-209ENST00000590035 A1BGP04217 495 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 PRR5LQ6MZQ0 368 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 RNF181Q9P0P0 153 aa13.96□□□□□ -0.17
RETREG3-209ENST00000590035 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.18
RETREG3-209ENST00000590035 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
RETREG3-209ENST00000590035 RASSF7Q02833 373 aa13.95□□□□□ -0.18
RETREG3-209ENST00000590035 TTLL6Q8N841 843 aa13.95□□□□□ -0.18
RETREG3-209ENST00000590035 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
RETREG3-209ENST00000590035 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
RETREG3-209ENST00000590035 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
RETREG3-209ENST00000590035 WDR90Q96KV7 1748 aa13.95□□□□□ -0.18
RETREG3-209ENST00000590035 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 RGL2O15211 777 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 APLP1P51693 650 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 CCDC88AQ3V6T2 1871 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 C2CD5Q86YS7 1000 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 PDZRN3Q9UPQ7 1066 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 TBC1D2BQ9UPU7 963 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
RETREG3-209ENST00000590035 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
RETREG3-209ENST00000590035 PCNTO95613 3336 aa13.93□□□□□ -0.18
RETREG3-209ENST00000590035 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-209ENST00000590035 LMNB1P20700 586 aa13.93□□□□□ -0.18
RETREG3-209ENST00000590035 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
RETREG3-209ENST00000590035 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-209ENST00000590035 MCM10Q7L590 875 aa13.93□□□□□ -0.18
RETREG3-209ENST00000590035 DLG5Q8TDM6 1919 aa13.93□□□□□ -0.18
RETREG3-209ENST00000590035 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms