RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PTCD1O75127 700 aaKnown RBP22.17■■□□□ 1.14
CXXC1-212ENST00000589940 ITPRIPQ8IWB1 547 aa22.17■■□□□ 1.14
CXXC1-212ENST00000589940 SEPT12Q8IYM1 358 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 ACSBG1Q96GR2 724 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 AAMPQ13685 434 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 B4GALNT3Q6L9W6 998 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 CCDC136Q96JN2 1154 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 DDX19BQ9UMR2 479 aa22.16■■□□□ 1.14
CXXC1-212ENST00000589940 USP16Q9Y5T5 823 aa22.15■■□□□ 1.14
CXXC1-212ENST00000589940 FKBP5Q13451 457 aaPredicted RBP22.15■■□□□ 1.14
CXXC1-212ENST00000589940 DDX21Q9NR30 783 aaKnown RBP eCLIP22.15■■□□□ 1.14
CXXC1-212ENST00000589940 LAMB4A4D0S4 1761 aa22.14■■□□□ 1.14
CXXC1-212ENST00000589940 VSIG10Q8N0Z9 540 aa22.14■■□□□ 1.14
CXXC1-212ENST00000589940 PHAXQ9H814 394 aaKnown RBP22.14■■□□□ 1.14
CXXC1-212ENST00000589940 HYPKQ9NX55 129 aa22.14■■□□□ 1.13
CXXC1-212ENST00000589940 ANXA1P04083 346 aa22.13■■□□□ 1.13
CXXC1-212ENST00000589940 PDIA6Q15084 440 aa22.13■■□□□ 1.13
CXXC1-212ENST00000589940 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
CXXC1-212ENST00000589940 PROSER3Q2NL68 480 aa22.12■■□□□ 1.13
CXXC1-212ENST00000589940 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
CXXC1-212ENST00000589940 RBM6P78332 1123 aaKnown RBP22.11■■□□□ 1.13
CXXC1-212ENST00000589940 RBM42Q9BTD8 480 aaKnown RBP22.11■■□□□ 1.13
CXXC1-212ENST00000589940 TEX13AQ9BXU3 409 aaPredicted RBP22.11■■□□□ 1.13
CXXC1-212ENST00000589940 ERBB4Q15303 1308 aa22.11■■□□□ 1.13
CXXC1-212ENST00000589940 KCNQ2O43526 872 aa22.1■■□□□ 1.13
CXXC1-212ENST00000589940 F6X3S4 739 aa22.1■■□□□ 1.13
CXXC1-212ENST00000589940 CHMP4BQ9H444 224 aaKnown RBP22.09■■□□□ 1.13
CXXC1-212ENST00000589940 PXDNLA1KZ92 1463 aa22.08■■□□□ 1.12
CXXC1-212ENST00000589940 MYL6BP14649 208 aa22.07■■□□□ 1.12
CXXC1-212ENST00000589940 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
CXXC1-212ENST00000589940 FAM182BQ5T319 152 aa22.07■■□□□ 1.12
CXXC1-212ENST00000589940 ZBTB7BO15156 539 aaPredicted RBP22.07■■□□□ 1.12
CXXC1-212ENST00000589940 SLC4A10Q6U841 1118 aa22.07■■□□□ 1.12
CXXC1-212ENST00000589940 LRP10Q7Z4F1 713 aa22.07■■□□□ 1.12
CXXC1-212ENST00000589940 SMARCC1Q92922 1105 aaPredicted RBP22.07■■□□□ 1.12
CXXC1-212ENST00000589940 SLC4A9Q96Q91 983 aa22.07■■□□□ 1.12
CXXC1-212ENST00000589940 ZBTB40Q9NUA8 1239 aa22.07■■□□□ 1.12
CXXC1-212ENST00000589940 DNAJC10Q8IXB1 793 aa22.06■■□□□ 1.12
CXXC1-212ENST00000589940 NHSQ6T4R5 1651 aa22.05■■□□□ 1.12
CXXC1-212ENST00000589940 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
CXXC1-212ENST00000589940 PI4KAP2A4QPH2 592 aa22.05■■□□□ 1.12
CXXC1-212ENST00000589940 STARD3NLO95772 234 aa22.05■■□□□ 1.12
CXXC1-212ENST00000589940 PI4KAP1Q8N8J0 262 aa22.05■■□□□ 1.12
CXXC1-212ENST00000589940 ADCY9O60503 1353 aa22.05■■□□□ 1.12
CXXC1-212ENST00000589940 NBPF26B4DH59 902 aa22.04■■□□□ 1.12
CXXC1-212ENST00000589940 DDX58O95786 925 aaKnown RBP22.04■■□□□ 1.12
CXXC1-212ENST00000589940 NBPF14Q5TI25 921 aa22.04■■□□□ 1.12
CXXC1-212ENST00000589940 NBPF10Q6P3W6 841 aaKnown RBP22.04■■□□□ 1.12
CXXC1-212ENST00000589940 NBPF15Q8N660 670 aa22.04■■□□□ 1.12
CXXC1-212ENST00000589940 PIP4K2AP48426 406 aaPredicted RBP22.04■■□□□ 1.12
CXXC1-212ENST00000589940 KRT27Q7Z3Y8 459 aa22.04■■□□□ 1.12
CXXC1-212ENST00000589940 A1BGP04217 495 aa22.03■■□□□ 1.12
CXXC1-212ENST00000589940 KSR2Q6VAB6 950 aa22.03■■□□□ 1.12
CXXC1-212ENST00000589940 XAGE3Q8WTP9 111 aa22.03■■□□□ 1.12
CXXC1-212ENST00000589940 DNAAF4Q8WXU2 420 aa22.03■■□□□ 1.12
CXXC1-212ENST00000589940 AIMP1Q12904 312 aaKnown RBP22.03■■□□□ 1.12
CXXC1-212ENST00000589940 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
CXXC1-212ENST00000589940 SIK1P57059 783 aa22.02■■□□□ 1.12
CXXC1-212ENST00000589940 COPS6Q7L5N1 327 aa22.02■■□□□ 1.12
CXXC1-212ENST00000589940 RXRBP28702 533 aa22.02■■□□□ 1.11
CXXC1-212ENST00000589940 PCDHB15Q9Y5E8 787 aa22.02■■□□□ 1.11
CXXC1-212ENST00000589940 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
CXXC1-212ENST00000589940 TJP1Q07157 1748 aa22.01■■□□□ 1.11
CXXC1-212ENST00000589940 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
CXXC1-212ENST00000589940 CYP19A1P11511 503 aaPredicted RBP22.01■■□□□ 1.11
CXXC1-212ENST00000589940 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
CXXC1-212ENST00000589940 RGS17Q9UGC6 210 aaPredicted RBP22.01■■□□□ 1.11
CXXC1-212ENST00000589940 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
CXXC1-212ENST00000589940 ATP10DQ9P241 1426 aa22■■□□□ 1.11
CXXC1-212ENST00000589940 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
CXXC1-212ENST00000589940 FAM196AQ6ZSG2 479 aa22■■□□□ 1.11
CXXC1-212ENST00000589940 SBF2Q86WG5 1849 aa21.99■■□□□ 1.11
CXXC1-212ENST00000589940 ATP6V1AP38606 617 aa21.99■■□□□ 1.11
CXXC1-212ENST00000589940 BTAF1O14981 1849 aa21.99■■□□□ 1.11
CXXC1-212ENST00000589940 BEND3Q5T5X7 828 aa21.99■■□□□ 1.11
CXXC1-212ENST00000589940 SRCIN1Q9C0H9 1055 aa21.99■■□□□ 1.11
CXXC1-212ENST00000589940 RIC3Q7Z5B4 369 aa21.98■■□□□ 1.11
CXXC1-212ENST00000589940 EP400Q96L91 3159 aa21.98■■□□□ 1.11
CXXC1-212ENST00000589940 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
CXXC1-212ENST00000589940 ANKRD13DQ6ZTN6 518 aa21.98■■□□□ 1.11
CXXC1-212ENST00000589940 ZNF831Q5JPB2 1677 aa21.97■■□□□ 1.11
CXXC1-212ENST00000589940 MEIS3Q99687 375 aa21.97■■□□□ 1.11
CXXC1-212ENST00000589940 BCL11BQ9C0K0 894 aaPredicted RBP21.97■■□□□ 1.11
CXXC1-212ENST00000589940 CENPQQ7L2Z9 268 aaPredicted RBP21.96■■□□□ 1.11
CXXC1-212ENST00000589940 ITPK1Q13572 414 aa21.95■■□□□ 1.1
CXXC1-212ENST00000589940 POTEAQ6S8J7 498 aa21.95■■□□□ 1.1
CXXC1-212ENST00000589940 PLBD2Q8NHP8 589 aa21.95■■□□□ 1.1
CXXC1-212ENST00000589940 C1orf115Q9H7X2 142 aa21.95■■□□□ 1.1
CXXC1-212ENST00000589940 IGHDP01880 384 aa21.94■■□□□ 1.1
CXXC1-212ENST00000589940 ZBTB1Q9Y2K1 713 aa21.94■■□□□ 1.1
CXXC1-212ENST00000589940 ALDH1L1O75891 902 aa21.94■■□□□ 1.1
CXXC1-212ENST00000589940 GNAI3P08754 354 aa21.94■■□□□ 1.1
CXXC1-212ENST00000589940 TTLL7Q6ZT98 887 aa21.94■■□□□ 1.1
CXXC1-212ENST00000589940 LINS1Q8NG48 757 aa21.94■■□□□ 1.1
CXXC1-212ENST00000589940 METTL22Q9BUU2 404 aaPredicted RBP21.94■■□□□ 1.1
CXXC1-212ENST00000589940 RWDD1Q9H446 243 aaPredicted RBP21.94■■□□□ 1.1
CXXC1-212ENST00000589940 NEXNQ0ZGT2 675 aa21.92■■□□□ 1.1
CXXC1-212ENST00000589940 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
CXXC1-212ENST00000589940 USP44Q9H0E7 712 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms