RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 PXDNQ92626 1479 aa13.5□□□□□ -0.25
GFAP-216ENST00000589701 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 AIMP1Q12904 312 aaKnown RBP13.49□□□□□ -0.25
GFAP-216ENST00000589701 DCCP43146 1447 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 JCADQ9P266 1359 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 UBTFL1P0CB47 393 aaPredicted RBP13.49□□□□□ -0.25
GFAP-216ENST00000589701 PKP1Q13835 747 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 TNPO1Q92973 898 aaKnown RBP13.49□□□□□ -0.25
GFAP-216ENST00000589701 IL25Q9H293 177 aa13.49□□□□□ -0.25
GFAP-216ENST00000589701 USP26Q9BXU7 913 aa13.48□□□□□ -0.25
GFAP-216ENST00000589701 HMMRO75330 724 aa13.48□□□□□ -0.25
GFAP-216ENST00000589701 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
GFAP-216ENST00000589701 PPP1R42Q7Z4L9 355 aa13.48□□□□□ -0.25
GFAP-216ENST00000589701 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
GFAP-216ENST00000589701 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 ARHGEF25Q86VW2 580 aa13.47□□□□□ -0.25
GFAP-216ENST00000589701 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 LRRCC1Q9C099 1032 aa13.47□□□□□ -0.25
GFAP-216ENST00000589701 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 SURF6O75683 361 aaKnown RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 SSFA2P28290 1259 aa13.47□□□□□ -0.25
GFAP-216ENST00000589701 SECISBP2LQ93073 1101 aaKnown RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 COL16A1Q07092 1604 aaPredicted RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
GFAP-216ENST00000589701 K7ELQ4 463 aaPredicted RBP13.47□□□□□ -0.25
GFAP-216ENST00000589701 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
GFAP-216ENST00000589701 NLRP2Q9NX02 1062 aa13.47□□□□□ -0.25
GFAP-216ENST00000589701 NFAT5O94916 1531 aa13.46□□□□□ -0.25
GFAP-216ENST00000589701 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
GFAP-216ENST00000589701 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
GFAP-216ENST00000589701 TRAK2O60296 914 aa13.46□□□□□ -0.26
GFAP-216ENST00000589701 MX1P20591 662 aa13.46□□□□□ -0.26
GFAP-216ENST00000589701 ATP8B2P98198 1209 aa13.46□□□□□ -0.26
GFAP-216ENST00000589701 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.26
GFAP-216ENST00000589701 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.26
GFAP-216ENST00000589701 RGS17Q9UGC6 210 aaPredicted RBP13.46□□□□□ -0.26
GFAP-216ENST00000589701 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
GFAP-216ENST00000589701 DDIT3P35638 169 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 PANK2Q9BZ23 570 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 SRCIN1Q9C0H9 1055 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 GNAI3P08754 354 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 MYL6BP14649 208 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 SNX21Q969T3 373 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 ZNF830Q96NB3 372 aaPredicted RBP13.45□□□□□ -0.26
GFAP-216ENST00000589701 PALD1Q9ULE6 856 aa13.45□□□□□ -0.26
GFAP-216ENST00000589701 PA2G4Q9UQ80 394 aaKnown RBP13.45□□□□□ -0.26
GFAP-216ENST00000589701 FAM208AQ9UK61 1670 aaKnown RBP13.45□□□□□ -0.26
GFAP-216ENST00000589701 CEMIPQ8WUJ3 1361 aa13.44□□□□□ -0.26
GFAP-216ENST00000589701 RNMTO43148 476 aaKnown RBP13.44□□□□□ -0.26
GFAP-216ENST00000589701 HOMEZQ8IX15 550 aa13.44□□□□□ -0.26
GFAP-216ENST00000589701 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
GFAP-216ENST00000589701 SPATA31A6Q5VVP1 1343 aa13.44□□□□□ -0.26
GFAP-216ENST00000589701 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
GFAP-216ENST00000589701 MAP3K2Q9Y2U5 619 aa13.44□□□□□ -0.26
GFAP-216ENST00000589701 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
GFAP-216ENST00000589701 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
GFAP-216ENST00000589701 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
GFAP-216ENST00000589701 ANO2Q9NQ90 1003 aa13.43□□□□□ -0.26
GFAP-216ENST00000589701 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
GFAP-216ENST00000589701 DNAAF4Q8WXU2 420 aa13.43□□□□□ -0.26
GFAP-216ENST00000589701 UPF3BQ9BZI7 483 aaKnown RBP13.43□□□□□ -0.26
GFAP-216ENST00000589701 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
GFAP-216ENST00000589701 BEND3Q5T5X7 828 aa13.42□□□□□ -0.26
GFAP-216ENST00000589701 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
GFAP-216ENST00000589701 ADCY9O60503 1353 aa13.42□□□□□ -0.26
GFAP-216ENST00000589701 FOXD4L6Q3SYB3 417 aaPredicted RBP13.42□□□□□ -0.26
GFAP-216ENST00000589701 FOXD4L3Q6VB84 417 aaPredicted RBP13.42□□□□□ -0.26
GFAP-216ENST00000589701 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
GFAP-216ENST00000589701 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
GFAP-216ENST00000589701 VGLL3A8MV65 326 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
GFAP-216ENST00000589701 BRINP3Q76B58 766 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 MST1RQ04912 1400 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 ERC2O15083 957 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 NEK4P51957 841 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 CASC1Q6TDU7 716 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 USP54Q70EL1 1684 aa13.41□□□□□ -0.26
GFAP-216ENST00000589701 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
GFAP-216ENST00000589701 SIL1Q9H173 461 aa13.4□□□□□ -0.26
GFAP-216ENST00000589701 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
GFAP-216ENST00000589701 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
GFAP-216ENST00000589701 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
GFAP-216ENST00000589701 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
GFAP-216ENST00000589701 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
GFAP-216ENST00000589701 ERBB3P21860 1342 aa13.39□□□□□ -0.27
GFAP-216ENST00000589701 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
GFAP-216ENST00000589701 CHMLP26374 656 aa13.39□□□□□ -0.27
GFAP-216ENST00000589701 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
GFAP-216ENST00000589701 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
GFAP-216ENST00000589701 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
GFAP-216ENST00000589701 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
GFAP-216ENST00000589701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.38□□□□□ -0.27
GFAP-216ENST00000589701 SSH3Q8TE77 659 aa13.38□□□□□ -0.27
GFAP-216ENST00000589701 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
GFAP-216ENST00000589701 RABEP1Q15276 862 aa13.38□□□□□ -0.27
GFAP-216ENST00000589701 REC8O95072 547 aa13.37□□□□□ -0.27
GFAP-216ENST00000589701 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms