RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
MBD1-218ENST00000589541 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
MBD1-218ENST00000589541 HSPA6P17066 643 aa15.89■□□□□ 0.13
MBD1-218ENST00000589541 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
MBD1-218ENST00000589541 NFIXQ14938 502 aa15.89■□□□□ 0.13
MBD1-218ENST00000589541 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
MBD1-218ENST00000589541 GNAT3A8MTJ3 354 aa15.88■□□□□ 0.13
MBD1-218ENST00000589541 TEFQ10587 303 aa15.88■□□□□ 0.13
MBD1-218ENST00000589541 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
MBD1-218ENST00000589541 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
MBD1-218ENST00000589541 GAS2L2Q8NHY3 880 aa15.88■□□□□ 0.13
MBD1-218ENST00000589541 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
MBD1-218ENST00000589541 STARD3NLO95772 234 aa15.87■□□□□ 0.13
MBD1-218ENST00000589541 ZNF496Q96IT1 587 aaPredicted RBP15.87■□□□□ 0.13
MBD1-218ENST00000589541 BCL2L12Q9HB09 334 aa15.87■□□□□ 0.13
MBD1-218ENST00000589541 NMRK2Q9NPI5 230 aa15.86■□□□□ 0.13
MBD1-218ENST00000589541 VIRMAQ69YN4 1812 aaKnown RBP15.86■□□□□ 0.13
MBD1-218ENST00000589541 SERPINB2P05120 415 aa15.85■□□□□ 0.13
MBD1-218ENST00000589541 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
MBD1-218ENST00000589541 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
MBD1-218ENST00000589541 CFAP53Q96M91 514 aa15.85■□□□□ 0.13
MBD1-218ENST00000589541 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
MBD1-218ENST00000589541 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
MBD1-218ENST00000589541 EIF5P55010 431 aaKnown RBP15.84■□□□□ 0.13
MBD1-218ENST00000589541 BICDL1Q6ZP65 573 aa15.84■□□□□ 0.13
MBD1-218ENST00000589541 RNF181Q9P0P0 153 aa15.84■□□□□ 0.13
MBD1-218ENST00000589541 ZNF330Q9Y3S2 320 aaPredicted RBP15.84■□□□□ 0.13
MBD1-218ENST00000589541 ARFGEF1Q9Y6D6 1849 aa15.84■□□□□ 0.13
MBD1-218ENST00000589541 HEG1Q9ULI3 1381 aa15.84■□□□□ 0.13
MBD1-218ENST00000589541 A0A087WZG4 1122 aa15.82■□□□□ 0.12
MBD1-218ENST00000589541 TOMM70O94826 608 aa15.82■□□□□ 0.12
MBD1-218ENST00000589541 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
MBD1-218ENST00000589541 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
MBD1-218ENST00000589541 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
MBD1-218ENST00000589541 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
MBD1-218ENST00000589541 CARMIL3Q8ND23 1372 aa15.81■□□□□ 0.12
MBD1-218ENST00000589541 CEMIPQ8WUJ3 1361 aa15.81■□□□□ 0.12
MBD1-218ENST00000589541 TBC1D2BQ9UPU7 963 aa15.81■□□□□ 0.12
MBD1-218ENST00000589541 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
MBD1-218ENST00000589541 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
MBD1-218ENST00000589541 KCNQ3O43525 872 aa15.8■□□□□ 0.12
MBD1-218ENST00000589541 A1BGP04217 495 aa15.8■□□□□ 0.12
MBD1-218ENST00000589541 U2AF1L5P0DN76 240 aaPredicted RBP15.8■□□□□ 0.12
MBD1-218ENST00000589541 U2AF1Q01081 240 aaKnown RBP eCLIP15.8■□□□□ 0.12
MBD1-218ENST00000589541 TBC1D9BQ66K14 1250 aa15.8■□□□□ 0.12
MBD1-218ENST00000589541 AFDNP55196 1824 aaKnown RBP15.8■□□□□ 0.12
MBD1-218ENST00000589541 NRXN2Q9P2S2 1712 aa15.8■□□□□ 0.12
MBD1-218ENST00000589541 KDM2BQ8NHM5 1336 aa15.79■□□□□ 0.12
MBD1-218ENST00000589541 H0YIN7 160 aa15.79■□□□□ 0.12
MBD1-218ENST00000589541 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
MBD1-218ENST00000589541 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
MBD1-218ENST00000589541 RASSF7Q02833 373 aa15.79■□□□□ 0.12
MBD1-218ENST00000589541 C16orf71Q8IYS4 520 aaPredicted RBP15.79■□□□□ 0.12
MBD1-218ENST00000589541 TTLL6Q8N841 843 aa15.79■□□□□ 0.12
MBD1-218ENST00000589541 SIPA1L3O60292 1781 aaPredicted RBP15.79■□□□□ 0.12
MBD1-218ENST00000589541 APLP1P51693 650 aa15.78■□□□□ 0.12
MBD1-218ENST00000589541 MCM10Q7L590 875 aa15.78■□□□□ 0.12
MBD1-218ENST00000589541 NPM2Q86SE8 214 aaKnown RBP15.78■□□□□ 0.12
MBD1-218ENST00000589541 CCDC24Q8N4L8 307 aa15.77■□□□□ 0.12
MBD1-218ENST00000589541 RTF1Q92541 710 aaKnown RBP15.77■□□□□ 0.12
MBD1-218ENST00000589541 LMNB1P20700 586 aa15.76■□□□□ 0.11
MBD1-218ENST00000589541 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
MBD1-218ENST00000589541 RBM46Q8TBY0 533 aaKnown RBP15.76■□□□□ 0.11
MBD1-218ENST00000589541 RRAGCQ9HB90 399 aa15.76■□□□□ 0.11
MBD1-218ENST00000589541 PRAMEF22A3QJZ6 481 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 NPHP1O15259 732 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 CAMTA2O94983 1202 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 PRELPP51888 382 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 DCTN1Q14203 1278 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 PRR5LQ6MZQ0 368 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 ZNF622Q969S3 477 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■□□ 15.8
MBD1-218ENST00000589541 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 BRIP1Q9BX63 1249 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 USP16Q9Y5T5 823 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 SCN7AQ01118 1682 aa15.75■□□□□ 0.11
MBD1-218ENST00000589541 PDE6BP35913 854 aa15.74■□□□□ 0.11
MBD1-218ENST00000589541 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
MBD1-218ENST00000589541 CNBD1Q8NA66 436 aa15.74■□□□□ 0.11
MBD1-218ENST00000589541 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
MBD1-218ENST00000589541 DLEC1Q9Y238 1755 aa15.74■□□□□ 0.11
MBD1-218ENST00000589541 NFKBIEO00221 500 aa15.73■□□□□ 0.11
MBD1-218ENST00000589541 SNRPA1P09661 255 aaKnown RBP15.73■□□□□ 0.11
MBD1-218ENST00000589541 SBF1O95248 1867 aa15.73■□□□□ 0.11
MBD1-218ENST00000589541 ZC3H4Q9UPT8 1303 aaKnown RBP15.72■□□□□ 0.11
MBD1-218ENST00000589541 C21orf2O43822 256 aa15.72■□□□□ 0.11
MBD1-218ENST00000589541 FSTL1Q12841 308 aa15.72■□□□□ 0.11
MBD1-218ENST00000589541 DNAJC5GQ8N7S2 189 aa15.72■□□□□ 0.11
MBD1-218ENST00000589541 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
MBD1-218ENST00000589541 ANKRD31Q8N7Z5 1873 aa15.71■□□□□ 0.11
MBD1-218ENST00000589541 GLTPD2A6NH11 291 aa15.7■□□□□ 0.1
MBD1-218ENST00000589541 HTATSF1O43719 755 aaKnown RBP15.7■□□□□ 0.1
MBD1-218ENST00000589541 ST5P78524 1137 aa15.7■□□□□ 0.1
MBD1-218ENST00000589541 HTRA3P83110 453 aa15.7■□□□□ 0.1
MBD1-218ENST00000589541 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
MBD1-218ENST00000589541 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
MBD1-218ENST00000589541 TNRC6CQ9HCJ0 1690 aaKnown RBP15.7■□□□□ 0.1
MBD1-218ENST00000589541 COL11A2P13942 1736 aaPredicted RBP15.69■□□□□ 0.1
MBD1-218ENST00000589541 NBPF26B4DH59 902 aa15.69■□□□□ 0.1
MBD1-218ENST00000589541 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
MBD1-218ENST00000589541 NBPF10Q6P3W6 841 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms