RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TNS4Q8IZW8 715 aa20.72■□□□□ 0.91
SF3A2-204ENST00000589118 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
SF3A2-204ENST00000589118 SMC1BQ8NDV3 1235 aa20.71■□□□□ 0.91
SF3A2-204ENST00000589118 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
SF3A2-204ENST00000589118 CYP19A1P11511 503 aaPredicted RBP20.7■□□□□ 0.9
SF3A2-204ENST00000589118 MORC1Q86VD1 984 aa20.7■□□□□ 0.9
SF3A2-204ENST00000589118 ZNF219Q9P2Y4 722 aaPredicted RBP20.7■□□□□ 0.9
SF3A2-204ENST00000589118 CARMIL3Q8ND23 1372 aa20.7■□□□□ 0.9
SF3A2-204ENST00000589118 TIAM2Q8IVF5 1701 aa20.7■□□□□ 0.9
SF3A2-204ENST00000589118 PCNTO95613 3336 aa20.7■□□□□ 0.9
SF3A2-204ENST00000589118 CCDC24Q8N4L8 307 aa20.69■□□□□ 0.9
SF3A2-204ENST00000589118 ZBTB1Q9Y2K1 713 aa20.69■□□□□ 0.9
SF3A2-204ENST00000589118 NRXN2Q9P2S2 1712 aa20.69■□□□□ 0.9
SF3A2-204ENST00000589118 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
SF3A2-204ENST00000589118 SERPINB2P05120 415 aa20.68■□□□□ 0.9
SF3A2-204ENST00000589118 IL13P35225 146 aa20.68■□□□□ 0.9
SF3A2-204ENST00000589118 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
SF3A2-204ENST00000589118 GLTPD2A6NH11 291 aa20.67■□□□□ 0.9
SF3A2-204ENST00000589118 POTECB2RU33 542 aa20.67■□□□□ 0.9
SF3A2-204ENST00000589118 C2CD5Q86YS7 1000 aa20.67■□□□□ 0.9
SF3A2-204ENST00000589118 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
SF3A2-204ENST00000589118 NARFQ9UHQ1 456 aa20.67■□□□□ 0.9
SF3A2-204ENST00000589118 NFKBIEO00221 500 aa20.66■□□□□ 0.9
SF3A2-204ENST00000589118 HMOX1P09601 288 aa20.66■□□□□ 0.9
SF3A2-204ENST00000589118 HSPA1AP0DMV8 641 aaKnown RBP20.66■□□□□ 0.9
SF3A2-204ENST00000589118 HSPA1BP0DMV9 641 aaKnown RBP20.66■□□□□ 0.9
SF3A2-204ENST00000589118 VEGFAP15692 232 aaPredicted RBP20.66■□□□□ 0.9
SF3A2-204ENST00000589118 LMNB1P20700 586 aa20.66■□□□□ 0.9
SF3A2-204ENST00000589118 CANXP27824 592 aaKnown RBP20.66■□□□□ 0.9
SF3A2-204ENST00000589118 COL15A1P39059 1388 aa20.66■□□□□ 0.9
SF3A2-204ENST00000589118 RNMTO43148 476 aaKnown RBP20.65■□□□□ 0.9
SF3A2-204ENST00000589118 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
SF3A2-204ENST00000589118 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
SF3A2-204ENST00000589118 ANKRD31Q8N7Z5 1873 aa20.64■□□□□ 0.9
SF3A2-204ENST00000589118 TTLL6Q8N841 843 aa20.64■□□□□ 0.89
SF3A2-204ENST00000589118 CACNA1SQ13698 1873 aa20.61■□□□□ 0.89
SF3A2-204ENST00000589118 H0YIN7 160 aa20.61■□□□□ 0.89
SF3A2-204ENST00000589118 MTHFSDQ2M296 383 aaKnown RBP20.61■□□□□ 0.89
SF3A2-204ENST00000589118 C21orf2O43822 256 aa20.6■□□□□ 0.89
SF3A2-204ENST00000589118 POTEIP0CG38 1075 aa20.6■□□□□ 0.89
SF3A2-204ENST00000589118 POTEJP0CG39 1038 aa20.6■□□□□ 0.89
SF3A2-204ENST00000589118 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.89
SF3A2-204ENST00000589118 COL11A2P13942 1736 aaPredicted RBP20.6■□□□□ 0.89
SF3A2-204ENST00000589118 TBC1D9BQ66K14 1250 aa20.59■□□□□ 0.89
SF3A2-204ENST00000589118 MRC1P22897 1456 aa20.58■□□□□ 0.89
SF3A2-204ENST00000589118 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
SF3A2-204ENST00000589118 DICER1Q9UPY3 1922 aaKnown RBP20.58■□□□□ 0.88
SF3A2-204ENST00000589118 FER1L6Q2WGJ9 1857 aa20.58■□□□□ 0.88
SF3A2-204ENST00000589118 ZC3H4Q9UPT8 1303 aaKnown RBP20.57■□□□□ 0.88
SF3A2-204ENST00000589118 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
SF3A2-204ENST00000589118 EIF4G2P78344 907 aaKnown RBP eCLIP20.57■□□□□ 0.88
SF3A2-204ENST00000589118 MKRN1Q9UHC7 482 aaKnown RBP20.57■□□□□ 0.88
SF3A2-204ENST00000589118 TBC1D2BQ9UPU7 963 aa20.57■□□□□ 0.88
SF3A2-204ENST00000589118 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
SF3A2-204ENST00000589118 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
SF3A2-204ENST00000589118 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
SF3A2-204ENST00000589118 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
SF3A2-204ENST00000589118 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
SF3A2-204ENST00000589118 KNSTRNQ9Y448 316 aa20.55■□□□□ 0.88
SF3A2-204ENST00000589118 DDNO94850 711 aaPredicted RBP20.54■□□□□ 0.88
SF3A2-204ENST00000589118 PRR5LQ6MZQ0 368 aa20.54■□□□□ 0.88
SF3A2-204ENST00000589118 DPY19L2Q6NUT2 758 aa20.54■□□□□ 0.88
SF3A2-204ENST00000589118 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
SF3A2-204ENST00000589118 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
SF3A2-204ENST00000589118 TIMELESSQ9UNS1 1208 aa20.53■□□□□ 0.88
SF3A2-204ENST00000589118 VSIG10Q8N0Z9 540 aa20.52■□□□□ 0.88
SF3A2-204ENST00000589118 A1BGP04217 495 aa20.51■□□□□ 0.87
SF3A2-204ENST00000589118 AMER1Q5JTC6 1135 aaPredicted RBP20.51■□□□□ 0.87
SF3A2-204ENST00000589118 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
SF3A2-204ENST00000589118 CHADLQ6NUI6 762 aa20.5■□□□□ 0.87
SF3A2-204ENST00000589118 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
SF3A2-204ENST00000589118 BRIP1Q9BX63 1249 aa20.5■□□□□ 0.87
SF3A2-204ENST00000589118 SCN7AQ01118 1682 aa20.5■□□□□ 0.87
SF3A2-204ENST00000589118 STARD3NLO95772 234 aa20.49■□□□□ 0.87
SF3A2-204ENST00000589118 PDE6BP35913 854 aa20.49■□□□□ 0.87
SF3A2-204ENST00000589118 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
SF3A2-204ENST00000589118 KCNQ3O43525 872 aa20.48■□□□□ 0.87
SF3A2-204ENST00000589118 SIPA1L3O60292 1781 aaPredicted RBP20.47■□□□□ 0.87
SF3A2-204ENST00000589118 A0A087WZG4 1122 aa20.47■□□□□ 0.87
SF3A2-204ENST00000589118 FOXN1O15353 648 aa20.47■□□□□ 0.87
SF3A2-204ENST00000589118 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
SF3A2-204ENST00000589118 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
SF3A2-204ENST00000589118 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
SF3A2-204ENST00000589118 ZNF790Q6PG37 636 aa20.46■□□□□ 0.87
SF3A2-204ENST00000589118 OLFM4Q6UX06 510 aa20.46■□□□□ 0.87
SF3A2-204ENST00000589118 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
SF3A2-204ENST00000589118 CREBZFQ9NS37 354 aa20.46■□□□□ 0.87
SF3A2-204ENST00000589118 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
SF3A2-204ENST00000589118 PRAMEF22A3QJZ6 481 aa20.44■□□□□ 0.86
SF3A2-204ENST00000589118 CAMTA2O94983 1202 aa20.44■□□□□ 0.86
SF3A2-204ENST00000589118 SETDB2Q96T68 719 aa20.44■□□□□ 0.86
SF3A2-204ENST00000589118 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
SF3A2-204ENST00000589118 NPHP1O15259 732 aa20.43■□□□□ 0.86
SF3A2-204ENST00000589118 SRGNP10124 158 aa20.43■□□□□ 0.86
SF3A2-204ENST00000589118 TEFQ10587 303 aa20.43■□□□□ 0.86
SF3A2-204ENST00000589118 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
SF3A2-204ENST00000589118 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
SF3A2-204ENST00000589118 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
SF3A2-204ENST00000589118 USP16Q9Y5T5 823 aa20.42■□□□□ 0.86
SF3A2-204ENST00000589118 LTBP3Q9NS15 1303 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms