RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 N4BP2Q86UW6 1770 aaPredicted RBP21.36■■□□□ 1.01
TMEM259-206ENST00000589055 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
TMEM259-206ENST00000589055 PXDNLA1KZ92 1463 aa21.35■■□□□ 1.01
TMEM259-206ENST00000589055 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
TMEM259-206ENST00000589055 KCNQ3O43525 872 aa21.34■■□□□ 1.01
TMEM259-206ENST00000589055 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
TMEM259-206ENST00000589055 KIF3CO14782 793 aa21.33■■□□□ 1.01
TMEM259-206ENST00000589055 PRELPP51888 382 aa21.33■■□□□ 1.01
TMEM259-206ENST00000589055 DDR1Q08345 913 aa21.33■■□□□ 1.01
TMEM259-206ENST00000589055 ZNF790Q6PG37 636 aa21.33■■□□□ 1.01
TMEM259-206ENST00000589055 MCM10Q7L590 875 aa21.33■■□□□ 1.01
TMEM259-206ENST00000589055 DNAJC5GQ8N7S2 189 aa21.33■■□□□ 1.01
TMEM259-206ENST00000589055 COL15A1P39059 1388 aa21.33■■□□□ 1
TMEM259-206ENST00000589055 FCHSD2O94868 740 aa21.32■■□□□ 1
TMEM259-206ENST00000589055 DCTN1Q14203 1278 aa21.32■■□□□ 1
TMEM259-206ENST00000589055 USPL1Q5W0Q7 1092 aa21.32■■□□□ 1
TMEM259-206ENST00000589055 VSIG10Q8N0Z9 540 aa21.32■■□□□ 1
TMEM259-206ENST00000589055 PARP3Q9Y6F1 533 aa21.32■■□□□ 1
TMEM259-206ENST00000589055 CANXP27824 592 aaKnown RBP21.31■■□□□ 1
TMEM259-206ENST00000589055 TNS4Q8IZW8 715 aa21.31■■□□□ 1
TMEM259-206ENST00000589055 WDR90Q96KV7 1748 aa21.31■■□□□ 1
TMEM259-206ENST00000589055 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
TMEM259-206ENST00000589055 DDX10Q13206 875 aaKnown RBP21.3■■□□□ 1
TMEM259-206ENST00000589055 A0A0G2JLW4 131 aa21.29■■□□□ 1
TMEM259-206ENST00000589055 BTBD11A6QL63 1104 aa21.29■■□□□ 1
TMEM259-206ENST00000589055 ZPR1O75312 459 aa21.28■■□□□ 1
TMEM259-206ENST00000589055 BCL2L12Q9HB09 334 aa21.28■■□□□ 1
TMEM259-206ENST00000589055 DPEP1P16444 411 aa21.27■■□□□ 1
TMEM259-206ENST00000589055 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
TMEM259-206ENST00000589055 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
TMEM259-206ENST00000589055 DLG5Q8TDM6 1919 aa21.27■■□□□ 1
TMEM259-206ENST00000589055 PRAMEF22A3QJZ6 481 aa21.26■□□□□ 0.99
TMEM259-206ENST00000589055 POLRMTO00411 1230 aaKnown RBP21.26■□□□□ 0.99
TMEM259-206ENST00000589055 STARD3NLO95772 234 aa21.26■□□□□ 0.99
TMEM259-206ENST00000589055 NARFQ9UHQ1 456 aa21.26■□□□□ 0.99
TMEM259-206ENST00000589055 TM4SF1P30408 202 aa21.25■□□□□ 0.99
TMEM259-206ENST00000589055 ZNF330Q9Y3S2 320 aaPredicted RBP21.25■□□□□ 0.99
TMEM259-206ENST00000589055 BRCA1P38398 1863 aaKnown RBP21.24■□□□□ 0.99
TMEM259-206ENST00000589055 A1BGP04217 495 aa21.24■□□□□ 0.99
TMEM259-206ENST00000589055 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
TMEM259-206ENST00000589055 EIF5P55010 431 aaKnown RBP21.24■□□□□ 0.99
TMEM259-206ENST00000589055 TGFB2P61812 414 aa21.24■□□□□ 0.99
TMEM259-206ENST00000589055 NFIXQ14938 502 aa21.24■□□□□ 0.99
TMEM259-206ENST00000589055 PLEKHF1Q96S99 279 aa21.24■□□□□ 0.99
TMEM259-206ENST00000589055 AFDNP55196 1824 aaKnown RBP21.24■□□□□ 0.99
TMEM259-206ENST00000589055 SCN7AQ01118 1682 aa21.24■□□□□ 0.99
TMEM259-206ENST00000589055 BCS1LQ9Y276 419 aa21.23■□□□□ 0.99
TMEM259-206ENST00000589055 TOMM70O94826 608 aa21.22■□□□□ 0.99
TMEM259-206ENST00000589055 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
TMEM259-206ENST00000589055 MIS18AQ9NYP9 233 aa21.22■□□□□ 0.99
TMEM259-206ENST00000589055 SLC34A2O95436 690 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 KCNA3P22001 575 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 CHRNA5P30532 468 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 RALBP1Q15311 655 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 BICDL1Q6ZP65 573 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
TMEM259-206ENST00000589055 HTATSF1O43719 755 aaKnown RBP21.2■□□□□ 0.98
TMEM259-206ENST00000589055 JMYQ8N9B5 988 aa21.2■□□□□ 0.98
TMEM259-206ENST00000589055 KLRG1Q96E93 195 aa21.2■□□□□ 0.98
TMEM259-206ENST00000589055 TEX13AQ9BXU3 409 aaPredicted RBP21.2■□□□□ 0.98
TMEM259-206ENST00000589055 CARMIL3Q8ND23 1372 aa21.19■□□□□ 0.98
TMEM259-206ENST00000589055 NEFMP07197 916 aa21.18■□□□□ 0.98
TMEM259-206ENST00000589055 NFE2L2Q16236 605 aa21.18■□□□□ 0.98
TMEM259-206ENST00000589055 KDM3BQ7LBC6 1761 aa21.18■□□□□ 0.98
TMEM259-206ENST00000589055 A0A087WZG4 1122 aa21.17■□□□□ 0.98
TMEM259-206ENST00000589055 SERPINB2P05120 415 aa21.17■□□□□ 0.98
TMEM259-206ENST00000589055 IL6STP40189 918 aaPredicted RBP21.17■□□□□ 0.98
TMEM259-206ENST00000589055 TBC1D9BQ66K14 1250 aa21.17■□□□□ 0.98
TMEM259-206ENST00000589055 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
TMEM259-206ENST00000589055 BCORQ6W2J9 1755 aa21.17■□□□□ 0.98
TMEM259-206ENST00000589055 MYBBP1AQ9BQG0 1328 aaKnown RBP21.16■□□□□ 0.98
TMEM259-206ENST00000589055 TAF7Q15545 349 aaPredicted RBP21.16■□□□□ 0.98
TMEM259-206ENST00000589055 SNRPA1P09661 255 aaKnown RBP21.15■□□□□ 0.98
TMEM259-206ENST00000589055 CCDC24Q8N4L8 307 aa21.15■□□□□ 0.98
TMEM259-206ENST00000589055 ARFGEF1Q9Y6D6 1849 aa21.15■□□□□ 0.98
TMEM259-206ENST00000589055 LAMB4A4D0S4 1761 aa21.15■□□□□ 0.98
TMEM259-206ENST00000589055 CAMTA2O94983 1202 aa21.14■□□□□ 0.97
TMEM259-206ENST00000589055 PIM2Q9P1W9 311 aa21.14■□□□□ 0.97
TMEM259-206ENST00000589055 NBPF26B4DH59 902 aa21.13■□□□□ 0.97
TMEM259-206ENST00000589055 NBPF10Q6P3W6 841 aaKnown RBP21.13■□□□□ 0.97
TMEM259-206ENST00000589055 ARHGAP27Q6ZUM4 889 aa21.13■□□□□ 0.97
TMEM259-206ENST00000589055 DZIP3Q86Y13 1208 aaKnown RBP21.13■□□□□ 0.97
TMEM259-206ENST00000589055 NBPF15Q8N660 670 aa21.13■□□□□ 0.97
TMEM259-206ENST00000589055 ANKRD31Q8N7Z5 1873 aa21.12■□□□□ 0.97
TMEM259-206ENST00000589055 DALRD3Q5D0E6 543 aaKnown RBP21.12■□□□□ 0.97
TMEM259-206ENST00000589055 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
TMEM259-206ENST00000589055 DLEC1Q9Y238 1755 aa21.11■□□□□ 0.97
TMEM259-206ENST00000589055 HTRA3P83110 453 aa21.1■□□□□ 0.97
TMEM259-206ENST00000589055 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
TMEM259-206ENST00000589055 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
TMEM259-206ENST00000589055 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
TMEM259-206ENST00000589055 RBM46Q8TBY0 533 aaKnown RBP21.09■□□□□ 0.97
TMEM259-206ENST00000589055 PNNQ9H307 717 aaKnown RBP21.09■□□□□ 0.97
TMEM259-206ENST00000589055 RIPK4P57078 832 aa21.08■□□□□ 0.97
TMEM259-206ENST00000589055 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
TMEM259-206ENST00000589055 PRR5LQ6MZQ0 368 aa21.08■□□□□ 0.97
TMEM259-206ENST00000589055 C2CD5Q86YS7 1000 aa21.08■□□□□ 0.97
TMEM259-206ENST00000589055 PNISRQ8TF01 805 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms