RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.44
LSM14A-206ENST00000588582 NAT10Q9H0A0 1025 aaKnown RBP12.27□□□□□ -0.44
LSM14A-206ENST00000588582 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.44
LSM14A-206ENST00000588582 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 PDE1AP54750 535 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 PPARDQ03181 441 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 PPP2R5AQ15172 486 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 KRT24Q2M2I5 525 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 CFAP100Q494V2 611 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 ZMYM3Q14202 1370 aa12.27□□□□□ -0.45
LSM14A-206ENST00000588582 SURF6O75683 361 aaKnown RBP12.26□□□□□ -0.45
LSM14A-206ENST00000588582 GUCY1B3Q02153 619 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.26□□□□□ -0.45
LSM14A-206ENST00000588582 IVLP07476 585 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 LIG3P49916 1009 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 PTPN21Q16825 1174 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 LRRC8AQ8IWT6 810 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.26□□□□□ -0.456e-8■□□□□ 10.8
LSM14A-206ENST00000588582 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
LSM14A-206ENST00000588582 KIF14Q15058 1648 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 SIRT2Q8IXJ6 389 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 ASXL1Q8IXJ9 1541 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 RAD50Q92878 1312 aa12.26□□□□□ -0.45
LSM14A-206ENST00000588582 NEMFO60524 1076 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 PIK3C2GO75747 1445 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 TICAM2Q86XR7 235 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 INTS4Q96HW7 963 aaKnown RBP12.25□□□□□ -0.45
LSM14A-206ENST00000588582 NCAPGQ9BPX3 1015 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 TERF2IPQ9NYB0 399 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 RHOXF2BP0C7M4 288 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 PDE6BP35913 854 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 RHOXF2Q9BQY4 288 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 MIS18AQ9NYP9 233 aa12.25□□□□□ -0.45
LSM14A-206ENST00000588582 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 DCTPP1Q9H773 170 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 C9orf84Q5VXU9 1444 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 PDCP20941 246 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 USP8P40818 1118 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 KARSQ15046 597 aaKnown RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 IFNKQ9P0W0 207 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 RPAP2Q8IXW5 612 aaPredicted RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 CCDC12Q8WUD4 166 aaPredicted RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 PPM1EQ8WY54 764 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
LSM14A-206ENST00000588582 POLKQ9UBT6 870 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
LSM14A-206ENST00000588582 PES1O00541 588 aaKnown RBP12.23□□□□□ -0.45
LSM14A-206ENST00000588582 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
LSM14A-206ENST00000588582 SCAND2PQ9GZW5 306 aaPredicted RBP12.23□□□□□ -0.45
LSM14A-206ENST00000588582 RAI14Q9P0K7 980 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
LSM14A-206ENST00000588582 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
LSM14A-206ENST00000588582 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 FRMD3A2A2Y4 597 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 ERLIN1O75477 346 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 KIAA0754O94854 1291 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 TTC6Q86TZ1 520 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 GOLGA5Q8TBA6 731 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 GDAP1L1Q96MZ0 367 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 PLCD4Q9BRC7 762 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 GOLIM4O00461 696 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 SYCP1Q15431 976 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 CEP57Q86XR8 500 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
LSM14A-206ENST00000588582 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
LSM14A-206ENST00000588582 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 FAM107BQ9H098 131 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 TPM1P09493 284 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
LSM14A-206ENST00000588582 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 LRRN4CLQ8ND94 238 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 PDE11AQ9HCR9 933 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 NR1I2O75469 434 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 SRLQ86TD4 932 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 MRPL50Q8N5N7 158 aaKnown RBP12.22□□□□□ -0.45
LSM14A-206ENST00000588582 CPLX3Q8WVH0 158 aa12.22□□□□□ -0.45
LSM14A-206ENST00000588582 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
LSM14A-206ENST00000588582 ACTN2P35609 894 aa12.21□□□□□ -0.45
LSM14A-206ENST00000588582 GSDMDP57764 484 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms