RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 INTS3Q68E01 1043 aaKnown RBP33.05■■■□□ 2.88
SCAMP4-210ENST00000588555 ATG3Q9NT62 314 aa33.05■■■□□ 2.88
SCAMP4-210ENST00000588555 USP16Q9Y5T5 823 aa33.05■■■□□ 2.88
SCAMP4-210ENST00000588555 PDIA6Q15084 440 aa33.04■■■□□ 2.88
SCAMP4-210ENST00000588555 KAT6BQ8WYB5 2073 aa33.04■■■□□ 2.88
SCAMP4-210ENST00000588555 ANXA1P04083 346 aa33.04■■■□□ 2.88
SCAMP4-210ENST00000588555 PROSER3Q2NL68 480 aa33.04■■■□□ 2.88
SCAMP4-210ENST00000588555 FKBP5Q13451 457 aaPredicted RBP33.03■■■□□ 2.88
SCAMP4-210ENST00000588555 PTCD1O75127 700 aaKnown RBP33.02■■■□□ 2.88
SCAMP4-210ENST00000588555 QTRT2Q9H974 415 aaKnown RBP33.02■■■□□ 2.88
SCAMP4-210ENST00000588555 DDX21Q9NR30 783 aaKnown RBP eCLIP33.02■■■□□ 2.88
SCAMP4-210ENST00000588555 SYTL4Q96C24 671 aaPredicted RBP33.01■■■□□ 2.88
SCAMP4-210ENST00000588555 F6X3S4 739 aa33.01■■■□□ 2.87
SCAMP4-210ENST00000588555 ZBTB40Q9NUA8 1239 aa33.01■■■□□ 2.87
SCAMP4-210ENST00000588555 N4BP2Q86UW6 1770 aaPredicted RBP33■■■□□ 2.87
SCAMP4-210ENST00000588555 A0A0G2JS52 829 aa33■■■□□ 2.87
SCAMP4-210ENST00000588555 ZBTB7BO15156 539 aaPredicted RBP33■■■□□ 2.87
SCAMP4-210ENST00000588555 MYT1Q01538 1121 aa33■■■□□ 2.87
SCAMP4-210ENST00000588555 HYPKQ9NX55 129 aa32.99■■■□□ 2.87
SCAMP4-210ENST00000588555 ACSBG1Q96GR2 724 aa32.98■■■□□ 2.87
SCAMP4-210ENST00000588555 PXDNLA1KZ92 1463 aa32.98■■■□□ 2.87
SCAMP4-210ENST00000588555 FBXO41Q8TF61 875 aa32.97■■■□□ 2.87
SCAMP4-210ENST00000588555 PCDHB15Q9Y5E8 787 aa32.97■■■□□ 2.87
SCAMP4-210ENST00000588555 KDM2BQ8NHM5 1336 aa32.96■■■□□ 2.87
SCAMP4-210ENST00000588555 LRP10Q7Z4F1 713 aa32.96■■■□□ 2.87
SCAMP4-210ENST00000588555 VSIG10Q8N0Z9 540 aa32.96■■■□□ 2.87
SCAMP4-210ENST00000588555 ERBB4Q15303 1308 aa32.94■■■□□ 2.86
SCAMP4-210ENST00000588555 CCT4P50991 539 aaKnown RBP32.93■■■□□ 2.86
SCAMP4-210ENST00000588555 CHMP4BQ9H444 224 aaKnown RBP32.93■■■□□ 2.86
SCAMP4-210ENST00000588555 ADCY9O60503 1353 aa32.93■■■□□ 2.86
SCAMP4-210ENST00000588555 SLC4A10Q6U841 1118 aa32.93■■■□□ 2.86
SCAMP4-210ENST00000588555 SEPT12Q8IYM1 358 aa32.92■■■□□ 2.86
SCAMP4-210ENST00000588555 SLC4A9Q96Q91 983 aa32.91■■■□□ 2.86
SCAMP4-210ENST00000588555 KCNQ2O43526 872 aa32.91■■■□□ 2.86
SCAMP4-210ENST00000588555 PI4KAP2A4QPH2 592 aa32.9■■■□□ 2.86
SCAMP4-210ENST00000588555 MYL6BP14649 208 aa32.9■■■□□ 2.86
SCAMP4-210ENST00000588555 PI4KAP1Q8N8J0 262 aa32.9■■■□□ 2.86
SCAMP4-210ENST00000588555 RBM42Q9BTD8 480 aaKnown RBP32.89■■■□□ 2.86
SCAMP4-210ENST00000588555 TJP1Q07157 1748 aa32.89■■■□□ 2.85
SCAMP4-210ENST00000588555 NBPF26B4DH59 902 aa32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 NBPF14Q5TI25 921 aa32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 NBPF10Q6P3W6 841 aaKnown RBP32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 NBPF15Q8N660 670 aa32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 TEX13AQ9BXU3 409 aaPredicted RBP32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 IGHDP01880 384 aa32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 PIP4K2AP48426 406 aaPredicted RBP32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 ZNF772Q68DY9 489 aaPredicted RBP32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 CENPQQ7L2Z9 268 aaPredicted RBP32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 DNAJC10Q8IXB1 793 aa32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 DNAAF4Q8WXU2 420 aa32.88■■■□□ 2.85
SCAMP4-210ENST00000588555 NHSQ6T4R5 1651 aa32.87■■■□□ 2.85
SCAMP4-210ENST00000588555 KSR2Q6VAB6 950 aa32.86■■■□□ 2.85
SCAMP4-210ENST00000588555 ATP10DQ9P241 1426 aa32.85■■■□□ 2.85
SCAMP4-210ENST00000588555 CICQ96RK0 1608 aaPredicted RBP32.85■■■□□ 2.85
SCAMP4-210ENST00000588555 A1BGP04217 495 aa32.85■■■□□ 2.85
SCAMP4-210ENST00000588555 XAGE3Q8WTP9 111 aa32.85■■■□□ 2.85
SCAMP4-210ENST00000588555 COPS6Q7L5N1 327 aa32.84■■■□□ 2.85
SCAMP4-210ENST00000588555 DDX58O95786 925 aaKnown RBP32.83■■■□□ 2.85
SCAMP4-210ENST00000588555 AIMP1Q12904 312 aaKnown RBP32.83■■■□□ 2.85
SCAMP4-210ENST00000588555 FAM182BQ5T319 152 aa32.83■■■□□ 2.85
SCAMP4-210ENST00000588555 MEIS3Q99687 375 aa32.83■■■□□ 2.85
SCAMP4-210ENST00000588555 BEND3Q5T5X7 828 aa32.83■■■□□ 2.85
SCAMP4-210ENST00000588555 MAP3K2Q9Y2U5 619 aa32.83■■■□□ 2.85
SCAMP4-210ENST00000588555 SBF2Q86WG5 1849 aa32.82■■■□□ 2.84
SCAMP4-210ENST00000588555 PALLDQ8WX93 1383 aa32.82■■■□□ 2.84
SCAMP4-210ENST00000588555 BRWD3Q6RI45 1802 aa32.81■■■□□ 2.84
SCAMP4-210ENST00000588555 C1orf115Q9H7X2 142 aa32.81■■■□□ 2.84
SCAMP4-210ENST00000588555 STARD3NLO95772 234 aa32.81■■■□□ 2.84
SCAMP4-210ENST00000588555 PTF1AQ7RTS3 328 aa32.8■■■□□ 2.84
SCAMP4-210ENST00000588555 SMARCC1Q92922 1105 aaPredicted RBP32.8■■■□□ 2.84
SCAMP4-210ENST00000588555 SRCIN1Q9C0H9 1055 aa32.8■■■□□ 2.84
SCAMP4-210ENST00000588555 BTAF1O14981 1849 aa32.79■■■□□ 2.84
SCAMP4-210ENST00000588555 CYP19A1P11511 503 aaPredicted RBP32.79■■■□□ 2.84
SCAMP4-210ENST00000588555 RBM6P78332 1123 aaKnown RBP32.79■■■□□ 2.84
SCAMP4-210ENST00000588555 HDAC1Q13547 482 aaPredicted RBP32.79■■■□□ 2.84
SCAMP4-210ENST00000588555 ZNF831Q5JPB2 1677 aa32.78■■■□□ 2.84
SCAMP4-210ENST00000588555 RWDD1Q9H446 243 aaPredicted RBP32.78■■■□□ 2.84
SCAMP4-210ENST00000588555 LOC102724428A0A0B4J2F2 783 aa32.78■■■□□ 2.84
SCAMP4-210ENST00000588555 SIK1P57059 783 aa32.78■■■□□ 2.84
SCAMP4-210ENST00000588555 ARFGEF2Q9Y6D5 1785 aa32.77■■■□□ 2.84
SCAMP4-210ENST00000588555 ANKRD13DQ6ZTN6 518 aa32.76■■■□□ 2.84
SCAMP4-210ENST00000588555 RIC3Q7Z5B4 369 aa32.75■■■□□ 2.83
SCAMP4-210ENST00000588555 USP44Q9H0E7 712 aa32.75■■■□□ 2.83
SCAMP4-210ENST00000588555 NUP188Q5SRE5 1749 aa32.74■■■□□ 2.83
SCAMP4-210ENST00000588555 EP400Q96L91 3159 aa32.73■■■□□ 2.83
SCAMP4-210ENST00000588555 SIRT2Q8IXJ6 389 aa32.73■■■□□ 2.83
SCAMP4-210ENST00000588555 ALDH1L1O75891 902 aa32.73■■■□□ 2.83
SCAMP4-210ENST00000588555 GNAI3P08754 354 aa32.73■■■□□ 2.83
SCAMP4-210ENST00000588555 LINS1Q8NG48 757 aa32.73■■■□□ 2.83
SCAMP4-210ENST00000588555 ATP6V1AP38606 617 aa32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 TTLL7Q6ZT98 887 aa32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 KRT27Q7Z3Y8 459 aa32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 PLBD2Q8NHP8 589 aa32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 METTL22Q9BUU2 404 aaPredicted RBP32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 RREB1Q92766 1687 aa32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 IBTKQ9P2D0 1353 aaPredicted RBP32.72■■■□□ 2.83
SCAMP4-210ENST00000588555 ITPK1Q13572 414 aa32.71■■■□□ 2.83
SCAMP4-210ENST00000588555 PELP1Q8IZL8 1130 aaKnown RBP32.71■■■□□ 2.83
SCAMP4-210ENST00000588555 COL5A3P25940 1745 aaPredicted RBP32.71■■■□□ 2.83
SCAMP4-210ENST00000588555 RGS17Q9UGC6 210 aaPredicted RBP32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms