RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 COPS6Q7L5N1 327 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 XAGE3Q8WTP9 111 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 MPHOSPH8Q99549 860 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 RTCBQ9Y3I0 505 aaKnown RBP9.15□□□□□ -0.94
ZNF554-202ENST00000588534 CD163L1Q9NR16 1453 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 IGHMBP2P38935 993 aaKnown RBP9.15□□□□□ -0.94
ZNF554-202ENST00000588534 CNNM1Q9NRU3 951 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 CEP126Q9P2H0 1117 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 AKAP2Q9Y2D5 859 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 ZNF853P0CG23 659 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 RXRBP28702 533 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 VSIG10Q8N0Z9 540 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 KIF1BPQ96EK5 621 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 NOL10Q9BSC4 688 aaKnown RBP9.15□□□□□ -0.94
ZNF554-202ENST00000588534 NYXQ9GZU5 481 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 DIAPH3Q9NSV4 1193 aa9.15□□□□□ -0.94
ZNF554-202ENST00000588534 OVOS2A0A0G2JMS6 1433 aa9.15□□□□□ -0.95
ZNF554-202ENST00000588534 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.95
ZNF554-202ENST00000588534 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.95
ZNF554-202ENST00000588534 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
ZNF554-202ENST00000588534 PARP10Q53GL7 1025 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 FLAD1Q8NFF5 587 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 PLBD2Q8NHP8 589 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 CCDC158Q5M9N0 1113 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 BCL11BQ9C0K0 894 aaPredicted RBP9.14□□□□□ -0.95
ZNF554-202ENST00000588534 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
ZNF554-202ENST00000588534 INTS3Q68E01 1043 aaKnown RBP9.14□□□□□ -0.95
ZNF554-202ENST00000588534 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 LNPKQ9C0E8 428 aa9.14□□□□□ -0.95
ZNF554-202ENST00000588534 SSH2Q76I76 1423 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 HSCBQ8IWL3 235 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 IFIT5Q13325 482 aaKnown RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 CCNL1Q9UK58 526 aaPredicted RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 AFF2P51816 1311 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 RBM6P78332 1123 aaKnown RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 DZIP3Q86Y13 1208 aaKnown RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 RILPL2Q969X0 211 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 NEUROD6Q96NK8 337 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 CDC5LQ99459 802 aaKnown RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
ZNF554-202ENST00000588534 RBM19Q9Y4C8 960 aaKnown RBP9.13□□□□□ -0.95
ZNF554-202ENST00000588534 XRN1Q8IZH2 1706 aaKnown RBP9.12□□□□□ -0.95
ZNF554-202ENST00000588534 F6X3S4 739 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 GRM8O00222 908 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 ANKRD18BA2A2Z9 1011 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 SETDB2Q96T68 719 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 NRXN3Q9Y4C0 1643 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 HSPA1LP34931 641 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 CHD1LQ86WJ1 897 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 AMOTL1Q8IY63 956 aa9.12□□□□□ -0.95
ZNF554-202ENST00000588534 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 KRT27Q7Z3Y8 459 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 CCDC191Q8NCU4 936 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 SPINK5Q9NQ38 1064 aaPredicted RBP9.11□□□□□ -0.95
ZNF554-202ENST00000588534 CDC45O75419 566 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 BAG6P46379 1132 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 RNF20Q5VTR2 975 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 ZSCAN25Q6NSZ9 544 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 GJD4Q96KN9 370 aaPredicted RBP9.11□□□□□ -0.95
ZNF554-202ENST00000588534 METTL22Q9BUU2 404 aaPredicted RBP9.11□□□□□ -0.95
ZNF554-202ENST00000588534 ST5P78524 1137 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 TPTE2Q6XPS3 522 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 C1orf115Q9H7X2 142 aa9.11□□□□□ -0.95
ZNF554-202ENST00000588534 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 CCDC152Q4G0S7 254 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 UTP14AQ9BVJ6 771 aaKnown RBP9.1□□□□□ -0.95
ZNF554-202ENST00000588534 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
ZNF554-202ENST00000588534 GOLGA6L22H0YM25 854 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 ANKRD44Q8N8A2 993 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.1□□□□□ -0.95
ZNF554-202ENST00000588534 STK32BQ9NY57 414 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 SPATA31A1Q5TZJ5 1347 aa9.1□□□□□ -0.95
ZNF554-202ENST00000588534 CYP27B1O15528 508 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 IFIT1P09914 478 aaKnown RBP9.09□□□□□ -0.95
ZNF554-202ENST00000588534 ZKSCAN1P17029 563 aaPredicted RBP9.09□□□□□ -0.95
ZNF554-202ENST00000588534 ATP8B2P98198 1209 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 FMN2Q9NZ56 1722 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 DCAF8L1A6NGE4 600 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 NBPF5PQ86XG9 351 aaPredicted RBP9.09□□□□□ -0.95
ZNF554-202ENST00000588534 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.09□□□□□ -0.95
ZNF554-202ENST00000588534 LOC102724428A0A0B4J2F2 783 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 GLRX3O76003 335 aaKnown RBP9.09□□□□□ -0.95
ZNF554-202ENST00000588534 PDE4AP27815 886 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 IL6STP40189 918 aaPredicted RBP9.09□□□□□ -0.95
ZNF554-202ENST00000588534 SIK1P57059 783 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 BICDL1Q6ZP65 573 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 UBE3BQ7Z3V4 1068 aa9.09□□□□□ -0.95
ZNF554-202ENST00000588534 NLRP3Q96P20 1036 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms