RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 USP48Q86UV5 1035 aa18.79■□□□□ 0.6
TPGS1-202ENST00000588278 PDCL2Q8N4E4 241 aa18.79■□□□□ 0.6
TPGS1-202ENST00000588278 FLT4P35916 1363 aa18.79■□□□□ 0.6
TPGS1-202ENST00000588278 PYCARDQ9ULZ3 195 aa18.79■□□□□ 0.6
TPGS1-202ENST00000588278 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 BRD1O95696 1058 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
TPGS1-202ENST00000588278 PNMA6EA0A0J9YXQ4 647 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 RIOK3O14730 519 aaKnown RBP18.78■□□□□ 0.6
TPGS1-202ENST00000588278 ANXA1P04083 346 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 PRIMPOLQ96LW4 560 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 PLEKHG1Q9ULL1 1385 aa18.78■□□□□ 0.6
TPGS1-202ENST00000588278 RGS12O14924 1447 aa18.77■□□□□ 0.6
TPGS1-202ENST00000588278 GNAI2P04899 355 aa18.77■□□□□ 0.6
TPGS1-202ENST00000588278 ATP10DQ9P241 1426 aa18.77■□□□□ 0.6
TPGS1-202ENST00000588278 MAP4K4O95819 1239 aaPredicted RBP18.77■□□□□ 0.6
TPGS1-202ENST00000588278 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
TPGS1-202ENST00000588278 CRB1P82279 1406 aa18.76■□□□□ 0.59
TPGS1-202ENST00000588278 HOXC9P31274 260 aa18.76■□□□□ 0.59
TPGS1-202ENST00000588278 THEMISQ8N1K5 641 aaPredicted RBP18.76■□□□□ 0.59
TPGS1-202ENST00000588278 IL17REQ8NFR9 667 aa18.76■□□□□ 0.59
TPGS1-202ENST00000588278 PHAXQ9H814 394 aaKnown RBP18.76■□□□□ 0.59
TPGS1-202ENST00000588278 ITSN1Q15811 1721 aa18.76■□□□□ 0.59
TPGS1-202ENST00000588278 HMGN5P82970 282 aaKnown RBP18.76■□□□□ 0.59
TPGS1-202ENST00000588278 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
TPGS1-202ENST00000588278 AP5Z1O43299 807 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 C3P01024 1663 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 ERC2O15083 957 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
TPGS1-202ENST00000588278 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 CGNQ9P2M7 1197 aaKnown RBP18.75■□□□□ 0.59
TPGS1-202ENST00000588278 CNPY2Q9Y2B0 182 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
TPGS1-202ENST00000588278 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 KIAA0232Q92628 1395 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 VGLL3A8MV65 326 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 REC8O95072 547 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 NAA30Q147X3 362 aaPredicted RBP18.75■□□□□ 0.59
TPGS1-202ENST00000588278 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
TPGS1-202ENST00000588278 MON2Q7Z3U7 1717 aa18.74■□□□□ 0.59
TPGS1-202ENST00000588278 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
TPGS1-202ENST00000588278 PDE1AP54750 535 aa18.74■□□□□ 0.59
TPGS1-202ENST00000588278 GTF2E1P29083 439 aaPredicted RBP18.74■□□□□ 0.59
TPGS1-202ENST00000588278 GIMAP6Q6P9H5 292 aa18.74■□□□□ 0.59
TPGS1-202ENST00000588278 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
TPGS1-202ENST00000588278 KNDC1Q76NI1 1749 aa18.73■□□□□ 0.59
TPGS1-202ENST00000588278 KCNF1Q9H3M0 494 aa18.73■□□□□ 0.59
TPGS1-202ENST00000588278 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
TPGS1-202ENST00000588278 ESCO1Q5FWF5 840 aa18.73■□□□□ 0.59
TPGS1-202ENST00000588278 SYAP1Q96A49 352 aaPredicted RBP18.73■□□□□ 0.59
TPGS1-202ENST00000588278 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
TPGS1-202ENST00000588278 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
TPGS1-202ENST00000588278 GTF2F1P35269 517 aaKnown RBP eCLIP18.72■□□□□ 0.59
TPGS1-202ENST00000588278 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
TPGS1-202ENST00000588278 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
TPGS1-202ENST00000588278 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
TPGS1-202ENST00000588278 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
TPGS1-202ENST00000588278 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
TPGS1-202ENST00000588278 PEAK1Q9H792 1746 aa18.72■□□□□ 0.59
TPGS1-202ENST00000588278 USP31Q70CQ4 1352 aa18.71■□□□□ 0.59
TPGS1-202ENST00000588278 ZNF771Q7L3S4 317 aaPredicted RBP18.71■□□□□ 0.59
TPGS1-202ENST00000588278 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
TPGS1-202ENST00000588278 ARHGEF10O15013 1369 aa18.71■□□□□ 0.59
TPGS1-202ENST00000588278 FIBPO43427 364 aa18.71■□□□□ 0.59
TPGS1-202ENST00000588278 PSME1Q06323 249 aa18.71■□□□□ 0.59
TPGS1-202ENST00000588278 TAF7Q15545 349 aaPredicted RBP18.71■□□□□ 0.59
TPGS1-202ENST00000588278 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
TPGS1-202ENST00000588278 UBTFL1P0CB47 393 aaPredicted RBP18.7■□□□□ 0.58
TPGS1-202ENST00000588278 SRCIN1Q9C0H9 1055 aa18.7■□□□□ 0.58
TPGS1-202ENST00000588278 UBR1Q8IWV7 1749 aa18.69■□□□□ 0.58
TPGS1-202ENST00000588278 KCNQ3O43525 872 aa18.69■□□□□ 0.58
TPGS1-202ENST00000588278 MPRIPQ6WCQ1 1025 aa18.69■□□□□ 0.58
TPGS1-202ENST00000588278 KIF20AO95235 890 aa18.69■□□□□ 0.58
TPGS1-202ENST00000588278 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
TPGS1-202ENST00000588278 SURF6O75683 361 aaKnown RBP18.68■□□□□ 0.58
TPGS1-202ENST00000588278 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
TPGS1-202ENST00000588278 GNAI3P08754 354 aa18.68■□□□□ 0.58
TPGS1-202ENST00000588278 MX1P20591 662 aa18.68■□□□□ 0.58
TPGS1-202ENST00000588278 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
TPGS1-202ENST00000588278 SPTLC3Q9NUV7 552 aa18.68■□□□□ 0.58
TPGS1-202ENST00000588278 PHF14O94880 888 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 NBPF6Q5VWK0 638 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 NBPF4Q96M43 638 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 KDM4AO75164 1064 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 KIAA1524Q8TCG1 905 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 IL25Q9H293 177 aa18.67■□□□□ 0.58
TPGS1-202ENST00000588278 C16orf45Q96MC5 204 aaPredicted RBP18.67■□□□□ 0.58
TPGS1-202ENST00000588278 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
TPGS1-202ENST00000588278 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
TPGS1-202ENST00000588278 TEFQ10587 303 aa18.65■□□□□ 0.58
TPGS1-202ENST00000588278 LRMPQ12912 555 aa18.65■□□□□ 0.58
TPGS1-202ENST00000588278 CHAF1AQ13111 956 aaPredicted RBP18.65■□□□□ 0.58
TPGS1-202ENST00000588278 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
TPGS1-202ENST00000588278 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
TPGS1-202ENST00000588278 TCHHQ07283 1943 aa18.65■□□□□ 0.58
TPGS1-202ENST00000588278 PTGS1P23219 599 aa18.65■□□□□ 0.58
TPGS1-202ENST00000588278 OS9Q13438 667 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms