RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 SOS1Q07889 1333 aaPredicted RBP19.73■□□□□ 0.75
HDAC5-207ENST00000588261 KIF3CO14782 793 aa19.72■□□□□ 0.75
HDAC5-207ENST00000588261 FCHSD2O94868 740 aa19.72■□□□□ 0.75
HDAC5-207ENST00000588261 CYP19A1P11511 503 aaPredicted RBP19.72■□□□□ 0.75
HDAC5-207ENST00000588261 UBR2Q8IWV8 1755 aa19.72■□□□□ 0.75
HDAC5-207ENST00000588261 U2AF1L5P0DN76 240 aaPredicted RBP19.71■□□□□ 0.75
HDAC5-207ENST00000588261 APLP1P51693 650 aa19.71■□□□□ 0.75
HDAC5-207ENST00000588261 U2AF1Q01081 240 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDAC5-207ENST00000588261 WDR43Q15061 677 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDAC5-207ENST00000588261 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
HDAC5-207ENST00000588261 ZBTB1Q9Y2K1 713 aa19.71■□□□□ 0.75
HDAC5-207ENST00000588261 POLRMTO00411 1230 aaKnown RBP19.7■□□□□ 0.74
HDAC5-207ENST00000588261 TM4SF1P30408 202 aa19.7■□□□□ 0.74
HDAC5-207ENST00000588261 BCL2L12Q9HB09 334 aa19.7■□□□□ 0.74
HDAC5-207ENST00000588261 CCDC87Q9NVE4 849 aa19.7■□□□□ 0.74
HDAC5-207ENST00000588261 BCS1LQ9Y276 419 aa19.7■□□□□ 0.74
HDAC5-207ENST00000588261 TOMM70O94826 608 aa19.69■□□□□ 0.74
HDAC5-207ENST00000588261 USPL1Q5W0Q7 1092 aa19.69■□□□□ 0.74
HDAC5-207ENST00000588261 IL17REQ8NFR9 667 aa19.69■□□□□ 0.74
HDAC5-207ENST00000588261 RSPH6AQ9H0K4 717 aa19.69■□□□□ 0.74
HDAC5-207ENST00000588261 PARP3Q9Y6F1 533 aa19.69■□□□□ 0.74
HDAC5-207ENST00000588261 CCDC184Q52MB2 194 aa19.68■□□□□ 0.74
HDAC5-207ENST00000588261 MIER1Q8N108 512 aa19.68■□□□□ 0.74
HDAC5-207ENST00000588261 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
HDAC5-207ENST00000588261 CHRNA5P30532 468 aa19.67■□□□□ 0.74
HDAC5-207ENST00000588261 ARHGAP27Q6ZUM4 889 aa19.67■□□□□ 0.74
HDAC5-207ENST00000588261 SIPA1L3O60292 1781 aaPredicted RBP19.66■□□□□ 0.74
HDAC5-207ENST00000588261 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
HDAC5-207ENST00000588261 ARFGEF1Q9Y6D6 1849 aa19.66■□□□□ 0.74
HDAC5-207ENST00000588261 COL15A1P39059 1388 aa19.66■□□□□ 0.74
HDAC5-207ENST00000588261 NRXN2Q9P2S2 1712 aa19.65■□□□□ 0.74
HDAC5-207ENST00000588261 PRKAR2BP31323 418 aa19.65■□□□□ 0.74
HDAC5-207ENST00000588261 NFIXQ14938 502 aa19.65■□□□□ 0.74
HDAC5-207ENST00000588261 NEFMP07197 916 aa19.64■□□□□ 0.73
HDAC5-207ENST00000588261 NARFQ9UHQ1 456 aa19.64■□□□□ 0.73
HDAC5-207ENST00000588261 AFDNP55196 1824 aaKnown RBP19.63■□□□□ 0.73
HDAC5-207ENST00000588261 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
HDAC5-207ENST00000588261 VSIG10Q8N0Z9 540 aa19.63■□□□□ 0.73
HDAC5-207ENST00000588261 ZNF496Q96IT1 587 aaPredicted RBP19.63■□□□□ 0.73
HDAC5-207ENST00000588261 PLEKHF1Q96S99 279 aa19.63■□□□□ 0.73
HDAC5-207ENST00000588261 ADAMTS8Q9UP79 889 aa19.63■□□□□ 0.73
HDAC5-207ENST00000588261 CARMIL3Q8ND23 1372 aa19.62■□□□□ 0.73
HDAC5-207ENST00000588261 KCNQ3O43525 872 aa19.62■□□□□ 0.73
HDAC5-207ENST00000588261 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
HDAC5-207ENST00000588261 MAPK8IP3Q9UPT6 1336 aa19.61■□□□□ 0.73
HDAC5-207ENST00000588261 EIF5P55010 431 aaKnown RBP19.61■□□□□ 0.73
HDAC5-207ENST00000588261 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
HDAC5-207ENST00000588261 PIM2Q9P1W9 311 aa19.61■□□□□ 0.73
HDAC5-207ENST00000588261 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
HDAC5-207ENST00000588261 ZNF790Q6PG37 636 aa19.6■□□□□ 0.73
HDAC5-207ENST00000588261 RUNDC1Q96C34 613 aa19.6■□□□□ 0.73
HDAC5-207ENST00000588261 HEG1Q9ULI3 1381 aa19.59■□□□□ 0.73
HDAC5-207ENST00000588261 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
HDAC5-207ENST00000588261 ZPR1O75312 459 aa19.59■□□□□ 0.73
HDAC5-207ENST00000588261 PRELPP51888 382 aa19.59■□□□□ 0.73
HDAC5-207ENST00000588261 RBM46Q8TBY0 533 aaKnown RBP19.59■□□□□ 0.73
HDAC5-207ENST00000588261 NMRK2Q9NPI5 230 aa19.59■□□□□ 0.73
HDAC5-207ENST00000588261 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
HDAC5-207ENST00000588261 C9orf131Q5VYM1 1079 aa19.58■□□□□ 0.72
HDAC5-207ENST00000588261 KDM2BQ8NHM5 1336 aa19.57■□□□□ 0.72
HDAC5-207ENST00000588261 DNAJC5GQ8N7S2 189 aa19.57■□□□□ 0.72
HDAC5-207ENST00000588261 SBF1O95248 1867 aa19.56■□□□□ 0.72
HDAC5-207ENST00000588261 SCN7AQ01118 1682 aa19.56■□□□□ 0.72
HDAC5-207ENST00000588261 SERPINB2P05120 415 aa19.56■□□□□ 0.72
HDAC5-207ENST00000588261 WDR90Q96KV7 1748 aa19.56■□□□□ 0.72
HDAC5-207ENST00000588261 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
HDAC5-207ENST00000588261 PRAMEF22A3QJZ6 481 aa19.55■□□□□ 0.72
HDAC5-207ENST00000588261 FSTL1Q12841 308 aa19.55■□□□□ 0.72
HDAC5-207ENST00000588261 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
HDAC5-207ENST00000588261 TBC1D9BQ66K14 1250 aa19.55■□□□□ 0.72
HDAC5-207ENST00000588261 TTC5Q8N0Z6 440 aa19.55■□□□□ 0.72
HDAC5-207ENST00000588261 ANKRD31Q8N7Z5 1873 aa19.54■□□□□ 0.72
HDAC5-207ENST00000588261 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
HDAC5-207ENST00000588261 A1BGP04217 495 aa19.54■□□□□ 0.72
HDAC5-207ENST00000588261 RASSF7Q02833 373 aa19.54■□□□□ 0.72
HDAC5-207ENST00000588261 TEFQ10587 303 aa19.54■□□□□ 0.72
HDAC5-207ENST00000588261 NFE2L2Q16236 605 aa19.53■□□□□ 0.72
HDAC5-207ENST00000588261 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
HDAC5-207ENST00000588261 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
HDAC5-207ENST00000588261 TBC1D2BQ9UPU7 963 aa19.53■□□□□ 0.72
HDAC5-207ENST00000588261 DLG5Q8TDM6 1919 aa19.53■□□□□ 0.72
HDAC5-207ENST00000588261 STARD3NLO95772 234 aa19.52■□□□□ 0.72
HDAC5-207ENST00000588261 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.72
HDAC5-207ENST00000588261 CCDC24Q8N4L8 307 aa19.52■□□□□ 0.72
HDAC5-207ENST00000588261 NGEFQ8N5V2 710 aa19.52■□□□□ 0.72
HDAC5-207ENST00000588261 USP16Q9Y5T5 823 aa19.52■□□□□ 0.72
HDAC5-207ENST00000588261 COL11A2P13942 1736 aaPredicted RBP19.51■□□□□ 0.71
HDAC5-207ENST00000588261 LMOD3Q0VAK6 560 aa19.51■□□□□ 0.71
HDAC5-207ENST00000588261 DCTN1Q14203 1278 aa19.51■□□□□ 0.71
HDAC5-207ENST00000588261 MCM10Q7L590 875 aa19.51■□□□□ 0.71
HDAC5-207ENST00000588261 CCDC146Q8IYE0 955 aa19.51■□□□□ 0.71
HDAC5-207ENST00000588261 RNF181Q9P0P0 153 aa19.51■□□□□ 0.71
HDAC5-207ENST00000588261 TNRC6CQ9HCJ0 1690 aaKnown RBP19.51■□□□□ 0.71
HDAC5-207ENST00000588261 CAMTA2O94983 1202 aa19.5■□□□□ 0.71
HDAC5-207ENST00000588261 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
HDAC5-207ENST00000588261 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
HDAC5-207ENST00000588261 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
HDAC5-207ENST00000588261 IL6STP40189 918 aaPredicted RBP19.49■□□□□ 0.71
HDAC5-207ENST00000588261 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
HDAC5-207ENST00000588261 KLRG1Q96E93 195 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms