RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 NMRK2Q9NPI5 230 aa19.08■□□□□ 0.64
ERCC1-205ENST00000587888 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.64
ERCC1-205ENST00000587888 BRCA1P38398 1863 aaKnown RBP19.07■□□□□ 0.64
ERCC1-205ENST00000587888 COL15A1P39059 1388 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 KCPQ6ZWJ8 1503 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 MRC1P22897 1456 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 GNAT3A8MTJ3 354 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 TEFQ10587 303 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 IL17REQ8NFR9 667 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 BCL2L12Q9HB09 334 aa19.06■□□□□ 0.64
ERCC1-205ENST00000587888 TOMM70O94826 608 aa19.05■□□□□ 0.64
ERCC1-205ENST00000587888 STARD3NLO95772 234 aa19.05■□□□□ 0.64
ERCC1-205ENST00000587888 SERPINB2P05120 415 aa19.05■□□□□ 0.64
ERCC1-205ENST00000587888 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
ERCC1-205ENST00000587888 RNF181Q9P0P0 153 aa19.05■□□□□ 0.64
ERCC1-205ENST00000587888 GAS2L2Q8NHY3 880 aa19.04■□□□□ 0.64
ERCC1-205ENST00000587888 ARFGEF1Q9Y6D6 1849 aa19.03■□□□□ 0.64
ERCC1-205ENST00000587888 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
ERCC1-205ENST00000587888 ZNF496Q96IT1 587 aaPredicted RBP19.03■□□□□ 0.64
ERCC1-205ENST00000587888 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
ERCC1-205ENST00000587888 NPC1L1Q9UHC9 1359 aa19.02■□□□□ 0.64
ERCC1-205ENST00000587888 A0A087WZG4 1122 aa19.01■□□□□ 0.63
ERCC1-205ENST00000587888 EIF5P55010 431 aaKnown RBP19.01■□□□□ 0.63
ERCC1-205ENST00000587888 C16orf71Q8IYS4 520 aaPredicted RBP19.01■□□□□ 0.63
ERCC1-205ENST00000587888 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
ERCC1-205ENST00000587888 APLP1P51693 650 aa19■□□□□ 0.63
ERCC1-205ENST00000587888 C2CD5Q86YS7 1000 aa19■□□□□ 0.63
ERCC1-205ENST00000587888 CFAP53Q96M91 514 aa19■□□□□ 0.63
ERCC1-205ENST00000587888 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
ERCC1-205ENST00000587888 RRAGCQ9HB90 399 aa19■□□□□ 0.63
ERCC1-205ENST00000587888 TBC1D2BQ9UPU7 963 aa19■□□□□ 0.63
ERCC1-205ENST00000587888 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
ERCC1-205ENST00000587888 AFDNP55196 1824 aaKnown RBP19■□□□□ 0.63
ERCC1-205ENST00000587888 HEG1Q9ULI3 1381 aa18.99■□□□□ 0.63
ERCC1-205ENST00000587888 PRKAR2BP31323 418 aa18.99■□□□□ 0.63
ERCC1-205ENST00000587888 RASSF7Q02833 373 aa18.99■□□□□ 0.63
ERCC1-205ENST00000587888 TBC1D9BQ66K14 1250 aa18.99■□□□□ 0.63
ERCC1-205ENST00000587888 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
ERCC1-205ENST00000587888 H0YIN7 160 aa18.98■□□□□ 0.63
ERCC1-205ENST00000587888 KCNQ3O43525 872 aa18.98■□□□□ 0.63
ERCC1-205ENST00000587888 A1BGP04217 495 aa18.98■□□□□ 0.63
ERCC1-205ENST00000587888 TTLL6Q8N841 843 aa18.98■□□□□ 0.63
ERCC1-205ENST00000587888 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
ERCC1-205ENST00000587888 UBR2Q8IWV8 1755 aa18.98■□□□□ 0.63
ERCC1-205ENST00000587888 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
ERCC1-205ENST00000587888 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
ERCC1-205ENST00000587888 CCDC24Q8N4L8 307 aa18.97■□□□□ 0.63
ERCC1-205ENST00000587888 RBM46Q8TBY0 533 aaKnown RBP18.96■□□□□ 0.63
ERCC1-205ENST00000587888 ZNF622Q969S3 477 aaKnown RBP eCLIP18.96■□□□□ 0.63
ERCC1-205ENST00000587888 RSPH6AQ9H0K4 717 aa18.96■□□□□ 0.63
ERCC1-205ENST00000587888 NUDCQ9Y266 331 aa18.96■□□□□ 0.63
ERCC1-205ENST00000587888 SBF1O95248 1867 aa18.95■□□□□ 0.62
ERCC1-205ENST00000587888 U2AF1L5P0DN76 240 aaPredicted RBP18.95■□□□□ 0.62
ERCC1-205ENST00000587888 U2AF1Q01081 240 aaKnown RBP eCLIP18.95■□□□□ 0.62
ERCC1-205ENST00000587888 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
ERCC1-205ENST00000587888 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
ERCC1-205ENST00000587888 CARMIL3Q8ND23 1372 aa18.94■□□□□ 0.62
ERCC1-205ENST00000587888 NRXN2Q9P2S2 1712 aa18.94■□□□□ 0.62
ERCC1-205ENST00000587888 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
ERCC1-205ENST00000587888 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
ERCC1-205ENST00000587888 LMNB1P20700 586 aa18.93■□□□□ 0.62
ERCC1-205ENST00000587888 PPP2R1AP30153 589 aa18.93■□□□□ 0.62
ERCC1-205ENST00000587888 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
ERCC1-205ENST00000587888 PRELPP51888 382 aa18.93■□□□□ 0.62
ERCC1-205ENST00000587888 MCM10Q7L590 875 aa18.93■□□□□ 0.62
ERCC1-205ENST00000587888 DNAJC5GQ8N7S2 189 aa18.93■□□□□ 0.62
ERCC1-205ENST00000587888 RTF1Q92541 710 aaKnown RBP18.93■□□□□ 0.62
ERCC1-205ENST00000587888 CEMIPQ8WUJ3 1361 aa18.93■□□□□ 0.62
ERCC1-205ENST00000587888 NPHP1O15259 732 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 PDE6BP35913 854 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 HTRA3P83110 453 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 PRR5LQ6MZQ0 368 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 SETDB2Q96T68 719 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 BRIP1Q9BX63 1249 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 CEP350Q5VT06 3117 aa18.92■□□□□ 0.62
ERCC1-205ENST00000587888 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
ERCC1-205ENST00000587888 PRAMEF22A3QJZ6 481 aa18.91■□□□□ 0.62
ERCC1-205ENST00000587888 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
ERCC1-205ENST00000587888 C21orf2O43822 256 aa18.9■□□□□ 0.62
ERCC1-205ENST00000587888 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
ERCC1-205ENST00000587888 FSTL1Q12841 308 aa18.9■□□□□ 0.62
ERCC1-205ENST00000587888 DCTN1Q14203 1278 aa18.9■□□□□ 0.62
ERCC1-205ENST00000587888 GLTPD2A6NH11 291 aa18.89■□□□□ 0.61
ERCC1-205ENST00000587888 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
ERCC1-205ENST00000587888 NFKBIEO00221 500 aa18.88■□□□□ 0.61
ERCC1-205ENST00000587888 SNRPA1P09661 255 aaKnown RBP18.88■□□□□ 0.61
ERCC1-205ENST00000587888 CNBD1Q8NA66 436 aa18.88■□□□□ 0.61
ERCC1-205ENST00000587888 PDZRN3Q9UPQ7 1066 aa18.88■□□□□ 0.61
ERCC1-205ENST00000587888 VEGFAP15692 232 aaPredicted RBP18.87■□□□□ 0.61
ERCC1-205ENST00000587888 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
ERCC1-205ENST00000587888 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
ERCC1-205ENST00000587888 ST5P78524 1137 aa18.86■□□□□ 0.61
ERCC1-205ENST00000587888 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
ERCC1-205ENST00000587888 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
ERCC1-205ENST00000587888 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
ERCC1-205ENST00000587888 MIS18AQ9NYP9 233 aa18.85■□□□□ 0.61
ERCC1-205ENST00000587888 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
ERCC1-205ENST00000587888 TAF7Q15545 349 aaPredicted RBP18.84■□□□□ 0.61
ERCC1-205ENST00000587888 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms