RNA–Protein interactions for RNA: ENST00000587425.5

TCF3-211, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-211ENST00000587425 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
TCF3-211ENST00000587425 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
TCF3-211ENST00000587425 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
TCF3-211ENST00000587425 TM4SF1P30408 202 aa20.5■□□□□ 0.87
TCF3-211ENST00000587425 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
TCF3-211ENST00000587425 TEFQ10587 303 aa20.5■□□□□ 0.87
TCF3-211ENST00000587425 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
TCF3-211ENST00000587425 GAS2L2Q8NHY3 880 aa20.5■□□□□ 0.87
TCF3-211ENST00000587425 NFIXQ14938 502 aa20.49■□□□□ 0.87
TCF3-211ENST00000587425 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
TCF3-211ENST00000587425 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
TCF3-211ENST00000587425 AFDNP55196 1824 aaKnown RBP20.48■□□□□ 0.87
TCF3-211ENST00000587425 BCL2L12Q9HB09 334 aa20.48■□□□□ 0.87
TCF3-211ENST00000587425 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
TCF3-211ENST00000587425 NARFQ9UHQ1 456 aa20.48■□□□□ 0.87
TCF3-211ENST00000587425 KCNQ3O43525 872 aa20.47■□□□□ 0.87
TCF3-211ENST00000587425 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
TCF3-211ENST00000587425 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
TCF3-211ENST00000587425 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
TCF3-211ENST00000587425 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
TCF3-211ENST00000587425 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
TCF3-211ENST00000587425 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
TCF3-211ENST00000587425 DALRD3Q5D0E6 543 aaKnown RBP20.46■□□□□ 0.87
TCF3-211ENST00000587425 ZNF790Q6PG37 636 aa20.46■□□□□ 0.87
TCF3-211ENST00000587425 BICDL1Q6ZP65 573 aa20.46■□□□□ 0.87
TCF3-211ENST00000587425 KIF3CO14782 793 aa20.45■□□□□ 0.86
TCF3-211ENST00000587425 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.86
TCF3-211ENST00000587425 STARD3NLO95772 234 aa20.44■□□□□ 0.86
TCF3-211ENST00000587425 U2AF1L5P0DN76 240 aaPredicted RBP20.44■□□□□ 0.86
TCF3-211ENST00000587425 U2AF1Q01081 240 aaKnown RBP eCLIP20.44■□□□□ 0.86
TCF3-211ENST00000587425 C9orf131Q5VYM1 1079 aa20.44■□□□□ 0.86
TCF3-211ENST00000587425 SERPINB2P05120 415 aa20.43■□□□□ 0.86
TCF3-211ENST00000587425 CARMIL3Q8ND23 1372 aa20.43■□□□□ 0.86
TCF3-211ENST00000587425 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
TCF3-211ENST00000587425 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
TCF3-211ENST00000587425 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
TCF3-211ENST00000587425 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 A1BGP04217 495 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
TCF3-211ENST00000587425 MCM10Q7L590 875 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 CCDC24Q8N4L8 307 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 NMRK2Q9NPI5 230 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
TCF3-211ENST00000587425 DCTN1Q14203 1278 aa20.4■□□□□ 0.86
TCF3-211ENST00000587425 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
TCF3-211ENST00000587425 FMNL2Q96PY5 1086 aa20.4■□□□□ 0.86
TCF3-211ENST00000587425 SCN7AQ01118 1682 aa20.39■□□□□ 0.86
TCF3-211ENST00000587425 PRAMEF22A3QJZ6 481 aa20.39■□□□□ 0.85
TCF3-211ENST00000587425 RASSF7Q02833 373 aa20.39■□□□□ 0.85
TCF3-211ENST00000587425 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
TCF3-211ENST00000587425 HSPA6P17066 643 aa20.38■□□□□ 0.85
TCF3-211ENST00000587425 C2CD5Q86YS7 1000 aa20.38■□□□□ 0.85
TCF3-211ENST00000587425 A0A087WZG4 1122 aa20.37■□□□□ 0.85
TCF3-211ENST00000587425 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
TCF3-211ENST00000587425 RTF1Q92541 710 aaKnown RBP20.36■□□□□ 0.85
TCF3-211ENST00000587425 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
TCF3-211ENST00000587425 SBF1O95248 1867 aa20.36■□□□□ 0.85
TCF3-211ENST00000587425 ANKRD31Q8N7Z5 1873 aa20.36■□□□□ 0.85
TCF3-211ENST00000587425 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
TCF3-211ENST00000587425 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
TCF3-211ENST00000587425 CAMTA2O94983 1202 aa20.33■□□□□ 0.85
TCF3-211ENST00000587425 ZNF219Q9P2Y4 722 aaPredicted RBP20.33■□□□□ 0.85
TCF3-211ENST00000587425 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.84
TCF3-211ENST00000587425 H0YIN7 160 aa20.32■□□□□ 0.84
TCF3-211ENST00000587425 PRELPP51888 382 aa20.32■□□□□ 0.84
TCF3-211ENST00000587425 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
TCF3-211ENST00000587425 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
TCF3-211ENST00000587425 TTLL6Q8N841 843 aa20.32■□□□□ 0.84
TCF3-211ENST00000587425 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
TCF3-211ENST00000587425 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
TCF3-211ENST00000587425 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
TCF3-211ENST00000587425 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.84
TCF3-211ENST00000587425 TOMM70O94826 608 aa20.3■□□□□ 0.84
TCF3-211ENST00000587425 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
TCF3-211ENST00000587425 NPHP1O15259 732 aa20.29■□□□□ 0.84
TCF3-211ENST00000587425 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
TCF3-211ENST00000587425 RRAGCQ9HB90 399 aa20.29■□□□□ 0.84
TCF3-211ENST00000587425 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
TCF3-211ENST00000587425 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
TCF3-211ENST00000587425 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
TCF3-211ENST00000587425 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
TCF3-211ENST00000587425 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
TCF3-211ENST00000587425 NFKBIEO00221 500 aa20.27■□□□□ 0.84
TCF3-211ENST00000587425 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
TCF3-211ENST00000587425 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.84
TCF3-211ENST00000587425 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
TCF3-211ENST00000587425 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
TCF3-211ENST00000587425 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
TCF3-211ENST00000587425 BRIP1Q9BX63 1249 aa20.27■□□□□ 0.84
TCF3-211ENST00000587425 C21orf2O43822 256 aa20.26■□□□□ 0.83
TCF3-211ENST00000587425 LMNB1P20700 586 aa20.26■□□□□ 0.83
TCF3-211ENST00000587425 TIAM2Q8IVF5 1701 aa20.26■□□□□ 0.83
TCF3-211ENST00000587425 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
TCF3-211ENST00000587425 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
TCF3-211ENST00000587425 PDE6BP35913 854 aa20.25■□□□□ 0.83
TCF3-211ENST00000587425 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
TCF3-211ENST00000587425 TNRC6CQ9HCJ0 1690 aaKnown RBP20.24■□□□□ 0.83
TCF3-211ENST00000587425 HTRA3P83110 453 aa20.24■□□□□ 0.83
TCF3-211ENST00000587425 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms