RNA–Protein interactions for RNA: ENST00000587376.5

ERCC2-210, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-210ENST00000587376 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
ERCC2-210ENST00000587376 FKBP8Q14318 412 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 USPL1Q5W0Q7 1092 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
ERCC2-210ENST00000587376 ZNF496Q96IT1 587 aaPredicted RBP20.45■□□□□ 0.86
ERCC2-210ENST00000587376 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
ERCC2-210ENST00000587376 SIPA1L3O60292 1781 aaPredicted RBP20.44■□□□□ 0.86
ERCC2-210ENST00000587376 BCS1LQ9Y276 419 aa20.44■□□□□ 0.86
ERCC2-210ENST00000587376 ZNF330Q9Y3S2 320 aaPredicted RBP20.44■□□□□ 0.86
ERCC2-210ENST00000587376 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
ERCC2-210ENST00000587376 A0A0G2JLW4 131 aa20.43■□□□□ 0.86
ERCC2-210ENST00000587376 N4BP2Q86UW6 1770 aaPredicted RBP20.42■□□□□ 0.86
ERCC2-210ENST00000587376 RALBP1Q15311 655 aa20.42■□□□□ 0.86
ERCC2-210ENST00000587376 MCM10Q7L590 875 aa20.42■□□□□ 0.86
ERCC2-210ENST00000587376 MAPK8IP3Q9UPT6 1336 aa20.42■□□□□ 0.86
ERCC2-210ENST00000587376 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
ERCC2-210ENST00000587376 POLRMTO00411 1230 aaKnown RBP20.4■□□□□ 0.86
ERCC2-210ENST00000587376 DPEP1P16444 411 aa20.4■□□□□ 0.86
ERCC2-210ENST00000587376 PIM2Q9P1W9 311 aa20.4■□□□□ 0.86
ERCC2-210ENST00000587376 TM4SF1P30408 202 aa20.39■□□□□ 0.85
ERCC2-210ENST00000587376 DDR1Q08345 913 aa20.39■□□□□ 0.85
ERCC2-210ENST00000587376 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
ERCC2-210ENST00000587376 IL6STP40189 918 aaPredicted RBP20.38■□□□□ 0.85
ERCC2-210ENST00000587376 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
ERCC2-210ENST00000587376 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
ERCC2-210ENST00000587376 NFIXQ14938 502 aa20.37■□□□□ 0.85
ERCC2-210ENST00000587376 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
ERCC2-210ENST00000587376 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
ERCC2-210ENST00000587376 GPBP1L1Q9HC44 474 aaPredicted RBP20.37■□□□□ 0.85
ERCC2-210ENST00000587376 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
ERCC2-210ENST00000587376 NPHP1O15259 732 aa20.36■□□□□ 0.85
ERCC2-210ENST00000587376 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
ERCC2-210ENST00000587376 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
ERCC2-210ENST00000587376 ARHGAP27Q6ZUM4 889 aa20.36■□□□□ 0.85
ERCC2-210ENST00000587376 ATP10DQ9P241 1426 aa20.36■□□□□ 0.85
ERCC2-210ENST00000587376 SERPINB2P05120 415 aa20.35■□□□□ 0.85
ERCC2-210ENST00000587376 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
ERCC2-210ENST00000587376 KCNQ3O43525 872 aa20.34■□□□□ 0.85
ERCC2-210ENST00000587376 A1BGP04217 495 aa20.34■□□□□ 0.85
ERCC2-210ENST00000587376 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
ERCC2-210ENST00000587376 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
ERCC2-210ENST00000587376 C1QTNF8P60827 252 aa20.33■□□□□ 0.85
ERCC2-210ENST00000587376 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
ERCC2-210ENST00000587376 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
ERCC2-210ENST00000587376 ZNF526Q8TF50 670 aaPredicted RBP20.32■□□□□ 0.84
ERCC2-210ENST00000587376 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
ERCC2-210ENST00000587376 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
ERCC2-210ENST00000587376 BRCA1P38398 1863 aaKnown RBP20.31■□□□□ 0.84
ERCC2-210ENST00000587376 CHRNA5P30532 468 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 PLEKHF1Q96S99 279 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 AFDNP55196 1824 aaKnown RBP20.31■□□□□ 0.84
ERCC2-210ENST00000587376 SCN7AQ01118 1682 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 CARMIL3Q8ND23 1372 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
ERCC2-210ENST00000587376 ARFGEF1Q9Y6D6 1849 aa20.3■□□□□ 0.84
ERCC2-210ENST00000587376 H0YIN7 160 aa20.3■□□□□ 0.84
ERCC2-210ENST00000587376 KCNA3P22001 575 aa20.3■□□□□ 0.84
ERCC2-210ENST00000587376 ADCY9O60503 1353 aa20.3■□□□□ 0.84
ERCC2-210ENST00000587376 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
ERCC2-210ENST00000587376 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.844e-9■■■■■ 77.9
ERCC2-210ENST00000587376 TBC1D9BQ66K14 1250 aa20.29■□□□□ 0.84
ERCC2-210ENST00000587376 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
ERCC2-210ENST00000587376 NRXN2Q9P2S2 1712 aa20.29■□□□□ 0.84
ERCC2-210ENST00000587376 PDE6BP35913 854 aa20.28■□□□□ 0.84
ERCC2-210ENST00000587376 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
ERCC2-210ENST00000587376 ST5P78524 1137 aa20.27■□□□□ 0.84
ERCC2-210ENST00000587376 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
ERCC2-210ENST00000587376 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
ERCC2-210ENST00000587376 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
ERCC2-210ENST00000587376 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
ERCC2-210ENST00000587376 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
ERCC2-210ENST00000587376 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
ERCC2-210ENST00000587376 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
ERCC2-210ENST00000587376 CNBD1Q8NA66 436 aa20.26■□□□□ 0.83
ERCC2-210ENST00000587376 RIPK4P57078 832 aa20.25■□□□□ 0.83
ERCC2-210ENST00000587376 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
ERCC2-210ENST00000587376 LAMB4A4D0S4 1761 aa20.24■□□□□ 0.83
ERCC2-210ENST00000587376 BCORQ6W2J9 1755 aa20.23■□□□□ 0.83
ERCC2-210ENST00000587376 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
ERCC2-210ENST00000587376 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-210ENST00000587376 C9orf131Q5VYM1 1079 aa20.23■□□□□ 0.83
ERCC2-210ENST00000587376 NBPF5PQ86XG9 351 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-210ENST00000587376 ZNF622Q969S3 477 aaKnown RBP eCLIP20.23■□□□□ 0.83
ERCC2-210ENST00000587376 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
ERCC2-210ENST00000587376 DLEC1Q9Y238 1755 aa20.22■□□□□ 0.83
ERCC2-210ENST00000587376 RGL2O15211 777 aa20.22■□□□□ 0.83
ERCC2-210ENST00000587376 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
ERCC2-210ENST00000587376 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
ERCC2-210ENST00000587376 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
ERCC2-210ENST00000587376 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
ERCC2-210ENST00000587376 GTF2E1P29083 439 aaPredicted RBP20.2■□□□□ 0.82
ERCC2-210ENST00000587376 TMPOP42166 694 aaKnown RBP20.2■□□□□ 0.82
ERCC2-210ENST00000587376 TPTE2Q6XPS3 522 aa20.2■□□□□ 0.82
ERCC2-210ENST00000587376 KIF6Q6ZMV9 814 aa20.2■□□□□ 0.82
ERCC2-210ENST00000587376 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms