RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
SDF2-204ENST00000587338 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
SDF2-204ENST00000587338 NFIXQ14938 502 aa11.77□□□□□ -0.53
SDF2-204ENST00000587338 C2CD5Q86YS7 1000 aa11.77□□□□□ -0.53
SDF2-204ENST00000587338 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
SDF2-204ENST00000587338 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
SDF2-204ENST00000587338 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
SDF2-204ENST00000587338 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.53
SDF2-204ENST00000587338 ADAMTS7Q9UKP4 1686 aa11.77□□□□□ -0.53
SDF2-204ENST00000587338 POTECB2RU33 542 aa11.76□□□□□ -0.53
SDF2-204ENST00000587338 NFKBIEO00221 500 aa11.76□□□□□ -0.53
SDF2-204ENST00000587338 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
SDF2-204ENST00000587338 SOS1Q07889 1333 aaPredicted RBP11.76□□□□□ -0.53
SDF2-204ENST00000587338 DLEC1Q9Y238 1755 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
SDF2-204ENST00000587338 SERPINB2P05120 415 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 NARFQ9UHQ1 456 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 COL15A1P39059 1388 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
SDF2-204ENST00000587338 H0YIN7 160 aa11.74□□□□□ -0.53
SDF2-204ENST00000587338 FOXN1O15353 648 aa11.74□□□□□ -0.53
SDF2-204ENST00000587338 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
SDF2-204ENST00000587338 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
SDF2-204ENST00000587338 CCDC88AQ3V6T2 1871 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 SULT6B1Q6IMI4 303 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
SDF2-204ENST00000587338 C21orf2O43822 256 aa11.72□□□□□ -0.53
SDF2-204ENST00000587338 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
SDF2-204ENST00000587338 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
SDF2-204ENST00000587338 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
SDF2-204ENST00000587338 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
SDF2-204ENST00000587338 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
SDF2-204ENST00000587338 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
SDF2-204ENST00000587338 AIDAQ96BJ3 306 aa11.71□□□□□ -0.53
SDF2-204ENST00000587338 SLC52A2Q9HAB3 445 aa11.71□□□□□ -0.53
SDF2-204ENST00000587338 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
SDF2-204ENST00000587338 DDNO94850 711 aaPredicted RBP11.7□□□□□ -0.54
SDF2-204ENST00000587338 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
SDF2-204ENST00000587338 AKAP4Q5JQC9 854 aa11.7□□□□□ -0.54
SDF2-204ENST00000587338 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
SDF2-204ENST00000587338 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
SDF2-204ENST00000587338 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
SDF2-204ENST00000587338 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
SDF2-204ENST00000587338 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
SDF2-204ENST00000587338 MRC1P22897 1456 aa11.69□□□□□ -0.54
SDF2-204ENST00000587338 SLC34A2O95436 690 aa11.68□□□□□ -0.54
SDF2-204ENST00000587338 PDE6BP35913 854 aa11.68□□□□□ -0.54
SDF2-204ENST00000587338 COL11A2P13942 1736 aaPredicted RBP11.68□□□□□ -0.54
SDF2-204ENST00000587338 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 DICER1Q9UPY3 1922 aaKnown RBP11.67□□□□□ -0.54
SDF2-204ENST00000587338 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 NPHP1O15259 732 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
SDF2-204ENST00000587338 VEGFBP49765 207 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 TBC1D9BQ66K14 1250 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 PDZRN3Q9UPQ7 1066 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
SDF2-204ENST00000587338 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
SDF2-204ENST00000587338 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 A0A087WZG4 1122 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 TMEM88BA6NKF7 163 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 IL13P35225 146 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 LBX1P52954 281 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 PANK3Q9H999 370 aa11.66□□□□□ -0.54
SDF2-204ENST00000587338 STARD3NLO95772 234 aa11.65□□□□□ -0.54
SDF2-204ENST00000587338 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
SDF2-204ENST00000587338 FAM161AQ3B820 660 aa11.65□□□□□ -0.54
SDF2-204ENST00000587338 EAPPQ56P03 285 aaPredicted RBP11.65□□□□□ -0.54
SDF2-204ENST00000587338 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
SDF2-204ENST00000587338 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
SDF2-204ENST00000587338 TAF1DQ9H5J8 278 aaPredicted RBP11.65□□□□□ -0.54
SDF2-204ENST00000587338 SCN7AQ01118 1682 aa11.65□□□□□ -0.55
SDF2-204ENST00000587338 HMOX1P09601 288 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
SDF2-204ENST00000587338 SOGA3Q5TF21 947 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 ABHD8Q96I13 439 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 L3MBTL3Q96JM7 780 aaPredicted RBP11.64□□□□□ -0.55
SDF2-204ENST00000587338 WBP1LQ9NX94 342 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
SDF2-204ENST00000587338 ST5P78524 1137 aa11.63□□□□□ -0.55
SDF2-204ENST00000587338 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
SDF2-204ENST00000587338 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
SDF2-204ENST00000587338 SLX4Q8IY92 1834 aa11.63□□□□□ -0.55
SDF2-204ENST00000587338 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
SDF2-204ENST00000587338 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
SDF2-204ENST00000587338 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms