RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 SCN11AQ9UI33 1791 aa10.85□□□□□ -0.67
CAPNS1-203ENST00000586963 STARD3NLO95772 234 aa10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 NFIXQ14938 502 aa10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 COL15A1P39059 1388 aa10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
CAPNS1-203ENST00000586963 ADAMTS7Q9UKP4 1686 aa10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 SERPINB2P05120 415 aa10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 EIF5P55010 431 aaKnown RBP10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 DNAJC5GQ8N7S2 189 aa10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 TEX13AQ9BXU3 409 aaPredicted RBP10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 RNF181Q9P0P0 153 aa10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
CAPNS1-203ENST00000586963 A0A087WZG4 1122 aa10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 GNAT3A8MTJ3 354 aa10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 FSTL1Q12841 308 aa10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 C16orf71Q8IYS4 520 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 IL17REQ8NFR9 667 aa10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 ZC3H4Q9UPT8 1303 aaKnown RBP10.82□□□□□ -0.68
CAPNS1-203ENST00000586963 CANXP27824 592 aaKnown RBP10.81□□□□□ -0.68
CAPNS1-203ENST00000586963 TEFQ10587 303 aa10.81□□□□□ -0.68
CAPNS1-203ENST00000586963 ZNF790Q6PG37 636 aa10.81□□□□□ -0.68
CAPNS1-203ENST00000586963 TTLL6Q8N841 843 aa10.81□□□□□ -0.68
CAPNS1-203ENST00000586963 ARFGEF1Q9Y6D6 1849 aa10.81□□□□□ -0.68
CAPNS1-203ENST00000586963 H0YIN7 160 aa10.8□□□□□ -0.68
CAPNS1-203ENST00000586963 U2SURPO15042 1029 aaKnown RBP10.8□□□□□ -0.68
CAPNS1-203ENST00000586963 ZNF496Q96IT1 587 aaPredicted RBP10.8□□□□□ -0.68
CAPNS1-203ENST00000586963 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
CAPNS1-203ENST00000586963 HEG1Q9ULI3 1381 aa10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 LMNB1P20700 586 aa10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 IL6STP40189 918 aaPredicted RBP10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 C2CD5Q86YS7 1000 aa10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 RRAGCQ9HB90 399 aa10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
CAPNS1-203ENST00000586963 CEMIPQ8WUJ3 1361 aa10.78□□□□□ -0.68
CAPNS1-203ENST00000586963 RASSF7Q02833 373 aa10.78□□□□□ -0.68
CAPNS1-203ENST00000586963 TBC1D9BQ66K14 1250 aa10.78□□□□□ -0.68
CAPNS1-203ENST00000586963 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
CAPNS1-203ENST00000586963 BRIP1Q9BX63 1249 aa10.78□□□□□ -0.68
CAPNS1-203ENST00000586963 NRXN2Q9P2S2 1712 aa10.78□□□□□ -0.68
CAPNS1-203ENST00000586963 GLTPD2A6NH11 291 aa10.77□□□□□ -0.69
CAPNS1-203ENST00000586963 PDE6BP35913 854 aa10.77□□□□□ -0.69
CAPNS1-203ENST00000586963 PRELPP51888 382 aa10.77□□□□□ -0.69
CAPNS1-203ENST00000586963 CFAP53Q96M91 514 aa10.77□□□□□ -0.69
CAPNS1-203ENST00000586963 TBC1D2BQ9UPU7 963 aa10.77□□□□□ -0.69
CAPNS1-203ENST00000586963 UBR2Q8IWV8 1755 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 BTBD11A6QL63 1104 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 NFKBIEO00221 500 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 A1BGP04217 495 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 SMC1BQ8NDV3 1235 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 KLRG1Q96E93 195 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 PHACTR3Q96KR7 559 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 RSPH6AQ9H0K4 717 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 NUDCQ9Y266 331 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 CARMIL3Q8ND23 1372 aa10.76□□□□□ -0.69
CAPNS1-203ENST00000586963 AFDNP55196 1824 aaKnown RBP10.75□□□□□ -0.69
CAPNS1-203ENST00000586963 CAMTA2O94983 1202 aa10.75□□□□□ -0.69
CAPNS1-203ENST00000586963 PRR5LQ6MZQ0 368 aa10.75□□□□□ -0.69
CAPNS1-203ENST00000586963 JMYQ8N9B5 988 aa10.75□□□□□ -0.69
CAPNS1-203ENST00000586963 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
CAPNS1-203ENST00000586963 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
CAPNS1-203ENST00000586963 KCNQ3O43525 872 aa10.74□□□□□ -0.69
CAPNS1-203ENST00000586963 DPY19L2Q6NUT2 758 aa10.74□□□□□ -0.69
CAPNS1-203ENST00000586963 CLEC4GQ6UXB4 293 aa10.74□□□□□ -0.69
CAPNS1-203ENST00000586963 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
CAPNS1-203ENST00000586963 USP16Q9Y5T5 823 aa10.74□□□□□ -0.69
CAPNS1-203ENST00000586963 SBF1O95248 1867 aa10.74□□□□□ -0.69
CAPNS1-203ENST00000586963 PCNTO95613 3336 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 HTATSF1O43719 755 aaKnown RBP10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 C21orf2O43822 256 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 SNRPA1P09661 255 aaKnown RBP10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 HTRA3P83110 453 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 STYK1Q6J9G0 422 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 CNBD1Q8NA66 436 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 RTF1Q92541 710 aaKnown RBP10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 LTBP3Q9NS15 1303 aa10.73□□□□□ -0.69
CAPNS1-203ENST00000586963 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 POTECB2RU33 542 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 RGL2O15211 777 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 NPHP1O15259 732 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 SRGNP10124 158 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 ST5P78524 1137 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 CCDC24Q8N4L8 307 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 TNRC6CQ9HCJ0 1690 aaKnown RBP10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 DLEC1Q9Y238 1755 aa10.72□□□□□ -0.69
CAPNS1-203ENST00000586963 PPP2R1AP30153 589 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms